Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0152.Seq
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA...    31   1.7  
AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC...    31   1.7  
AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical...    31   1.7  
AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p pro...    29   5.3  
AE014134-1841|AAF52916.2|  842|Drosophila melanogaster CG5034-PA...    29   5.3  
AB055143-1|BAB21556.1|  352|Drosophila melanogaster GATA factor ...    29   5.3  
AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-P...    29   7.0  
AE013599-3301|AAF46781.2|  408|Drosophila melanogaster CG13495-P...    28   9.3  

>AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA,
           isoform A protein.
          Length = 984

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 409 DKSLHQLRTAMHHHPPNQE 353
           ++ +H L TAM HHP NQ+
Sbjct: 211 EQQIHSLETAMEHHPSNQQ 229


>AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC,
           isoform C protein.
          Length = 1526

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 219 TPPGVQNLWFPGSCPPSHCSNVGGSLDDIFTVRTRAVSNRLRTSNFR 79
           TPP +   W P S  P H        D +F  R R + N+L    F+
Sbjct: 527 TPPPITGRWIPPSLRPQHGLTQSEKNDAVFR-RVRGILNKLTPEKFQ 572


>AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1526

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 219 TPPGVQNLWFPGSCPPSHCSNVGGSLDDIFTVRTRAVSNRLRTSNFR 79
           TPP +   W P S  P H        D +F  R R + N+L    F+
Sbjct: 527 TPPPITGRWIPPSLRPQHGLTQSEKNDAVFR-RVRGILNKLTPEKFQ 572


>AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p
           protein.
          Length = 598

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 258 APPGVEPAA*FDSTREISPGPDTGRIDRLTALS 356
           APP   P A   S+++I   P  G +D LTA S
Sbjct: 540 APPETAPLAVSASSKDIKGAPSIGALDTLTATS 572


>AE014134-1841|AAF52916.2|  842|Drosophila melanogaster CG5034-PA
           protein.
          Length = 842

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -3

Query: 171 SHCSNVGGSLDDIFTVRTRAVSNRLRTSNFRS*L--MKTPLANAFADVLLRRSKN 13
           S CS++  +  D  T R     + L  + F+  +   +TP A A  D+L RR K+
Sbjct: 757 SSCSSIETTKQDFLTARESLAISGLVLNKFKKEIDDTETPAAAALKDILSRRKKS 811


>AB055143-1|BAB21556.1|  352|Drosophila melanogaster GATA factor d
           protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -3

Query: 171 SHCSNVGGSLDDIFTVRTRAVSNRLRTSNFRS*L--MKTPLANAFADVLLRRSKN 13
           S CS++  +  D  T R     + L  + F+  +   +TP A A  D+L RR K+
Sbjct: 267 SSCSSIETTKQDFLTARESLAISGLVLNKFKKEIDDTETPAAAALKDILSRRKKS 321


>AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-PA
           protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 258 APPGVEPAA*FDSTREISPGPDTGRIDRLTALS 356
           APP   P A   S+++I   P  G +D LTA S
Sbjct: 540 APPETVPLAVSASSKDIKGAPSIGALDTLTATS 572


>AE013599-3301|AAF46781.2|  408|Drosophila melanogaster CG13495-PA
           protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 360 IKKELLICQSFRCPGLVRFPVLSQIKPQAPLLVVPSVNSFKFQLC 226
           I+K +L+  +F C  ++++ +LS I PQ  L     +  F   LC
Sbjct: 147 IRKIILLYSAFLCSTVLQYQLLSVINPQIFLAFCARLTHFLHFLC 191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,986,726
Number of Sequences: 53049
Number of extensions: 699640
Number of successful extensions: 1861
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1860
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)