Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0156.Seq
         (534 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     27   0.52 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   2.8  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   6.4  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   6.4  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   8.5  

>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 26.6 bits (56), Expect = 0.52
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 353 TPVESYRRWDAGGTQLAGSVGEIGFKFFLN 442
           TP+  +  WD G  Q+A + G++GF  F N
Sbjct: 410 TPLRHW--WDNGNNQIAFARGDVGFVAFNN 437


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -2

Query: 263  MSHHALCTLLMSTGDINAYN---QGMSKDIYPAFSSFFL 156
            ++HH +  L  S GD+ +Y     G  +  Y  FS + L
Sbjct: 2452 LNHHFMTALGRSAGDVQSYEIDANGNHRMFYTGFSRYRL 2490


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 13/53 (24%), Positives = 21/53 (39%)
 Frame = +3

Query: 39  IFFTFSLKVNNIIKSNKYVTFHNTFTLNRFIFYNFIQLKQKERGKCRINVFGH 197
           +FF+ ++   N++  + Y  FHN    +  I      L     G     V GH
Sbjct: 328 VFFSLTICFGNVMMYSSYNRFHNNVYRDVTIVSIMDTLTSMLAGLIVFGVIGH 380


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 13/53 (24%), Positives = 21/53 (39%)
 Frame = +3

Query: 39  IFFTFSLKVNNIIKSNKYVTFHNTFTLNRFIFYNFIQLKQKERGKCRINVFGH 197
           +FF+ ++   N++  + Y  FHN    +  I      L     G     V GH
Sbjct: 328 VFFSLTICFGNVMMYSSYNRFHNNVYRDVTIVSIMDTLTSMLAGLIVFGVIGH 380


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +2

Query: 149 IKTKRKRKMQDKCLWTCPDYRHLCRPWTSTKCKVHGET 262
           +K +  + +    L    D+RH CRP T      H  T
Sbjct: 392 LKERSSKSLLANVLDIDDDFRHNCRPLTPGGTLPHNPT 429


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,747
Number of Sequences: 2352
Number of extensions: 14108
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)