Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0149.Seq
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69883-5|CAA93739.2| 260|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z78060-1|CAB01491.1| 83|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical... 43 2e-04
AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical ... 39 0.003
Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z78060-2|CAB01490.1| 114|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative tran... 38 0.006
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 36 0.024
U97001-3|AAB52258.2| 449|Caenorhabditis elegans Hypothetical pr... 35 0.041
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 34 0.095
Z73905-5|CAD44103.1| 175|Caenorhabditis elegans Hypothetical pr... 34 0.095
AF535153-1|AAN17799.1| 175|Caenorhabditis elegans putative tran... 34 0.095
AC024848-5|AAK68545.1| 254|Caenorhabditis elegans Hypothetical ... 34 0.095
Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.17
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 33 0.17
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 33 0.17
Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 32 0.29
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 32 0.38
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 31 0.51
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 31 0.67
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 31 0.88
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 31 0.88
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 30 1.2
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 30 1.2
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 30 1.5
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 30 1.5
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 30 1.5
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 30 1.5
AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical ... 30 1.5
AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical ... 30 1.5
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 2.0
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 2.0
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 29 2.0
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 29 2.0
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 2.0
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 2.0
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 29 2.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 2.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 2.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 2.7
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 2.7
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 2.7
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical pr... 29 3.6
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 29 3.6
U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna synt... 29 3.6
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 29 3.6
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 29 3.6
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 29 3.6
AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA sy... 29 3.6
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 28 4.7
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 28 4.7
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 28 4.7
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 28 4.7
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 28 4.7
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 28 4.7
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 4.7
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 4.7
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 4.7
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 4.7
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 6.2
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 6.2
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 28 6.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 6.2
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 27 8.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 8.2
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 27 8.2
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 27 8.2
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 27 8.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 27 8.2
U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor... 27 8.2
U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein. 27 8.2
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 27 8.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 27 8.2
AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen prot... 27 8.2
>Z69883-5|CAA93739.2| 260|Caenorhabditis elegans Hypothetical
protein C27C12.6 protein.
Length = 260
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +2
Query: 164 PNCARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
P CARCRNH L LKGHKR+CKY+ C CE L
Sbjct: 20 PKCARCRNHGLVSWLKGHKRHCKYKECACEKCNL 53
>U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical
protein F10C1.5 protein.
Length = 280
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 164 PNCARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
P CARCRNH LKGHKRYC+++ C C L
Sbjct: 31 PKCARCRNHGTTSALKGHKRYCQWKDCMCAKCTL 64
>Z78060-1|CAB01491.1| 83|Caenorhabditis elegans Hypothetical
protein C34D1.1 protein.
Length = 83
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 164 PNCARCRNHRLKIELKGHKRYCKYQHCTC 250
PNC +C H K LKGHKR C ++ C C
Sbjct: 38 PNCQKCGQHGRKSRLKGHKRSCPFRECPC 66
>AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical
protein Y43F8C.10 protein.
Length = 250
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +2
Query: 107 DCXERSEPGASSSGVPRAP-------PNCARCRNHRLKIELKGHKRYCKYQHCTC 250
+C +SE SSG + PNC RC H + LKGHKR C ++ C C
Sbjct: 89 ECTSQSETTNESSGEDKDDGKPKERRPNCQRCAQHSVVNRLKGHKRACPFRDCFC 143
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 170 CARCRNHRLKIELKGHKRYCKYQHCTCESAALPQTGSG*WQSKRQSDGPR 319
C RC NH L+ + K HK C ++ C C + + + Q DG R
Sbjct: 19 CQRCLNHGLREKRKNHKLSCTFRFCQCSNCIMVERRRQLNSRLMQIDGSR 68
>AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical
protein T22H9.4 protein.
Length = 369
Score = 39.1 bits (87), Expect = 0.003
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 170 CARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
C +C+NH + + K HK+ C+Y C C+ L
Sbjct: 137 CQKCKNHNVLVWKKNHKKECQYSSCECQQCNL 168
Score = 33.9 bits (74), Expect = 0.095
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 167 NCARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
+C C+ H + +E +GH C+Y+ C CE L
Sbjct: 50 HCGMCKQHGVFVETRGHT--CEYRSCECEQCDL 80
>Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical
protein Y53C12B.5a protein.
