Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0150.Seq
(736 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19380.1 68415.m02260 RNA recognition motif (RRM)-containing ... 34 0.11
At3g01015.1 68416.m00001 expressed protein ; expression supporte... 31 1.0
At2g19385.1 68415.m02261 expressed protein weak similarity to Ce... 31 1.0
At2g15345.1 68415.m01755 expressed protein 31 1.0
At5g23890.1 68418.m02806 expressed protein weak similarity to SP... 30 1.8
At3g03130.1 68416.m00309 expressed protein ; expression supporte... 30 1.8
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 29 2.4
At5g61180.1 68418.m07675 hypothetical protein contains Pfam prof... 29 3.2
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 29 3.2
At2g38440.1 68415.m04721 expressed protein 29 3.2
At4g37730.1 68417.m05342 bZIP transcription factor family protei... 29 4.2
At4g35720.1 68417.m05069 expressed protein contains Pfam profile... 29 4.2
At1g62740.1 68414.m07081 stress-inducible protein, putative simi... 29 4.2
At5g56850.2 68418.m07093 expressed protein 28 5.6
At5g56850.1 68418.m07094 expressed protein 28 5.6
At4g17695.1 68417.m02643 myb family transcription factor (KAN3) ... 28 5.6
At3g13480.1 68416.m01696 expressed protein ; expression supporte... 28 5.6
At2g24030.2 68415.m02870 expressed protein and genefinder 28 5.6
At2g24030.1 68415.m02871 expressed protein and genefinder 28 5.6
At2g19240.1 68415.m02246 RabGAP/TBC domain-containing protein lo... 28 7.4
At1g72440.1 68414.m08377 CCAAT-box-binding transcription factor-... 28 7.4
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 28 7.4
At1g11950.1 68414.m01381 transcription factor jumonji (jmjC) dom... 28 7.4
At5g54910.1 68418.m06839 DEAD/DEAH box helicase, putative 27 9.8
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 27 9.8
At2g46240.1 68415.m05750 IQ domain-containing protein / BAG doma... 27 9.8
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 27 9.8
At1g68370.1 68414.m07809 gravity-responsive protein / altered re... 27 9.8
>At2g19380.1 68415.m02260 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM); contains Pfam profile PF00096:
Zinc finger, C2H2 type
Length = 613
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 625 AKPISPELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 512
A+ + + +C +C +MTC + H+ GK+H K +
Sbjct: 78 AELFNSQWFCSLCNATMTCEQDYFAHVYGKKHQEKANE 115
Score = 31.9 bits (69), Expect = 0.45
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 601 YCEICKTSMTCSEQMTMHLNGKRH 530
+C +C TC + + H NG++H
Sbjct: 225 FCSLCNVKATCQQNLLSHANGRKH 248
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 601 YCEICKTSMTCSEQMTMHLNGKRHLTK 521
+C +C + T + + H NGK+H K
Sbjct: 155 FCSLCDINATSEQTLLAHANGKKHRVK 181
>At3g01015.1 68416.m00001 expressed protein ; expression supported
by MPSS
Length = 488
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/113 (17%), Positives = 44/113 (38%)
Frame = -3
Query: 455 VKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAEVSKTA 276
VK+ ++ ND + DC A ++ + + + + + +E+ +++
Sbjct: 83 VKKNSRKEKNDSASVDCKCGAKTISNMKKCVCIAYETLRASQEEFFNNRRESVSEIGESS 142
Query: 275 DDENNANMQKKVREKVITVMLVMLRNRRRXXXXXXXXXXXXXXKMPLVKNFER 117
+ + N Q + + T + +M R R + M LVK FE+
Sbjct: 143 QNLEDGNEQVEFGDSDETRVSLMKRRREKVLEEARMSIPEFGKVMHLVKAFEK 195
>At2g19385.1 68415.m02261 expressed protein weak similarity to Cell
