Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0151.Seq
(667 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73425-6|CAB61014.1| 382|Caenorhabditis elegans Hypothetical pr... 131 4e-31
U94834-1|AAC47509.1| 378|Caenorhabditis elegans multiple exosto... 131 4e-31
AB241458-1|BAF48989.1| 382|Caenorhabditis elegans heparan sulfa... 131 4e-31
Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical pr... 35 0.045
U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exosto... 35 0.045
AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfa... 35 0.045
AL132860-9|CAB60524.1| 647|Caenorhabditis elegans Hypothetical ... 30 1.3
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 29 2.2
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 29 2.2
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 29 2.2
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 29 2.2
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 29 2.2
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 29 2.2
AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger t... 29 2.2
Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical ... 29 3.9
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z93396-1|CAB07709.1| 875|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical pr... 27 9.1
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 27 9.1
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL032623-14|CAA21518.1| 593|Caenorhabditis elegans Hypothetical... 27 9.1
>Z73425-6|CAB61014.1| 382|Caenorhabditis elegans Hypothetical
protein F12F6.3 protein.
Length = 382
Score = 131 bits (317), Expect = 4e-31
Identities = 52/91 (57%), Positives = 75/91 (82%)
Frame = +1
Query: 235 SLQRKKIVHGIGSETRNSLWHLHDGNNLILVTTCRHGKSWKDLRDERCEEDNKEYDKFDY 414
S + K+ V+GIGS TRN + HLH+G+++++VTTC+H W+ +D+RC+ DN EYD+++Y
Sbjct: 203 SFKGKRYVYGIGSGTRNLVHHLHNGDDIVMVTTCKHNNDWQVYQDDRCQRDNDEYDRWEY 262
Query: 415 EQLLANSTFCIVARGRRLGSYRFLEALAAGC 507
++LLANSTFC+V RGRRLGS+RFLE L +GC
Sbjct: 263 DELLANSTFCLVPRGRRLGSFRFLETLRSGC 293
Score = 93.9 bits (223), Expect = 9e-20
Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RNHLIFNLYAGTWPDYAEDSLGFDPGEAILARASASEIMFREGFDISLPLFHKEHP-EKG 178
RNHLIFN Y GT+PDY + +L FD GEA++ARAS+SE F + FD+SLPLFH+ HP E
Sbjct: 124 RNHLIFNFYHGTFPDYDDHNLNFDTGEAMIARASSSENNFIKVFDVSLPLFHENHPYEIK 183
Query: 179 GVPPAATVNPFPAQRKHLVAFKGKR 253
+ QRK+LV+FKGKR
Sbjct: 184 ESKSERNDDRIENQRKYLVSFKGKR 208
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +3
Query: 510 PVLLSNGWRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERILALRQ 659
PV++S+ W LPF E IDW A I ER L +PEL+ S R+ LR+
Sbjct: 295 PVVISDSWILPFSETIDWNSAAIVVAERDALSIPELLMSTSRRRVKELRE 344
>U94834-1|AAC47509.1| 378|Caenorhabditis elegans multiple exostoses
homolog 1 protein.
Length = 378
Score = 131 bits (317), Expect = 4e-31
Identities = 52/91 (57%), Positives = 75/91 (82%)
Frame = +1
Query: 235 SLQRKKIVHGIGSETRNSLWHLHDGNNLILVTTCRHGKSWKDLRDERCEEDNKEYDKFDY 414
S + K+ V+GIGS TRN + HLH+G+++++VTTC+H W+ +D+RC+ DN EYD+++Y
Sbjct: 199 SFKGKRYVYGIGSGTRNLVHHLHNGDDIVMVTTCKHNNDWQVYQDDRCQRDNDEYDRWEY 258
Query: 415 EQLLANSTFCIVARGRRLGSYRFLEALAAGC 507
++LLANSTFC+V RGRRLGS+RFLE L +GC
Sbjct: 259 DELLANSTFCLVPRGRRLGSFRFLETLRSGC 289
Score = 93.9 bits (223), Expect = 9e-20
Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RNHLIFNLYAGTWPDYAEDSLGFDPGEAILARASASEIMFREGFDISLPLFHKEHP-EKG 178
RNHLIFN Y GT+PDY + +L FD GEA++ARAS+SE F + FD+SLPLFH+ HP E
Sbjct: 120 RNHLIFNFYHGTFPDYDDHNLNFDTGEAMIARASSSENNFIKVFDVSLPLFHENHPYEIK 179
Query: 179 GVPPAATVNPFPAQRKHLVAFKGKR 253
+ QRK+LV+FKGKR
Sbjct: 180 ESKSERNDDRIENQRKYLVSFKGKR 204
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +3
Query: 510 PVLLSNGWRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERILALRQ 659
PV++S+ W LPF E IDW A I ER L +PEL+ S R+ LR+
Sbjct: 291 PVVISDSWILPFSETIDWNSAAIVVAERDALSIPELLMSTSRRRVKELRE 340
>AB241458-1|BAF48989.1| 382|Caenorhabditis elegans heparan sulfate
polymerase protein.