Length = 290
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 164 PNCARCRNHRLKIELKGHKR-YCKYQHCTCESAAL 265
P+CARC H + + L+GHKR C++ C C L
Sbjct: 92 PHCARCSAHGVLVPLRGHKRTMCQFVTCECTLCTL 126
Score = 33.9 bits (74), Expect = 0.095
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 170 CARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
C RC NH KGHK C+Y C C +
Sbjct: 28 CQRCLNHGELKPRKGHKPDCRYLKCPCRECTM 59
>Z78060-2|CAB01490.1| 114|Caenorhabditis elegans Hypothetical
protein C34D1.2 protein.
Length = 114
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2
Query: 170 CARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
C RC NH + K HK C Y CTCE L
Sbjct: 43 CQRCLNHDVPRPRKNHKCECPYADCTCEKCGL 74
>AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative
transcription factor MAB-3 protein.
Length = 290
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 164 PNCARCRNHRLKIELKGHKR-YCKYQHCTCESAAL 265
P+CARC H + + L+GHKR C++ C C L
Sbjct: 92 PHCARCSAHGVLVPLRGHKRTMCQFVTCECTLCTL 126
Score = 33.9 bits (74), Expect = 0.095
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 170 CARCRNHRLKIELKGHKRYCKYQHCTCESAAL 265
C RC NH KGHK C+Y C C +
Sbjct: 28 CQRCLNHGELKPRKGHKPDCRYLKCPCRECTM 59
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP + PP K P+ P PP P G A D PG+PG
Sbjct: 136 RPPQQPCEPITPPPCKPCPQGPAGPPGPPGPAGDAGSDGSPGAPG 180
>U97001-3|AAB52258.2| 449|Caenorhabditis elegans Hypothetical
protein K08B12.2a protein.
Length = 449
Score = 35.1 bits (77), Expect = 0.041
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 170 CARCRNHRLKIELKGHKRYCKYQHCTCES 256
C +C H ++ LKGH C + +C+C++
Sbjct: 61 CRKCEGHGQQVVLKGHASRCPFNNCSCKT 89
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.095
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP D PP + P+ P PP P G A + PGSPG
Sbjct: 131 RPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGSNGNPGSPG 175
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPGGC 360
PG PG + P + GADG G G G T GG G P C
Sbjct: 242 PGAPGPKGPNGNPGQPGADGNPGAPGQSG--TPGGVGEKGICPKYC 285
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGG 363
PG+PG + Q P +G +G G GA G + PGG
Sbjct: 233 PGQPGHDGQPGAPGPKGPNGN-PGQPGADGNPGAPGQSGTPGG 274
>Z73905-5|CAD44103.1| 175|Caenorhabditis elegans Hypothetical
protein C32C4.5a protein.
Length = 175
Score = 33.9 bits (74), Expect = 0.095
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 149 VPRAPPNCARCRNHRLKIE-LKGHKRYCKYQHCTCESAAL 265
+P+ C C NH + + KGHK+ C Y+ C C AL
Sbjct: 1 MPKEQYMCQLCANHGIFNQPKKGHKQKCPYRTCPCSLCAL 40
>AF535153-1|AAN17799.1| 175|Caenorhabditis elegans putative
transcription factor MAB-23 protein.
Length = 175
Score = 33.9 bits (74), Expect = 0.095
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 149 VPRAPPNCARCRNHRLKIE-LKGHKRYCKYQHCTCESAAL 265
+P+ C C NH + + KGHK+ C Y+ C C AL
Sbjct: 1 MPKEQYMCQLCANHGIFNQPKKGHKQKCPYRTCPCSLCAL 40
>AC024848-5|AAK68545.1| 254|Caenorhabditis elegans Hypothetical
protein Y67D8A.3 protein.
Length = 254
Score = 33.9 bits (74), Expect = 0.095
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 170 CARCRNHRLKIELKGHKRYCKYQHCTCESAA 262
C +C H LKGH C Y+ C+C + A
Sbjct: 31 CRKCEGHGTYAILKGHAGVCPYKDCSCGTCA 61
>Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical
protein F13G11.1b protein.