growth regulating nucleolar protein (Swiss-Prot:Q08288)
[Mus musculus]
Length = 275
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 601 YCEICKTSMTCSEQMTMHLNGKRHLTKEK 515
+C +C T T + + H +GK+H K K
Sbjct: 96 FCSLCNTKATSQQTLLAHADGKKHRGKAK 124
>At2g15345.1 68415.m01755 expressed protein
Length = 121
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 699 EQLIRREKKNLKPIEEIQENEVERKLSQYHRSCIVKY 589
+Q R KNL+ I+ + E KL +Y+RSC+ +Y
Sbjct: 10 QQTERLGYKNLEMIKGLDRTENYSKLKKYYRSCVKEY 46
>At5g23890.1 68418.m02806 expressed protein weak similarity to
SP|P12957 Caldesmon (CDM) {Gallus gallus}
Length = 946
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = -3
Query: 485 SENEKKQKA---PVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEIT 315
S+ KKQ+ +QE +S+DE ++D I VAN ++ + ++I+ DVA+ +
Sbjct: 117 SKRTKKQEMHSLTSQQESMIQSSDEISSDEIKVANSE---ESNLKDEDKSIESNDVAQKS 173
Query: 314 DEGS 303
DEGS
Sbjct: 174 DEGS 177
>At3g03130.1 68416.m00309 expressed protein ; expression supported
by MPSS
Length = 520
Score = 29.9 bits (64), Expect = 1.8
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = -3
Query: 506 LKMMKCGSENE---KKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDE 336
L+ CGSE + ++APV +KT S+ ++ ++ A +L D+
Sbjct: 406 LEENSCGSEESIEIESEEAPVSDKKTPASSSSSSL-AGNETRTSLSPFEAESILESEEDK 464
Query: 335 EDVAEITDEGSKTAEVSKTADDENNANMQKKVREKVITVML 213
E EG AEV KT + K V + +T M+
Sbjct: 465 EMAVNNNGEGKAEAEVKKTKKKKTIDEELKDVSMRQLTKMV 505
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = -3
Query: 434 KSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAE 291
K + A+ ++ N+ IDVD +++LL A++EE+ + + + K ++
Sbjct: 418 KISPADVAENLMARNQQIDVDKSLNLLISALEEENQYQRSQQEKKKSK 465
>At5g61180.1 68418.m07675 hypothetical protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 346
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 601 YCEICKTSMTCSEQMTMHLNGKRH 530
+CE+C S + + +T HL+G+RH
Sbjct: 286 FCELCNVSCS-NHDLTAHLSGRRH 308
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Frame = -3
Query: 503 KMMKCGSENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVA 324
K + S+ E K++ P K+EK + S+ E + + NK + ++ + I E ++
Sbjct: 338 KKEESSSQGEGKEEEPEKREKEDSSSQEESKE-EEPENKEKEASSSQE--ENEIKETEIK 394
Query: 323 E----ITDEGSKTAEVSKTADD---ENNANMQKKVRE 234
E + EG++ E K + + + N N +KK+ +
Sbjct: 395 EKEESSSQEGNENKETEKKSSESQRKENTNSEKKIEQ 431
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = -3
Query: 488 GSENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDE 309
G+EN++ +K + ++ E +N E K V++ TQ DE+ E E
Sbjct: 404 GNENKETEKKSSESQRKENTNSE---------KKIEQVESTDSSNTQKGDEQKTDESKRE 454
Query: 308 GSKTAEVSKTADDENNANMQKK 243
+T DD + +KK
Sbjct: 455 SGNDTSNKETEDDSSKTESEKK 476
>At2g38440.1 68415.m04721 expressed protein
Length = 1399
Score = 29.1 bits (62), Expect = 3.2
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Frame = -3
Query: 428 NDETAADCIIVANKAIDVD---TAIDLLTQA----ID-EEDVAEITDEGS----KTAEVS 285
+DET DC+ V N +DVD + D+ +Q+ ID + VAEI+DE S TA+VS
Sbjct: 717 DDET--DCVSVTNVVVDVDSKNSVADVGSQSSVADIDSQSSVAEISDEHSCAFGNTADVS 774
Query: 284 KTADDEN 264
+ E+
Sbjct: 775 VSESHED 781
>At4g37730.1 68417.m05342 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 305
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = -3
Query: 428 NDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAEVSKTADDENNANMQ 249
