Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0150.Seq
(736 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 32 0.42
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 32 0.42
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 31 0.73
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 30 2.2
SB_11958| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_44561| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17) 29 5.2
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 29 5.2
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5) 29 5.2
SB_43315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_23144| Best HMM Match : Biotin_lipoyl (HMM E-Value=9.8) 28 6.8
SB_2463| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_25612| Best HMM Match : Cadherin (HMM E-Value=0.034) 28 9.0
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 28 9.0
SB_6584| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.01) 28 9.0
SB_49433| Best HMM Match : DUF1327 (HMM E-Value=3.1) 28 9.0
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 28 9.0
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -3
Query: 317 TDEGSKTAEVSKTADDENNANMQKKVREKVITVM 216
T +GS++ E +D++N N++KK+REK + M
Sbjct: 1222 TSDGSESDEAPVPREDDDNENLEKKLREKALLSM 1255
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -1
Query: 631 KEAKPISPELY-CEICKTSMTCSEQMTMHLNGKRHLTK 521
K P +LY CEIC + + Q H GK HL K
Sbjct: 544 KRKAPSDNKLYICEICHVELNSASQAFQHFQGKAHLGK 581
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 631 KEAKPISPELYCEICKTSMTCSEQMTMHLNGKRHLTK 521
K + P+ +C +CK Q H +GK HLT+
Sbjct: 611 KPGSHLDPDTHCPLCKKWFNSRVQADSHYSGKAHLTQ 647
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 631 KEAKPISPELY-CEICKTSMTCSEQMTMHLNGKRH 530
K K + +LY CE C ++ +QM+ HL G RH
Sbjct: 688 KLGKNVKTQLYTCEPCNITLNSQKQMSQHLLGLRH 722
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 607 ELYCEICKTSMTCSEQMTMHLNGKRH 530
+ YC+ C SM +QM H+ RH
Sbjct: 781 QYYCQDCDISMNSIKQMEQHMTSARH 806
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = -3
Query: 485 SENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDE 309
S+ E+K+K P+K+ + ND + + A K +D+ ++++ + E D +I +E
Sbjct: 3290 SKEEEKKKIPLKKITRKVPNDREISSYLREARKKVDMKRRLEVIERDWGESDEDDINEE 3348
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 31.5 bits (68), Expect = 0.73
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 428 NDETAADCIIVANKAI-DVDTAIDLLTQAIDEEDVAEITDEGSKTAEVSKTADD 270
N A D I+V N D+DTAI L+ +D+ D D + ++VS +DD
Sbjct: 499 NTNLANDIILVVNDIFNDIDTAISFLSMNLDDLDDPYFLD-AAYLSDVSSNSDD 551
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -3
Query: 494 KCGSENE-KKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEI 318
KC SE + ++ K +EK E+ D+TA++ + + ++VD + ++ + D E
Sbjct: 1576 KCESEKKVEESKDENPEEKIEEKKDDTASEKKESSEEKMEVDGEEQKVEKSPESVDKTE- 1634
Query: 317 TDEGSKTAEVSKTADDEN 264
E + + K ADD N
Sbjct: 1635 GHERTDVEDDEKKADDSN 1652
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -3
Query: 494 KCGSENE-KKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEI 318
KC SE + ++ K +EK E+ D+TA++ + + ++VD + ++ + D E
Sbjct: 155 KCESEKKVEESKDENPEEKIEEKKDDTASEKKESSEEKMEVDGEEQKVEKSPESVDKTE- 213
Query: 317 TDEGSKTAEVSKTADDEN 264
E + + K ADD N
Sbjct: 214 GHERTDVEDDEKKADDSN 231
>SB_11958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = -3
Query: 506 LKMMKCGSENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDL----LTQAID 339
+++++ G+E + Q + E N+E A C + + +DV D+ +T ID
Sbjct: 224 VRIVEVGNEEDMAQ-CDMTVRIVEVGNEEDMAQCDMTV-RIVDVGNEEDMAQCDMTVRID 281
Query: 338 EEDVAEITDEGSKTAEVSKTADDE 267
E +I EG T + + +DE
Sbjct: 282 EVSNDDIIAEGDMTVRIVEVGNDE 305
>SB_44561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -3
Query: 500 MMKCGSENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLL 354
M+KCG E + + KT + DETA A KA V + L+
Sbjct: 1 MLKCGLEKHSSIHTYISRAKTGPNKDETAVHGCRTARKAFFVLLLVALI 49
>SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 28.7 bits (61), Expect = 5.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +3
