Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0150.Seq
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13642-2|AAG00042.2|  430|Caenorhabditis elegans Abnormal growth...    34   0.12 
AY052773-1|AAL14112.1|  430|Caenorhabditis elegans tRNA isopente...    34   0.12 
Z78536-4|CAB01718.3|  194|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z49887-6|CAA90059.3|  194|Caenorhabditis elegans Hypothetical pr...    33   0.16 
L14429-1|AAA28219.2|  575|Caenorhabditis elegans Hypothetical pr...    33   0.28 
U41534-6|AAB47598.1|  375|Caenorhabditis elegans Hypothetical pr...    32   0.37 
Z75550-12|CAA99920.2|  356|Caenorhabditis elegans Hypothetical p...    32   0.48 
U13071-1|AAL65794.1|  462|Caenorhabditis elegans Hypothetical pr...    31   0.85 
AL117195-17|CAB60767.1|  534|Caenorhabditis elegans Hypothetical...    30   1.5  
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ...    30   2.0  
AC024817-3|AAK68524.1|  482|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z93389-5|CAI79177.1|  212|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U70857-11|AAN84874.1|  295|Caenorhabditis elegans Hypothetical p...    29   3.4  
U70857-10|AAB09175.1|  385|Caenorhabditis elegans Hypothetical p...    29   3.4  
U29488-7|AAA68771.1|  221|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF078790-14|AAC26930.1|  335|Caenorhabditis elegans Hypothetical...    28   6.0  
Z49068-9|CAA88860.1|  556|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF016449-5|AAG23995.1|  343|Caenorhabditis elegans Serpentine re...    28   7.9  

>U13642-2|AAG00042.2|  430|Caenorhabditis elegans Abnormal growth
           rate protein 1 protein.
          Length = 430

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 604 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 512
           L CEIC  SMT  +    H++GK+H    KQ
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQ 422


>AY052773-1|AAL14112.1|  430|Caenorhabditis elegans tRNA isopentenyl
           transferase protein.
          Length = 430

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 604 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 512
           L CEIC  SMT  +    H++GK+H    KQ
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQ 422


>Z78536-4|CAB01718.3|  194|Caenorhabditis elegans Hypothetical
           protein F09B9.4 protein.
          Length = 194

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 24/98 (24%), Positives = 43/98 (43%)
 Frame = -3

Query: 509 LLKMMKCGSENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEED 330
           L+ M   G +  KKQK   +QE  + +++      +  + KA D      +L     E+ 
Sbjct: 16  LVSMSDAGKDRRKKQKQKERQEDDDNNDEPAGGSEMGESGKAKDEKERTSVL-----EKQ 70

Query: 329 VAEITDEGSKTAEVSKTADDENNANMQKKVREKVITVM 216
             +  D+ S ++E  K  +DE   N    +R K  T++
Sbjct: 71  AGKKGDDESSSSEEDKEDEDEKKDNSTVIIRVKRHTML 108


>Z49887-6|CAA90059.3|  194|Caenorhabditis elegans Hypothetical
           protein F09B9.4 protein.
          Length = 194

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 24/98 (24%), Positives = 43/98 (43%)
 Frame = -3

Query: 509 LLKMMKCGSENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEED 330
           L+ M   G +  KKQK   +QE  + +++      +  + KA D      +L     E+ 
Sbjct: 16  LVSMSDAGKDRRKKQKQKERQEDDDNNDEPAGGSEMGESGKAKDEKERTSVL-----EKQ 70

Query: 329 VAEITDEGSKTAEVSKTADDENNANMQKKVREKVITVM 216
             +  D+ S ++E  K  +DE   N    +R K  T++
Sbjct: 71  AGKKGDDESSSSEEDKEDEDEKKDNSTVIIRVKRHTML 108


>L14429-1|AAA28219.2|  575|Caenorhabditis elegans Hypothetical
           protein ZK652.6a protein.
          Length = 575

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = -3

Query: 485 SENEKKQKAPVKQEKTEKSNDETAADCI--IVANKAIDVDTAIDLLTQAIDEEDVAEITD 312
           S +E  Q A    +++E  ND    D +  IV ++A+  D     L   I EEDV  I +
Sbjct: 286 SGDETPQPAADSADESEDDNDIQELDDMQPIVEDEALKKDEFWKTLKTRISEEDVDLILE 345

Query: 311 EGSKTAEVSKTADDE 267
               TA+V +  DD+
Sbjct: 346 TMKSTAKVKEDIDDK 360


>U41534-6|AAB47598.1|  375|Caenorhabditis elegans Hypothetical
           protein C16A3.4 protein.
          Length = 375

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 625 AKPISPELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 512
           A  + P LYC+ C+ S+     MT H+  K+H   EK+
Sbjct: 65  AASVEP-LYCKACRKSIKSENAMTDHVASKKHKENEKK 101


>Z75550-12|CAA99920.2|  356|Caenorhabditis elegans Hypothetical
           protein T22C1.1 protein.
          Length = 356

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = -3

Query: 413 ADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAEVSKTADDENNANMQKKV 240
           ADC+ V   A D +  +D      DE+D+A    E  K  E +KT +D+    M K++
Sbjct: 248 ADCVRVYEMA-DCEFLLD------DEDDIATFDSESRKKVEENKTTEDDEMREMVKQI 298


>U13071-1|AAL65794.1|  462|Caenorhabditis elegans Hypothetical
           protein T22F7.5 protein.
          Length = 462

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +3

Query: 69  RIPVAFCSYGIPCCIPPFKVLHQGHLPSCRFRCPNRNRLRPPSVPQHY 212
           R+P+ F    +P    P K   QGH    +  CPN    R  S P+ Y
Sbjct: 388 RVPMLFPQNNMPLVCNPVKGCPQGHTCINKMCCPNGRVKRSESCPRGY 435