+DE+ A + + + D D + DL DE D +D+ + ++ ENN N +
Sbjct: 131 SDESCAGFVKINPRCDDADISNDLPCSQADEPD----SDDTKQLTAITNFGSGENNHNRK 186
Query: 248 KKVREKV 228
K ++ ++
Sbjct: 187 KMIQPEM 193
>At4g35720.1 68417.m05069 expressed protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function
Length = 325
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/93 (20%), Positives = 47/93 (50%)
Frame = -3
Query: 473 KKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTA 294
K K ++ EK + ET C+++ ++ + ++T+ D+E+ +I++E S+
Sbjct: 226 KLVKKGIEHHHQEKRDYETGFSCLVLEAMESELGKLVVMMTRE-DQEEEKKISEEVSERV 284
Query: 293 EVSKTADDENNANMQKKVREKVITVMLVMLRNR 195
+ + + A M+ ++ E + + VM++ R
Sbjct: 285 QCALVRSEGVEAAME-ELEEGLEGLFKVMIQAR 316
>At1g62740.1 68414.m07081 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 571
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -3
Query: 482 ENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQA--IDEEDVAEITDE 309
E E + + +EK +K + + A K D +TAI + A ID+ED++ IT+
Sbjct: 224 EPEPEPEPEFGEEKQKKLKAQKEKELGNAAYKKKDFETAIQHYSTAMEIDDEDISYITNR 283
Query: 308 GSKTAEVSK 282
+ E+ K
Sbjct: 284 AAVHLEMGK 292
>At5g56850.2 68418.m07093 expressed protein
Length = 413
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -3
Query: 398 VANKAIDVDTA-IDLLTQAIDEEDVAEITDEGSKTAEVSKTADDENNANMQKKVREK 231
+ + +D+D A +LL + IDE I + GS+ ++K + N+++ ++K
Sbjct: 322 LGTRHLDLDLAEANLLQKRIDESTRENIGERGSRCINIAKINSNNKWTNIERSKKQK 378
>At5g56850.1 68418.m07094 expressed protein
Length = 551
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -3
Query: 398 VANKAIDVDTA-IDLLTQAIDEEDVAEITDEGSKTAEVSKTADDENNANMQKKVREK 231
+ + +D+D A +LL + IDE I + GS+ ++K + N+++ ++K
Sbjct: 460 LGTRHLDLDLAEANLLQKRIDESTRENIGERGSRCINIAKINSNNKWTNIERSKKQK 516
>At4g17695.1 68417.m02643 myb family transcription factor (KAN3)
contains Pfam profile: PF00249 myb-like DNA-binding
domain; identical to cDNA GARP-like putative
transcription factor KANADI3 (KAN3) GI:15723596
Length = 322
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2
Query: 687 RREKKNLKPIEEIQENEVERKL 622
RRE++ K +E+QE EVER+L
Sbjct: 17 RREEEQEKESQELQEQEVERRL 38
>At3g13480.1 68416.m01696 expressed protein ; expression supported
by MPSS
Length = 205
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = -3
Query: 437 EKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAEVSKTADDENNA 258
++ +D+ D V + + VD LLT+ + EED A EG K E S + + +
Sbjct: 47 DRDHDDNDDDDAHVEEEEVVVDHVDGLLTEVVREEDCAL---EGKKEEEESLSNGEILKS 103
Query: 257 NMQKKV 240
+++K+V
Sbjct: 104 SLKKEV 109
>At2g24030.2 68415.m02870 expressed protein and genefinder
Length = 374
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 607 ELYCEICKTSMTCSEQMTMHLNGKRH 530
+ +CEICK C M H GK+H
Sbjct: 212 KFWCEICKVGTYCQIVMRDHELGKKH 237
>At2g24030.1 68415.m02871 expressed protein and genefinder
Length = 455
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 607 ELYCEICKTSMTCSEQMTMHLNGKRH 530
+ +CEICK C M H GK+H
Sbjct: 293 KFWCEICKVGTYCQIVMRDHELGKKH 318
>At2g19240.1 68415.m02246 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 840
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 494 KCGSENEKKQKAPVKQEKTEKSNDETAADCIIVANK 387
K G K +PV Q E S+++ DC + NK
Sbjct: 525 KLGIGERKANSSPVTQSLLEDSSEQLNVDCHVTVNK 560
>At1g72440.1 68414.m08377 CCAAT-box-binding transcription
factor-related similar to CCAAT-box-binding transcription
