Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0151.Seq
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.9  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   9.1  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 182 LLLSLDVLYEIMAMKCQIPHETLFRKHLL 96
           ++L L+V+Y + A  C I    +F + LL
Sbjct: 355 IILGLNVVYVVTAWICAITKRDMFVEFLL 383


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 182 LLLSLDVLYEIMAMKCQIPHETLFRKHLL 96
           ++L L+V+Y + A  C I    +F + LL
Sbjct: 80  IILGLNVVYVVTAWICAITKRDMFVEFLL 108


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 277 TRNSLWHLHDGNN 315
           T N+ WH ++GNN
Sbjct: 371 TSNNRWHNNNGNN 383


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = +1

Query: 376 CEEDNKEYDKFDYEQLLANSTF------CIVARG 459
           CE+   +YD  + +++LA+         CI+ RG
Sbjct: 16  CEQYTTKYDNINVDEILASERLLKNYFNCIMDRG 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,698
Number of Sequences: 336
Number of extensions: 3765
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)