Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0156.Seq
         (534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   3.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.8  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   9.0  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   9.0  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 498 ASVTTSHQVDYELVHPFKEFKKNLNPISPT 409
           ASV T    +Y   H F   + + N ++PT
Sbjct: 467 ASVQTESSDNYNSFHQFYSSESSQNQVAPT 496


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = +3

Query: 27  NFMCIFFTFSLKVNNIIKSNKYVT--FHNTFTLNRFIFYNFIQLKQKERGKCRINVFGHA 200
           NFM  FF  SL++  +    K +   F+  + L++   +N    K         N++   
Sbjct: 67  NFMLTFFNVSLRIILVFSKGKVIKSFFNQGYELSKQEIFNCCSKKSFRMNFAIFNLYMVL 126

Query: 201 LII 209
           L++
Sbjct: 127 LLL 129


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 498 ASVTTSHQVDYELVHPFKEFKKNLNPISPT 409
           ASV T    +Y   H F   + + N ++PT
Sbjct: 415 ASVQTESSDNYNSFHQFYSSESSQNQVAPT 444


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = -1

Query: 300 RVYG-TPETPACRNVSPCTLHFVDVHGRHK 214
           R YG TP        +PC    +DVHG  +
Sbjct: 307 RRYGHTPNVVLDEEGNPCPDIIIDVHGTRR 336


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 471  PPGVKWLLKPIHITTS 518
            PP + W +K +  TTS
Sbjct: 1335 PPVITWKIKGVQFTTS 1350



 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 180 INVFGHALIIGIYVARGHQQSAKCMV 257
           +N +  A ++  YV RG+    KC +
Sbjct: 121 VNQYYEAEVVSEYVIRGNTAVLKCNI 146


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 381 TPEGPNSPV 407
           +P+GPNSPV
Sbjct: 39  SPQGPNSPV 47


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -3

Query: 109 VLWNVTYLFDFIILLTFRENVKKIHI 32
           +L ++ Y+   ++++TF + +KKI I
Sbjct: 276 ILESLLYMVTKLVVVTFLKFIKKIQI 301


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 486 TSHQVDYELVHPFKEFKKNLNPISPT 409
           T H  +  L  PF+   +NL+   PT
Sbjct: 541 TRHSTESSLTIPFERTFRNLDANRPT 566


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 445 LKWVDELIVH 474
           LKWV E I+H
Sbjct: 169 LKWVQENIIH 178


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 445 LKWVDELIVH 474
           LKWV E I+H
Sbjct: 169 LKWVQENIIH 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,628
Number of Sequences: 336
Number of extensions: 3266
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)