Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0156.Seq
         (534 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2202|AAF58053.1| 1173|Drosophila melanogaster CG8434-PA...    31   1.3  
BT021302-1|AAX33450.1|  889|Drosophila melanogaster RE22038p pro...    29   5.3  
AE014298-1512|AAF47964.1|  889|Drosophila melanogaster CG2202-PA...    29   5.3  
BT024192-1|ABC86254.1|  786|Drosophila melanogaster RE74757p pro...    28   7.0  
AL133504-2|CAB65844.1|  819|Drosophila melanogaster EG:BACH7M4.2...    28   7.0  
AE014298-395|AAF45778.1| 1529|Drosophila melanogaster CG14045-PA...    28   7.0  
M12927-3|AAA70220.1|  479|Drosophila melanogaster unknown protei...    28   9.2  
EF591043-3|ABQ84945.1|  479|Drosophila melanogaster env protein.       28   9.2  
EF591042-3|ABQ84941.1|  479|Drosophila melanogaster env protein.       28   9.2  
BT029926-1|ABM92800.1|  563|Drosophila melanogaster IP06983p pro...    28   9.2  
AY058645-1|AAL13874.1|  850|Drosophila melanogaster LD34489p pro...    28   9.2  
AF033821-1|AAC82605.1|  483|Drosophila melanogaster gp54-SU prot...    28   9.2  
AE013599-3971|AAF47285.1|  536|Drosophila melanogaster CG30420-P...    28   9.2  
AE013599-3967|AAF47283.2|  850|Drosophila melanogaster CG30420-P...    28   9.2  

>AE013599-2202|AAF58053.1| 1173|Drosophila melanogaster CG8434-PA
            protein.
          Length = 1173

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -1

Query: 507  CVWASVTTSHQVDYELVHPFKEFKKNLNP--ISPTEP 403
            CV   ++ +   D+EL HP +E+ K   P  ISPT P
Sbjct: 905  CVLQCLSETANADFELEHPHREWFKENKPIHISPTAP 941


>BT021302-1|AAX33450.1|  889|Drosophila melanogaster RE22038p
           protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 189 FGHALIIGIYVARGHQQSAKCMVRHCDRLVFPAFHIL 299
           F H   +  ++AR H+Q+A+    HC R      H+L
Sbjct: 199 FPHLRQLRSHLARSHEQTARLQCAHCQRTFSRRDHLL 235


>AE014298-1512|AAF47964.1|  889|Drosophila melanogaster CG2202-PA
           protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 189 FGHALIIGIYVARGHQQSAKCMVRHCDRLVFPAFHIL 299
           F H   +  ++AR H+Q+A+    HC R      H+L
Sbjct: 199 FPHLRQLRSHLARSHEQTARLQCAHCQRTFSRRDHLL 235


>BT024192-1|ABC86254.1|  786|Drosophila melanogaster RE74757p
           protein.
          Length = 786

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 398 VGSLRRPSGGNSQPV*RLMEANSRKLEATTASVEYMERRKHQP 270
           V SL+R +    QP+   M   +     TT+S+E  +RR H P
Sbjct: 730 VMSLQRTTSTRIQPLANSMSRPATACSGTTSSIEAAKRRLHLP 772


>AL133504-2|CAB65844.1|  819|Drosophila melanogaster EG:BACH7M4.2
           protein.
          Length = 819

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 398 VGSLRRPSGGNSQPV*RLMEANSRKLEATTASVEYMERRKHQP 270
           V SL+R +    QP+   M   +     TT+S+E  +RR H P
Sbjct: 763 VMSLQRTTSTRIQPLANSMSRPATACSGTTSSIEAAKRRLHLP 805


>AE014298-395|AAF45778.1| 1529|Drosophila melanogaster CG14045-PA
           protein.
          Length = 1529

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 398 VGSLRRPSGGNSQPV*RLMEANSRKLEATTASVEYMERRKHQP 270
           V SL+R +    QP+   M   +     TT+S+E  +RR H P
Sbjct: 766 VMSLQRTTSTRIQPLANSMSRPATACSGTTSSIEAAKRRLHLP 808