Length = 382
Score = 131 bits (317), Expect = 4e-31
Identities = 52/91 (57%), Positives = 75/91 (82%)
Frame = +1
Query: 235 SLQRKKIVHGIGSETRNSLWHLHDGNNLILVTTCRHGKSWKDLRDERCEEDNKEYDKFDY 414
S + K+ V+GIGS TRN + HLH+G+++++VTTC+H W+ +D+RC+ DN EYD+++Y
Sbjct: 203 SFKGKRYVYGIGSGTRNLVHHLHNGDDIVMVTTCKHNNDWQVYQDDRCQRDNDEYDRWEY 262
Query: 415 EQLLANSTFCIVARGRRLGSYRFLEALAAGC 507
++LLANSTFC+V RGRRLGS+RFLE L +GC
Sbjct: 263 DELLANSTFCLVPRGRRLGSFRFLETLRSGC 293
Score = 93.9 bits (223), Expect = 9e-20
Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 RNHLIFNLYAGTWPDYAEDSLGFDPGEAILARASASEIMFREGFDISLPLFHKEHP-EKG 178
RNHLIFN Y GT+PDY + +L FD GEA++ARAS+SE F + FD+SLPLFH+ HP E
Sbjct: 124 RNHLIFNFYHGTFPDYDDHNLNFDTGEAMIARASSSENNFIKVFDVSLPLFHENHPYEIK 183
Query: 179 GVPPAATVNPFPAQRKHLVAFKGKR 253
+ QRK+LV+FKGKR
Sbjct: 184 ESKSERNDDRIENQRKYLVSFKGKR 208
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +3
Query: 510 PVLLSNGWRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERILALRQ 659
PV++S+ W LPF E IDW A I ER L +PEL+ S R+ LR+
Sbjct: 295 PVVISDSWILPFSETIDWNSAAIVVAERDALSIPELLMSTSRRRVKELRE 344
>Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical
protein K01G5.6 protein.
Length = 814
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 510 PVLLSNGWRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERILALRQ 659
P++LSN LPF + IDWRRA L + +V+S I+ +R+
Sbjct: 360 PIILSNSQLLPFQDLIDWRRATYRLPLARLPEAHFIVQSFEISDIIEMRR 409
>U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exostoses
homolog 2 protein.
Length = 814
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 510 PVLLSNGWRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERILALRQ 659
P++LSN LPF + IDWRRA L + +V+S I+ +R+
Sbjct: 360 PIILSNSQLLPFQDLIDWRRATYRLPLARLPEAHFIVQSFEISDIIEMRR 409
>AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfate
GlcNAc transferase-I/II protein.
Length = 814
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 510 PVLLSNGWRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERILALRQ 659
P++LSN LPF + IDWRRA L + +V+S I+ +R+
Sbjct: 360 PIILSNSQLLPFQDLIDWRRATYRLPLARLPEAHFIVQSFEISDIIEMRR 409
>AL132860-9|CAB60524.1| 647|Caenorhabditis elegans Hypothetical
protein Y56A3A.12a protein.
Length = 647
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 79 TWVKSQRIFSIVWPS 35
TW SQRIFS++WP+
Sbjct: 8 TWSPSQRIFSLIWPA 22
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 637 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGYIQLLR 491
SGG+ RTS G +++ Q +R QS+F G+ H + S T LLR
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLR 532
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 637 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGYIQLLR 491
SGG+ RTS G +++ Q +R QS+F G+ H + S T LLR
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLR 532
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 637 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGYIQLLR 491
SGG+ RTS G +++ Q +R QS+F G+ H + S T LLR
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLR 532
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 637 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGYIQLLR 491
SGG+ RTS G +++ Q +R QS+F G+ H + S T LLR
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLR 532
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 637 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGYIQLLR 491
SGG+ RTS G +++ Q +R QS+F G+ H + S T LLR
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLR 532
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 637 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGYIQLLR 491
SGG+ RTS G +++ Q +R QS+F G+ H + S T LLR
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLR 532
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 637 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGYIQLLR 491
SGG+ RTS G +++ Q +R QS+F G+ H + S T LLR
Sbjct: 44 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLR 90
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 637 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGYIQLLR 491
SGG+ RTS G +++ Q +R QS+F G+ H + S T LLR
Sbjct: 509 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLR 555
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 637 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGYIQLLR 491
SGG+ RTS G +++ Q +R QS+F G+ H + S T LLR
Sbjct: 509 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLR 555
>AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 781
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 637 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGYIQLLR 491
SGG+ RTS G +++ Q +R QS+F G+ H + S T LLR
Sbjct: 66 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLR 112
>Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical
protein C38H2.1 protein.