Length = 470
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 170 CARCRNHRLKIELKGHKRYCKYQHCTCES 256
C +C H K+ LK H C Y C C+S
Sbjct: 45 CRKCEGHGEKVILKNHSPQCPYILCNCKS 73
>Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical
protein F13G11.1a protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 170 CARCRNHRLKIELKGHKRYCKYQHCTCES 256
C +C H K+ LK H C Y C C+S
Sbjct: 85 CRKCEGHGEKVILKNHSPQCPYILCNCKS 113
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP D PP + P+ P PP P G A + PGSPG
Sbjct: 131 RPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPG 175
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPGGC 360
PG PG + P + GADG G G G T GG G P C
Sbjct: 242 PGAPGPKGPNGNPGQPGADGNPGAPGQSG--TPGGVGEKGICPKYC 285
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGG 363
PG+PG + Q P +G +G G GA G + PGG
Sbjct: 233 PGQPGHDGQPGAPGPKGPNGN-PGQPGADGNPGAPGQSGTPGG 274
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP + PP K P P PP P + G A + PG+PG
Sbjct: 136 KPPVQPCEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPG 180
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 382 DRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
D P P++ P PP P G A D PG+PG
Sbjct: 212 DAPSEPLIPGEPGPQGPPGPP---GQAGPDGQPGAPG 245
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 382 DRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
D+ +P ++ P+ P PP A G + +PG+PG
Sbjct: 175 DQEIPGCIQCPQGPQGPPGAVGPCGPSGIPGLPGNPG 211
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 364 PPGM--ELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPY 504
PPG+ + P PP P P P P G A D PG PGV+ Y
Sbjct: 259 PPGLPGQCGPPGPPGYTPPPGP---PGTPGVQGEAGQDGEPGVPGVTGY 304
>Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical
protein E01B7.1 protein.
Length = 410
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 367 PGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSV-PGSPGVSPYAHR 513
P + +PPV R PMIPPS P S A V P +P + P R
Sbjct: 348 PALNRQSTIPPVAMTQR-PMIPPSLPSSTPPAPLKPVAPPTPPIFPLLDR 396
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 364 PPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
PP D PP + P+ P PP P G A + PGSPG
Sbjct: 99 PPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPG 142
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPGGC 360
PG PG + P + GADG G G G T GG G P C
Sbjct: 209 PGAPGPKGPNGNPGQPGADGNPGAPGQSG--TPGGVGEKGICPKYC 252
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGG 363
PG+PG + Q P +G +G G GA G + PGG
Sbjct: 200 PGQPGHDGQPGAPGPKGPNGN-PGQPGADGNPGAPGQSGTPGG 241
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 394 PPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
P VK P P PP G A D PG+PG
Sbjct: 142 PSCVKCPEGPAGPPGPEGPAGPAGSDGQPGAPG 174
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 267 RRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG*ACTTSGEGA 413
RRQ+ G+ A+G + GSG +C G+ + P G +GA
Sbjct: 97 RRQSYGDSGASGGFSSGGSGGGSCCSCGVGSAGPAGSPGQDGAPGNDGA 145
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 391 VPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG--VSPYAHRRQ 519
+PPV + R M+P + RS+ S S PG G V P A R Q
Sbjct: 474 IPPVTRKVRKSMMPSESIRSVSRNSSTSTPGPRGSSVVPNAMRSQ 518
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 31.1 bits (67), Expect = 0.67
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGL-SNSIPGG 363
PG PG Q P + GA G G G RGA T G G N+ P G
Sbjct: 201 PGAPGDNGQPGFPGQDGAPGQPGADGQRGAGTPGAPGAPGNAGPAG 246
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 412 PRSPMIPPSAPRSLGSASCDSVPGSPG 492
P P PP P G VPG+PG
Sbjct: 112 PTKPTCPPGPPGPPGQPGAPGVPGAPG 138
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 31.1 bits (67), Expect = 0.67
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGL-SNSIPGG 363
PG PG Q P + GA G G G RGA T G G N+ P G
Sbjct: 185 PGAPGDNGQPGFPGQDGAPGQPGADGQRGAGTPGAPGAPGNAGPAG 230
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 412 PRSPMIPPSAPRSLGSASCDSVPGSPG 492
P P PP P G VPG+PG
Sbjct: 96 PTKPTCPPGPPGPPGQPGAPGVPGAPG 122
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1
Query: 494 TPGEPGTESQLAEPRERGADG-GIMGLRGAFTTGGTGLSNSIPG 366