factor (CCAAT-binding factor) (CBF) (Swiss-Prot:Q03701)
[Homo sapiens], GB:P53569 [Mus musculus]
Length = 1056
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = -3
Query: 434 KSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAEVSKTADDENNAN 255
+ ++E AD V++ +D D +DL ID+ED + D+G+ + D+ +
Sbjct: 950 EDDEELVAD---VSDAEMDTDMDMDL----IDDEDDNNVDDDGTGDGGDDDSDGDDGRSK 1002
Query: 254 MQKKVREK 231
+KK + K
Sbjct: 1003 KKKKEKRK 1010
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = -3
Query: 485 SENEKKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEG 306
+E +K ++ ++EKTE+ +ET + + K + ++A E +E E
Sbjct: 125 TEEKKTEEETKEEEKTEEKKEETTTEVKVEEEKPAVPAAEEEKSSEAAPVETKSEEKPEE 184
Query: 305 SKTAEVSKTAD-DENNANMQKKVREKVITV 219
K + +E+ + + E +++V
Sbjct: 185 KAEVTTEKASSAEEDGTKTVEAIEESIVSV 214
>At1g11950.1 68414.m01381 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain; non-consensus TG acceptor splice site at
exon boundary 79262
Length = 880
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 494 KCGSENEKKQKAPVKQEKTEKSNDETAAD 408
KC ENEKKQ++ VK+ T +E D
Sbjct: 85 KC-EENEKKQRSSVKKRATTWKEEEVVVD 112
>At5g54910.1 68418.m06839 DEAD/DEAH box helicase, putative
Length = 739
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = -3
Query: 407 CIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAEVSKTADD-----ENNANMQKK 243
C V + +D D A+D + Q EDVA +TA + M +K
Sbjct: 373 CTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEEKMIEK 432
Query: 242 VREKVITVMLVMLRNRR 192
++E + + L+ N++
Sbjct: 433 LQEAKVPIKLIKANNQK 449
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 431 SNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAE-ITDEGSKTAEVSKTADDENNAN 255
S ++ A + N AID DT +L ++ E ++ +TD K + + D+E++
Sbjct: 241 STEKEAETTMEAGNAAIDDDTDETMLVASLVESSESQHLTDSEGKCDDAKVSNDEESSVG 300
Query: 254 MQKKVREKVI 225
K + +I
Sbjct: 301 DVKSDKSDII 310
>At2g46240.1 68415.m05750 IQ domain-containing protein / BAG
domain-containing protein contains Pfam profiles PF00612:
IQ calmodulin-binding motif, PF02179: BAG (Apoptosis
regulator Bcl-2 protein) domain
Length = 1043
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = -3
Query: 509 LLKMMKCGSENEKKQKAPVKQEKTEKSNDETAA---DCIIVANKAIDVDT----AIDLLT 351
+++ + S + + + V + +T S +E D ++ + K +++ ID T
Sbjct: 825 MVEETETNSIRDPENASEVSEAETNSSENENRKGEDDIVLHSEKNVELSELPVGVIDEET 884
Query: 350 QAIDEEDVAEITDEGSKTAEVSKTADDE 267
Q + ++ + T EG+ TA KTA E
Sbjct: 885 QPLSQDPSSSYTREGNMTAMDPKTASQE 912
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 628 EAKPISPELYCEICKTSMTCSEQMTMHLNGKRHLTK 521
+AK + +LYC +C +Q H K+H K
Sbjct: 300 DAKRKNEQLYCIVCSKKFKSEKQWKNHEQSKKHKEK 335
>At1g68370.1 68414.m07809 gravity-responsive protein / altered
response to gravity protein (ARG1) identical to Altered
Response to Gravity [Arabidopsis thaliana] GI:4249662;
contains Pfam profile PF00226 DnaJ domain
Length = 410
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 449 QEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAEVSK 282
QE+ EK+ T+A + + +DT ++ L A D E EG + EVS+
Sbjct: 201 QEEREKTGKVTSAGMYFLHFQVYRMDTTVNALAAAKDPESAFFKRLEGLQPCEVSE 256
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,137,240
Number of Sequences: 28952
Number of extensions: 204489
Number of successful extensions: 1016
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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