Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0150.Seq
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   1.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.4  
AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.            24   5.6  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   7.4  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    23   9.8  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
 Frame = +3

Query: 144 LPSCRFRCPN--RNRLRPPSVPQH 209
           LPSCR  CPN        P+ P+H
Sbjct: 101 LPSCRLPCPNLIPRPAEVPTTPEH 124


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 645 ENEVERKLSQYHRSCIVKYAR 583
           E E++RKL Q HR   ++ AR
Sbjct: 401 EEEIDRKLRQDHRRFTIRMAR 421


>AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 624 ASFQLHFLEFLLWVSDSSSRDG 689
           ASF+ +FLE  LW +D     G
Sbjct: 116 ASFRTNFLESWLWKTDKIGSSG 137


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = -1

Query: 610 PELYCEICKTSMTCSEQMT--MHLNGKRH 530
           P+ YC+ C T +T         H  G++H
Sbjct: 2   PKYYCDYCDTYLTHDSPSVRKTHCTGRKH 30


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -3

Query: 482 ENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAI 342
           +N ++ K  +K  +  + N  T  DC+   +     D  IDL+ QA+
Sbjct: 187 KNFQQTKGRLKFVRLREYNIHTNPDCVYENDLKDCSDDMIDLVPQAV 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,395
Number of Sequences: 2352
Number of extensions: 10989
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)