>M12927-3|AAA70220.1|  479|Drosophila melanogaster unknown protein
           protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +3

Query: 72  IIKSNKYVTFHNTFTLNRFIFYNFIQLKQKERGKCR---INVFGHALIIGI 215
           +I+    VTF  T T+N   F N  +   K+ G  R   +N+ GH  ++ I
Sbjct: 346 LIEGTYLVTFERTATINGSEFVNLRKTLSKQPGIVRSPLLNIVGHDPVLSI 396


>EF591043-3|ABQ84945.1|  479|Drosophila melanogaster env protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +3

Query: 72  IIKSNKYVTFHNTFTLNRFIFYNFIQLKQKERGKCR---INVFGHALIIGI 215
           +I+    VTF  T T+N   F N  +   K+ G  R   +N+ GH  ++ I
Sbjct: 346 LIEGTYLVTFERTATINGSEFVNLRKTLSKQPGIVRSPLLNIVGHDPVLSI 396


>EF591042-3|ABQ84941.1|  479|Drosophila melanogaster env protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +3

Query: 72  IIKSNKYVTFHNTFTLNRFIFYNFIQLKQKERGKCR---INVFGHALIIGI 215
           +I+    VTF  T T+N   F N  +   K+ G  R   +N+ GH  ++ I
Sbjct: 346 LIEGTYLVTFERTATINGSEFVNLRKTLSKQPGIVRSPLLNIVGHDPVLSI 396


>BT029926-1|ABM92800.1|  563|Drosophila melanogaster IP06983p
           protein.
          Length = 563

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 2   FFLFIYNI*FYVYFLYILPKGQQYYKI 82
           FFLFIYN  FY+    + P G   Y +
Sbjct: 514 FFLFIYNKNFYIVESVLSPAGNTEYPV 540


>AY058645-1|AAL13874.1|  850|Drosophila melanogaster LD34489p
           protein.
          Length = 850

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -2

Query: 425 TLFHRLNRRVGSLRRPSGGNSQPV*RLMEANSRKLEATTASVEYMERRKHQPVAMSHHA 249
           T FH  ++    +  P+ G + P   +  +  RKL A +A + + + +K Q +AM + A
Sbjct: 666 TWFHNRHKAAADVEYPAYGVTGPNKDVSPSGDRKL-AQSAQMYHYQHQKQQIIAMENQA 723


>AF033821-1|AAC82605.1|  483|Drosophila melanogaster gp54-SU
           protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +3

Query: 72  IIKSNKYVTFHNTFTLNRFIFYNFIQLKQKERGKCR---INVFGHALIIGI 215
           +I+    VTF  T T+N   F N  +   K+ G  R   +N+ GH  ++ I
Sbjct: 350 LIEGTYLVTFERTATINGSEFVNLRKTLSKQPGIVRSPLLNIVGHDPVLSI 400


>AE013599-3971|AAF47285.1|  536|Drosophila melanogaster CG30420-PB,
           isoform B protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -2

Query: 425 TLFHRLNRRVGSLRRPSGGNSQPV*RLMEANSRKLEATTASVEYMERRKHQPVAMSHHA 249
           T FH  ++    +  P+ G + P   +  +  RKL A +A + + + +K Q +AM + A
Sbjct: 352 TWFHNRHKAAADVEYPAYGVTGPNKDVSPSGDRKL-AQSAQMYHYQHQKQQIIAMENQA 409


>AE013599-3967|AAF47283.2|  850|Drosophila melanogaster CG30420-PA,
           isoform A protein.
          Length = 850

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -2

Query: 425 TLFHRLNRRVGSLRRPSGGNSQPV*RLMEANSRKLEATTASVEYMERRKHQPVAMSHHA 249
           T FH  ++    +  P+ G + P   +  +  RKL A +A + + + +K Q +AM + A
Sbjct: 666 TWFHNRHKAAADVEYPAYGVTGPNKDVSPSGDRKL-AQSAQMYHYQHQKQQIIAMENQA 723


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,765,815
Number of Sequences: 53049
Number of extensions: 559615
Number of successful extensions: 1329
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)