>AL117195-17|CAB60767.1|  534|Caenorhabditis elegans Hypothetical
           protein Y57A10A.24 protein.
          Length = 534

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 81  AFCSYGIPCCIPPFKVLHQGHLPSCRFRC-PNRNRLRP 191
           AFC  GI CC+PP +  H  +  S  F C P R    P
Sbjct: 68  AFCHRGI-CCVPPPQCRHPAYRMSTGFPCLPKRKNNCP 104


>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
           protein ZC123.3 protein.
          Length = 1623

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 598 CEICKTSMTCSEQMTMHLNGKRHLTKEKQ 512
           CE+C  +    E    HLN  RHL + K+
Sbjct: 534 CEMCSETFATKEAFLSHLNSARHLQQAKK 562


>AC024817-3|AAK68524.1|  482|Caenorhabditis elegans Hypothetical
           protein Y54G2A.11a protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
 Frame = -3

Query: 485 SENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDE--EDVAEITD 312
           ++NE  +  P+ +E     +D+TA++    +    D D+  D L+++  E  E   E  +
Sbjct: 33  TDNEAAEPEPIVEEPPSSDDDDTASE---KSFSDSDSDSDSDSLSESESEISEPEEEEAE 89

Query: 311 EGSKTAEVSKTADDENNANMQKK 243
           EG+  AE+ + +D+E    ++++
Sbjct: 90  EGA-AAEILENSDNEGEDEVEEE 111


>Z93389-5|CAI79177.1|  212|Caenorhabditis elegans Hypothetical
           protein T13F3.8 protein.
          Length = 212

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/84 (22%), Positives = 38/84 (45%)
 Frame = -3

Query: 482 ENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGS 303
           + EK +K P + ++ EK ++    +      K  + +   +   + + EE+  + +    
Sbjct: 70  KEEKVEKKPEENKEAEKKDEPKKEEEKKEEEKKKE-EKKEEEKKEEVKEEEKKDDSKRDE 128

Query: 302 KTAEVSKTADDENNANMQKKVREK 231
           K  +  K  DDEN  + +KK  EK
Sbjct: 129 KKKDGEKKEDDENKEDNEKKKEEK 152


>U70857-11|AAN84874.1|  295|Caenorhabditis elegans Hypothetical
           protein C10G8.8b protein.
          Length = 295

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
 Frame = -3

Query: 482 ENEKKQKAPVKQEKT--EKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDE 309
           E E+ ++ P  +++   E  + E   D         + + A +  T+A + +D     + 
Sbjct: 200 EQEELEEEPKSEDEVDVEDHDQEECQDQRTETQTPKNSEPAQEEETRAEESKDKENTENS 259

Query: 308 GSKTAEVSKTADDENNANMQKKVREKVITV 219
                E S+   +++N N+   VREKV+T+
Sbjct: 260 DETKEESSEDVKEDSNQNVISLVREKVVTM 289


>U70857-10|AAB09175.1|  385|Caenorhabditis elegans Hypothetical
           protein C10G8.8a protein.
          Length = 385

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
 Frame = -3

Query: 482 ENEKKQKAPVKQEKT--EKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDE 309
           E E+ ++ P  +++   E  + E   D         + + A +  T+A + +D     + 
Sbjct: 290 EQEELEEEPKSEDEVDVEDHDQEECQDQRTETQTPKNSEPAQEEETRAEESKDKENTENS 349

Query: 308 GSKTAEVSKTADDENNANMQKKVREKVITV 219
                E S+   +++N N+   VREKV+T+
Sbjct: 350 DETKEESSEDVKEDSNQNVISLVREKVVTM 379


>U29488-7|AAA68771.1|  221|Caenorhabditis elegans Hypothetical
           protein C56C10.3 protein.
          Length = 221

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -3

Query: 419 TAADCIIVANKAIDVDTAIDLLTQAIDEEDVA-EITDEGSKTAEVSKTADDEN 264
           TA+  +  A+  +D+D   DL+    ++++VA EI +  S     S   DD++
Sbjct: 108 TASKALKAAHNNMDIDQVHDLMEDIAEQQEVANEIAEAISNPVGFSTAVDDDD 160


>AF078790-14|AAC26930.1|  335|Caenorhabditis elegans Hypothetical
           protein F36H12.3 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/84 (22%), Positives = 39/84 (46%)
 Frame = -3

Query: 482 ENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGS 303
           E +K++K   K++K E+  +E   D      K    D   +       +ED  E  D+  
Sbjct: 87  EEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKK 146

Query: 302 KTAEVSKTADDENNANMQKKVREK 231
           +  +  K +D++++ + +KK  +K
Sbjct: 147 EDKKDDKKSDNKDDKDDEKKEEKK 170


>Z49068-9|CAA88860.1|  556|Caenorhabditis elegans Hypothetical
           protein K01C8.9 protein.
          Length = 556

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = -3

Query: 518 ETALLKMMKCGSENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAID 339
           E+ + K  K G+E +KK  +  + EK    +D+T         K +++    D++ Q +D
Sbjct: 100 ESMVAKASKQGTEFDKKVASAAEHEKFNTLDDKTIKAYASEVRKTVEI---ADVIIQVLD 156

Query: 338 EED 330
             D
Sbjct: 157 ARD 159


>AF016449-5|AAG23995.1|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein185 protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -2

Query: 678 KKNLKPIEEIQENEVERKLSQYHR 607
           ++N+  +EEIQEN V   ++++HR
Sbjct: 312 RQNMSSVEEIQENSVCPVVAEFHR 335


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,045,395
Number of Sequences: 27780
Number of extensions: 225230
Number of successful extensions: 1165
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)