Query: 78 VAFCSYGIPCCIPPFKVLHQGHLPSCRF 161
+ F + + CI P ++ + H+PSC++
Sbjct: 994 IDFGNVSLDVCIAPIMIIIENHIPSCKY 1021
>SB_3932| Best HMM Match : Spectrin (HMM E-Value=5.2e-17)
Length = 1426
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -3
Query: 362 DLLTQAIDEE-DVAEITDEGSKTAEVSKTADDENNANMQKKVR 237
D+++Q +D++ +V ++ DEG+K + + DDE QK ++
Sbjct: 759 DVVSQLMDKQIEVNDVIDEGNKFLDDTSIGDDERGDIHQKMMK 801
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Frame = -3
Query: 482 ENEKKQKAPVKQEKTE--KSNDETAADCIIVANKAIDVDT--AIDLLTQAIDEEDVAEIT 315
E E K K K+ TE S+D++++D + K T + + DEE+V
Sbjct: 49 EEEVKPKKDAKKAATEDSSSDDDSSSDEEVKVKKDTKKATKGSSSEDDSSSDEEEVKPKK 108
Query: 314 DEGSKTAEVSKTADDENNANMQKKVREKV 228
D E S + DD + + +K ++KV
Sbjct: 109 DAKKAATEDSSSDDDSSGEDEDEKPKKKV 137
>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 205
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/95 (23%), Positives = 50/95 (52%)
Frame = -3
Query: 476 EKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKT 297
E++++ ++E+TE+ +E + + + D +++T DE ++ DE +++
Sbjct: 94 EEEEQTEEEEEQTEEEEEEEEKE------EGKEEDGEEEVVT---DERGISSSKDESNES 144
Query: 296 AEVSKTADDENNANMQKKVREKVITVMLVMLRNRR 192
E +++ DE+N + + E +T MLV R+ R
Sbjct: 145 DESNES--DESNESDESNGSELAVTDMLVTTRSGR 177
>SB_43315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 916
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 401 IVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSK 300
I +A+D D ++LL +A D+ED+ + DEG +
Sbjct: 51 IATLRALD-DEILELLVEAEDDEDLEKFLDEGDE 83
>SB_23144| Best HMM Match : Biotin_lipoyl (HMM E-Value=9.8)
Length = 929
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -3
Query: 416 AADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAEVSKTADDENNAN 255
A+D V+N A D D D+ A D +DV+ + +G ++ S DD +N +
Sbjct: 271 ASDGDDVSNGASDGD---DVSNVASDGDDVSNVASDGDDVSDGSSDGDDVSNGS 321
>SB_2463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 398 VANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAEVSKTADDENNAN 255
++NK ID D ID + D E++++G T EVS D + +
Sbjct: 386 MSNKGIDTDEGIDTDEVSNKGVDTDEVSNKGVDTDEVSNKGIDTDEVS 433
>SB_25612| Best HMM Match : Cadherin (HMM E-Value=0.034)
Length = 177
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
Frame = -3
Query: 488 GSENEKKQKAPVKQEKTEKSNDETA------ADCIIVANK------AIDVDTAIDLLTQA 345
G +NE +KAP K+ + +K D+ A + + NK +D T + +Q
Sbjct: 70 GEDNESAKKAPGKKRQAQKKTDKAAKNPANKEENVSEENKWPSSRSTVDPHTGVLRTSQR 129
Query: 344 IDEEDVAEIT 315
+D E V E T
Sbjct: 130 LDRETVTEYT 139
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 598 CEICKTSMTCSEQMTMHLNGKRHL 527
C++CK MHL+GK+H+
Sbjct: 359 CKVCKIMCNKEHAFRMHLHGKKHV 382
>SB_6584| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.01)
Length = 742
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -2
Query: 723 QKSMEGRLEQLIRREKKNLKPIEEIQENEVERKLSQYHRSCIVKYARL 580
++S G L L R K+ + + + +NEV RKL YH + VK+ R+
Sbjct: 75 KRSRSGCLGSLRRFRKEIEELMYKGNKNEVSRKLQSYHNTW-VKFVRV 121
>SB_49433| Best HMM Match : DUF1327 (HMM E-Value=3.1)
Length = 728
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/78 (19%), Positives = 38/78 (48%)
Frame = -3
Query: 485 SENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEG 306
S++E + P+ E K N + + ++ + + D ++++ E++ +G
Sbjct: 361 SQDEPSPQGPMT-EMLPKGNTDVVTTLVTDFSEGLTITPVPDPVSESKSASLGEEVSQKG 419
Query: 305 SKTAEVSKTADDENNANM 252
+K+ + DD+N+AN+
Sbjct: 420 TKSRLEIGSEDDDNHANL 437
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = -3
Query: 476 EKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKT 297
E++Q PVKQ++ E + DE + N+ + A+D + I+EE +E K
Sbjct: 563 EEQQDEPVKQDEQE-NRDEP-----VEQNEQEKQEKALDAVQNIINEELRMAAAEERKKE 616
Query: 296 AEVSKTADDENNANMQKKVREK 231
E K D+ ++++ E+
Sbjct: 617 IENKKKEIDDEMRKLEEERTER 638
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,305,547
Number of Sequences: 59808
Number of extensions: 295356
Number of successful extensions: 1237
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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