TPG+PG + Q P + G G G G GA G +N PG
Sbjct: 181 TPGQPGQQGQDGRPGQNGRRGRGTPGAPGAPGAAGAPGNNGQPG 224
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGGCI 357
PG PG Q EP G D G G G +++ IPGGCI
Sbjct: 97 PGPPGEGGQSGEPGHDG-DDGKPGAPGVI----VAITHDIPGGCI 136
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGGCI 357
PG PG Q EP G D G G G +++ IPGGCI
Sbjct: 97 PGPPGEGGQSGEPGHDG-DDGKPGAPGVI----VAITHDIPGGCI 136
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPGGCI 357
PG PGT + E G DG G GL G + + +PGGCI
Sbjct: 101 PGPPGTPGEQGPQGESGPDGDDGKPGLAGEV----VAIVHDLPGGCI 143
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPGGCI 357
PG PGT + E G DG G GL G + + +PGGCI
Sbjct: 101 PGPPGTPGEQGPQGESGPDGDDGKPGLAGEV----VAIVHDLPGGCI 143
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 403 VKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPYAH 510
V+ PR P PP S+G D G+PG + H
Sbjct: 140 VQCPRGPPGPPGDVGSVGQRGPDGASGAPGAASQIH 175
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 403 VKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPYAH 510
V+ PR P PP S+G D G+PG + H
Sbjct: 140 VQCPRGPPGPPGDVGSVGQRGPDGASGAPGAASQIH 175
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG-----GIMGLRGAFTTGGTGLSNSIPGG 363
PG PG EP ++G DG GI G+ G G + +PGG
Sbjct: 219 PGRPGKVGINGEPGQKGIDGENGSEGIPGVPGPRGAPGQPGTIGVPGG 266
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 367 PGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGV 495
PGM P PP P AP GSA D + GSPG+
Sbjct: 553 PGMN-GYPGPPGPNGDHGDCGMPGAPGKPGSAGSDGLSGSPGL 594
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 494 TPGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPG 366
TPGE GT + EP E G G G G RG GT + PG
Sbjct: 173 TPGEAGTPGPVGEPGETGGPGPQGRPGQRGEPGQPGTVHTPGNPG 217
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP D PP + P PP AP S G PG PG
Sbjct: 120 RPPAQPCDPITPPPCRP--CPQGPPGAPGSPGPQGDAGAPGQPG 161
>AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical
protein Y45G12B.2b protein.
Length = 246
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 27 APTLPRIRPTRTQQ-WCRWAHGNAACPMTARSVPNPAPP 140
+P + ++R Q W R A G P R VP+PAPP
Sbjct: 49 SPLIEKLREQLKQSNWARAALGLPTLPELNRPVPSPAPP 87
>AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical
protein Y45G12B.2a protein.
Length = 309
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 27 APTLPRIRPTRTQQ-WCRWAHGNAACPMTARSVPNPAPP 140
+P + ++R Q W R A G P R VP+PAPP
Sbjct: 112 SPLIEKLREQLKQSNWARAALGLPTLPELNRPVPSPAPP 150
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP + PP P P PP AP + G + PG PG
Sbjct: 132 KPPQSPCEPLTPP--PCPACPPGPPGAPGAPGKPGSEGPPGPPG 173
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP + PP K P+ P PP P + G PG PG
Sbjct: 135 KPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPG 179
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 282 GNGKANGNQTGPGSGRSACACAGI-RNTAPGDGVG*ACTTSGEGA 413
G+G+++G +G GSG S+ +G A G+G G A SGEG+
Sbjct: 78 GSGESSGETSGEGSGESSGEASGEGSGEASGEGSGEA---SGEGS 119
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 282 GNGKANGNQTGPGSGRSACACAGI-RNTAPGDGVG*ACTTSGEGA 413
G+G+++G +G GSG S+ +G A G+G G A SGEG+
Sbjct: 78 GSGESSGETSGEGSGESSGEASGEGSGEASGEGSGEA---SGEGS 119
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP D PP K P+ P P G A D PG PG
Sbjct: 129 RPPQAPCDPITPPPCKPCPQGPPGVQGPPGPAGDAGLDGQPGGPG 173
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP + PP K P+ P PP P + G PG PG
Sbjct: 135 KPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPG 179
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP + PP K P+ P PP P + G PG PG
Sbjct: 133 KPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPG 177
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
Frame = +1
Query: 388 PVPPVVKAPRSPMIPPSAPRSLGSA------SCDSVPGSPG 492
P P + P P PP AP G A D+ PGSPG
Sbjct: 146 PCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPG 186
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 355 GIQPPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVS 498
G+ PPG + +P P+ PP P G+ PGSPG S
Sbjct: 207 GMGPPGQSMSNVLP-------GPLGPPGPPGQPGNHGLAGQPGSPGQS 247