Length = 863
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 280 RNSLWHLHDGNNLILVTTCR--HGKSWKDLRDERCEEDNKEYDKFDY 414
R L HL D LI C K WK R E EE+ KE+ K Y
Sbjct: 494 RTHLLHLVDTKTLICDDDCDPVDEKFWKQARAEPTEENEKEFLKRVY 540
>AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical
protein ZC416.1 protein.
Length = 139
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 280 RNSLWHLHDGNNLILVTTCRHGKS-WKDLRDERCEEDNKE 396
RNS W+ N L TT H K+ WK LRD +E+ KE
Sbjct: 77 RNSAWNEIAEN---LETTSEHVKTRWKTLRDRYKKEEKKE 113
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 403 CHILYCPLHIFHLLNLSKIFHDGKWLLRSSYFHHVNATKNYGFHYQY 263
C + CPL +L + IFHD K+ + H N ++YG+ Y
Sbjct: 136 CEAMLCPLERVQVLLQTTIFHD-KF---KNTLHTFNRLRDYGYREYY 178
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 403 CHILYCPLHIFHLLNLSKIFHDGKWLLRSSYFHHVNATKNYGFHYQY 263
C + CPL +L + IFHD K+ + H N ++YG+ Y
Sbjct: 45 CEAMLCPLERVQVLLQTTIFHD-KF---KNTLHTFNRLRDYGYREYY 87
>Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical
protein ZK829.7 protein.
Length = 372
Score = 27.9 bits (59), Expect = 6.8
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +2
Query: 14 IFNLYAGTW---PDYAEDSLGFDPGEAILARASASEIMFREGFDISLPLFHKEHPEKGGV 184
+ NL AG PDY + D A+L + S SE+ R ++ P + + GGV
Sbjct: 307 LVNLIAGGQIDAPDYRVYPV--DQASAVLKQLSMSEVEGRAILEVCDPSSALDADQSGGV 364
Query: 185 P-PAAT 199
P PAAT
Sbjct: 365 PIPAAT 370
>Z93396-1|CAB07709.1| 875|Caenorhabditis elegans Hypothetical
protein ZC15.1 protein.
Length = 875
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/80 (25%), Positives = 33/80 (41%)
Frame = -1
Query: 508 YIQLLRLQEICRILIVFLVQQCKKLS*LTTAHNQTCHILYCPLHIFHLLNLSKIFHDGKW 329
Y++ R++ I RI + Q K + L +A C + I F D K
Sbjct: 227 YVKTSRIKSIERIQKAAITGQLKYATYLDSADTLICQRVRERADI---AGWGPFFDDDKQ 283
Query: 328 LLRSSYFHHVNATKNYGFHY 269
R +++H++N N HY
Sbjct: 284 FPRLAFYHYINNRTNAPVHY 303
>Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical
protein K09E4.4 protein.
Length = 715
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 139 NVKSLTKHYFGSTCSGQYSFTW 74
N +S YFG+ C+ YSF W
Sbjct: 129 NFESKQIRYFGNMCTFSYSFAW 150
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +1
Query: 271 SETRNSLWHLHDGNNLILVTTCRHGKSWKDLRDERCEEDNKEYDKFDYEQLLANSTFCIV 450
S T +S H+GN+ T K K +RD ++ + D + Y ++ST
Sbjct: 328 STTTSSRKKKHNGNSGFNSTPPNDKKKGKSIRDVDMDDGDDSDDDYSYRD-TSSSTIEDQ 386
Query: 451 ARGRRLGSYRFLEALAA 501
RG + RF+ + AA
Sbjct: 387 RRGGGISIIRFIFSSAA 403
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 406 TCHILYCPLHIFHLLNLSKIFH--DGKWLLRSSYFHHVNATKNYGFHYQYHVQ 254
T + Y P+H+ H+ NL+K+F+ D K L + V+A G H + ++
Sbjct: 1126 TTSLDYQPVHVGHVKNLAKLFNKPDEKPLTTEQVIYRVSAAPP-GHHLEPEIK 1177
>AL032623-14|CAA21518.1| 593|Caenorhabditis elegans Hypothetical
protein Y43F8B.14 protein.
Length = 593
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 307 GNNLILVTTCRHGKSWKDLRDERCEEDNKEYDKFD 411
G L++V T SWK L + E+D+ D FD
Sbjct: 278 GKTLLVVPTTDAMTSWKKLLESLLEKDDLSIDYFD 312
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,462,836
Number of Sequences: 27780
Number of extensions: 333919
Number of successful extensions: 971
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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