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGGC 360
PG PG + P GADG A T+GG G P C
Sbjct: 242 PGAPGPKGPNGNPGAPGADGNPGAPGQAGTSGGAGEKGICPKYC 285
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGGC 360
PG PG + P GADG A T+GG G P C
Sbjct: 242 PGAPGPKGPNGNPGAPGADGNPGAPGQAGTSGGAGEKGICPKYC 285
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 358 IQPPGMELDRPVP-PVVKAPRSPMIPPSAPRSL-GSASCDSVPGSPGVSP 501
+ PP E+ PVP P + AP P+ PP+ L G + +PGV+P
Sbjct: 143 VPPPVPEVSEPVPEPPIPAP-GPVAPPTPSGPLFGGVEPGAGALTPGVAP 191
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP + PP K P+ P PP P + G PG PG
Sbjct: 128 KPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPG 172
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
Frame = +1
Query: 388 PVPPVVKAPRSPMIPPSAPRSLGSA------SCDSVPGSPG 492
P P + P P PP AP G A D+ PGSPG
Sbjct: 141 PCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPG 181
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
PPG P PP P+ P PP G A +PG PG
Sbjct: 223 PPGP----PGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPG 261
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP + PP K P+ P PP P + G PG PG
Sbjct: 128 KPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPG 172
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
Frame = +1
Query: 388 PVPPVVKAPRSPMIPPSAPRSLGSA------SCDSVPGSPG 492
P P + P P PP AP G A D+ PGSPG
Sbjct: 141 PCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPG 181
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGGC 360
PG PG + P GADG A T+GG G P C
Sbjct: 242 PGAPGPKGPNGNPGAPGADGNPGAPGQAGTSGGAGEKGICPKYC 285
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGGC 360
PG PG + P GADG A T+GG G P C
Sbjct: 242 PGAPGPKGPNGNPGAPGADGNPGAPGQAGTSGGAGEKGICPKYC 285
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
PPG + P P P PP + GSA D PG PG
Sbjct: 182 PPGPD-GAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPG 223
>Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical
protein D2023.7 protein.
Length = 336
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPG 366
PG+PG+ P ERG G + G+RG TGG+ ++ PG
Sbjct: 155 PGKPGS------PGERGKPG-LRGMRGPRGTGGSPGTDGYPG 189
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
PPG + P P P PP + GSA D PG PG
Sbjct: 182 PPGPD-GAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPG 223
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 373 MELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPG 492
++ R P VK PR P P + G D PG PG
Sbjct: 137 IQCPRQQPGCVKCPRGPAGPTGSIGQAGRPGPDGRPGQPG 176
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGGC 360
PG PG + P GADG A T GG G P C
Sbjct: 242 PGAPGPKGPNGNPGAPGADGNPGAPGQAGTAGGAGEKGICPKYC 285
>Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical
protein W07A12.5 protein.
Length = 278
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPG 366
PG PG + + P GA G I+ + G G S +PG
Sbjct: 175 PGPPGKDGSIGAPGPDGASGKILTMEGPPGLPGVPGSVGLPG 216
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +1
Query: 367 PGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPY 504
PG P P+ P P PP P G+ D +PG G Y
Sbjct: 155 PGRCAQCPAGPM--GPPGPRGPPGVPGITGAPGLDGIPGRHGTPGY 198
>U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna
synthetase protein 1 protein.
Length = 441
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 128 PGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCESAALPQT 274
PG G + NC ++ RL I+ K KY H TC AL T
Sbjct: 350 PGRKLYGEVSSASNCTDFQSRRLGIKYKTADGTTKYAH-TCNGTALAST 397
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGGCI 357
PG PG Q P G D G G G +++ IPGGCI
Sbjct: 103 PGPPGEGGQKGNPGHDG-DDGKPGAPGVI----VAITHDIPGGCI 142
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGGCI 357
PG PG Q P G D G G G +++ IPGGCI
Sbjct: 97 PGPPGEGGQKGNPGHDG-DDGKPGAPGVI----VAITHDIPGGCI 136
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 494 TPGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPG 366
TPG PGT P G GG+ G T GG G + G
Sbjct: 35 TPGGPGTPGGPGTPGGPGTPGGLGTPGGPGTPGGPGTPETSGG 77
>AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA
synthetase protein.
Length = 441
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 128 PGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCESAALPQT 274
PG G + NC ++ RL I+ K KY H TC AL T
Sbjct: 350 PGRKLYGEVSSASNCTDFQSRRLGIKYKTADGTTKYAH-TCNGTALAST 397
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +1
Query: 394 PPVVKAPRSPMIPPSAP--RSL-GSASCDSVPGSPGVS-PYAHRRQ-CLR 528
P P P PP AP R L G PG PGV+ P +H +Q C++
Sbjct: 85 PQASNCPAGPPGPPGAPGDRGLDGQPGGAGNPGQPGVAGPKSHEQQECIK 134
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +1
Query: 367 PGMELDRPVPPVVKAPRSPMI--PPSAPRSLGSASCDSVPGSPGV 495
PG +P P+ P P PP P G PGSPG+
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP + PP K P+ P PP P G + PG PG
Sbjct: 131 RPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPG 175
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -1
Query: 494 TPGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPGGC 360
+PG PG++ + G D G G GA G + GGC
Sbjct: 252 SPGNPGSQGPQGSAGDNGGD-GFPGQPGANGDNGPDGETGVSGGC 295
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +1
Query: 367 PGMELDRPVPPVVKAPRSPMI--PPSAPRSLGSASCDSVPGSPGV 495
PG +P P+ P P PP P G PGSPG+
Sbjct: 129 PGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP + PP K P+ P PP P G + PG PG
Sbjct: 131 RPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGLPG 175
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +1
Query: 367 PGMELDRPVPPVVKAPRSPMI--PPSAPRSLGSASCDSVPGSPGV 495
PG +P P+ P P PP P G PGSPG+
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPGSPG 492
+PP + PP K P+ P PP P G + PG PG
Sbjct: 131 RPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPG 175
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 488 GEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPG 366
G PG + L EP +G + G+ G GA G N PG
Sbjct: 213 GRPGPQGPLGEPGAQG-EPGVDGKDGALGAPGRKAENGRPG 252
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 367 PGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVS 498
P + PP ++ +PP+ P+S G + S+PG+P V+
Sbjct: 361 PKSAVPSEAPPTPRSAAPSDVPPT-PKSNGHIANGSIPGTPSVA 403
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 367 PGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVS 498
P + PP ++ +PP+ P+S G + S+PG+P V+
Sbjct: 311 PKSAVPSEAPPTPRSAAPSDVPPT-PKSNGHIANGSIPGTPSVA 353
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 367 PGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVS 498
P + PP ++ +PP+ P+S G + S+PG+P V+
Sbjct: 361 PKSAVPSEAPPTPRSAAPSDVPPT-PKSNGHIANGSIPGTPSVA 403
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 367 PGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVS 498
P + PP ++ +PP+ P+S G + S+PG+P V+
Sbjct: 361 PKSAVPSEAPPTPRSAAPSDVPPT-PKSNGHIANGSIPGTPSVA 403
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVK-APRSPMIPPSAPRSLGSASCDSVPG 483
+PP + PP K P+ P P AP G A PG
Sbjct: 136 RPPAQPCEPITPPPCKPCPQGPAGAPGAPGPQGDAGAPGAPG 177
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDS--VPGSPG 492
P G + R PP AP +P +P + P G PG+PG
Sbjct: 260 PQGPGMPRAFPPGASAPVAPGMPGAFPPGQGGPGMPGSFPPGAPG 304
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPG 366
PGEPG + P E GADG G G G G N PG
Sbjct: 213 PGEPGQPGEPGGPGEPGADGRPGHPGRAGPPGPPGDNGPNGEPG 256
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 361 QPPGMELDRPVPPVVKAPRSPMIPPSAP 444
QPP + PVP + P P +PP +P
Sbjct: 152 QPPPTPIPTPVPILEPPPPPPPVPPLSP 179
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 355 GIQPPGMELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVS 498
G+ P + P PP P P PP G+ D PG+PG +
Sbjct: 199 GVPGPDGDAGSPPPP---GPPGPPGPPGNDGQPGAPGQDGQPGAPGTN 243
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPG 366
PG+PG+ +P + GA GG G +GA G + PG
Sbjct: 214 PGQPGSRGPAGQPGKDGAQGG-PGEKGANGEPGQPGRDGQPG 254
>Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical
protein E03G2.3 protein.
Length = 327
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 488 GEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPG 366
GEPG+ Q E+G +G G GL GA G+ + +PG
Sbjct: 142 GEPGSTGQPGSKGEKGMEGLPGTNGLPGAPGWPGSKGEDGLPG 184
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +3
Query: 282 GNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG*ACTTSGEGA 413
G G NGN G G+G A A G G+G G A +G GA
Sbjct: 848 GAGAGNGNGAGAGNGNGAGAGNG-NGAGAGNGNG-AGAGNGNGA 889
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +3
Query: 282 GNGKANGNQTGPGSGRSACACAGIRNTA---PGDGVG*ACTTSGEGATQPHDTA 434
GNG GN G G+G A AG N A G+G G ++ A Q A
Sbjct: 854 GNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGDASAAAAAAQAQAAA 907
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +3
Query: 282 GNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG*ACTTSGEGA 413
G G NGN G G+G A A G G+G G A +G GA
Sbjct: 825 GAGAGNGNGAGAGNGNGAGAGNG-NGAGAGNGNG-AGAGNGNGA 866
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +3
Query: 282 GNGKANGNQTGPGSGRSACACAGIRNTA---PGDGVG*ACTTSGEGATQPHDTA 434
GNG GN G G+G A AG N A G+G G ++ A Q A
Sbjct: 831 GNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGDASAAAAAAQAQAAA 884
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 364 PPGMELDRPVPPVVKAPRSPMIPPSAPRS-LGSASCDSVPGSPGVS 498
PP P P + +P P PPS + SA+ + P +P VS
Sbjct: 228 PPQQHPPPPQPQQIMSPMPPQAPPSQQATPSSSAASVAAPDTPKVS 273
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +3
Query: 282 GNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG*ACTTSGEGA 413
G G NGN G G+G A A G G+G G A +G GA
Sbjct: 478 GAGAGNGNGAGAGNGNGAGAGNG-NGAGAGNGNG-AGAGNGNGA 519
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +3
Query: 282 GNGKANGNQTGPGSGRSACACAGIRNTA---PGDGVG*ACTTSGEGATQPHDTA 434
GNG GN G G+G A AG N A G+G G ++ A Q A
Sbjct: 484 GNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGDASAAAAAAQAQAAA 537
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 430 PPSAPRSLGSASCDSVPGSPG 492
PP AP S G D PG+PG
Sbjct: 116 PPGAPGSDGEDGADGQPGAPG 136
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 430 PPSAPRSLGSASCDSVPGSPG 492
PP AP S G D PG+PG
Sbjct: 178 PPGAPGSDGEDGADGQPGAPG 198
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 394 PPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPYA 507
PP P PM PP P + C S +P + YA
Sbjct: 63 PPPPPPPPPPMCPPPPPPMPSYSPCQSYAPAPVFNQYA 100
>U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor
protein.
Length = 327
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 488 GEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPG 366
GEPG+ Q E+G +G G GL GA G+ + +PG
Sbjct: 142 GEPGSTGQPGSKGEKGMEGLPGTNGLPGAPGWPGSKGEDGLPG 184
>U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein.
Length = 327
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 488 GEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPG 366
GEPG+ Q E+G +G G GL GA G+ + +PG
Sbjct: 142 GEPGSTGQPGSKGEKGMEGLPGTNGLPGAPGWPGSKGEDGLPG 184
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Frame = +2
Query: 80 GSWKRRVPDDCXERSEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQ--HCTCE 253
G +K+R PDD R S S R PP A + K + KY+ C
Sbjct: 861 GGFKKRKPDDDASRKPRNLSESERRRQPPRDAEDNGNHYKKMNANTDQIAKYRLFAAICH 920
Query: 254 SAALPQTG 277
P G
Sbjct: 921 IGEFPDRG 928
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADGGIMGLRGAFTTGGTGLSNSIPG 366
PG+PG EP + G+ GG G +GA G + PG
Sbjct: 216 PGQPGQRGPAGEPGKDGSPGG-QGEKGASGEPGQPGRDGQPG 256
>AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen protein
72 protein.
Length = 205
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 491 PGEPGTESQLAEPRERGADG--GIMGLRGAFTTGGTGLSNSIPG 366
PGEPG E Q + G+ G GI G +G +TG G N PG
Sbjct: 94 PGEPGREGQPGKAGGPGSPGRDGIRGSKG--STGDKG-PNGPPG 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,805,076
Number of Sequences: 27780
Number of extensions: 301571
Number of successful extensions: 2625
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2485
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -