Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0147.Seq
(703 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P0AAY9 Cluster: Uncharacterized protein ybjN; n=37; Ent... 182 1e-44
UniRef50_A4SLU1 Cluster: Putative uncharacterized protein; n=2; ... 81 2e-14
UniRef50_Q0VNM1 Cluster: Putative uncharacterized protein; n=1; ... 79 8e-14
UniRef50_A4A9V6 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q2SIX5 Cluster: Putative uncharacterized protein; n=1; ... 71 4e-11
UniRef50_A4BJU4 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_Q8CKU2 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q6Y0Z5 Cluster: RGC2-like protein; n=5; Helianthus annu... 36 0.73
UniRef50_Q7Y2G8 Cluster: Putative uncharacterized protein; n=3; ... 34 2.9
UniRef50_UPI000023C9C8 Cluster: hypothetical protein FG00463.1; ... 34 3.9
UniRef50_Q3T9U6 Cluster: Activated spleen cDNA, RIKEN full-lengt... 33 5.1
UniRef50_Q6AN94 Cluster: Hypothetical membrane protein; n=1; Des... 33 6.8
UniRef50_A3JGN7 Cluster: Pseudouridylate synthases, 23S RNA-spec... 33 6.8
UniRef50_Q3UY28 Cluster: Adult male olfactory brain cDNA, RIKEN ... 33 9.0
UniRef50_Q7UW62 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q5DZ14 Cluster: ABC transporter ATP-binding protein; n=... 33 9.0
UniRef50_A5V8K3 Cluster: Rieske (2Fe-2S) domain protein; n=1; Sp... 33 9.0
UniRef50_A1G9C5 Cluster: Putative uncharacterized protein precur... 33 9.0
UniRef50_A7ASG6 Cluster: HECT/ubiquitin-transferase domain conta... 33 9.0
>UniRef50_P0AAY9 Cluster: Uncharacterized protein ybjN; n=37;
Enterobacteriaceae|Rep: Uncharacterized protein ybjN -
Shigella flexneri
Length = 158
Score = 182 bits (442), Expect = 1e-44
Identities = 88/91 (96%), Positives = 88/91 (96%)
Frame = -1
Query: 526 GDEFF*CDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAIN 347
G FF CDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAIN
Sbjct: 20 GMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAIN 79
Query: 346 ASSLTVKAFLDMQDDNLPKLVVCQSLSVMQG 254
ASSLTVKAFLDMQDDNLPKLVVCQSLSVMQG
Sbjct: 80 ASSLTVKAFLDMQDDNLPKLVVCQSLSVMQG 110
Score = 103 bits (246), Expect = 6e-21
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = -3
Query: 257 GVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYF 117
GVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYF
Sbjct: 110 GVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYF 156
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2
Query: 582 MTSLVVPGLDTLRQWLDDLGMSFFD 508
MTSLVVPGLDTLRQWLDDLGMSFF+
Sbjct: 1 MTSLVVPGLDTLRQWLDDLGMSFFE 25
>UniRef50_A4SLU1 Cluster: Putative uncharacterized protein; n=2;
Aeromonas|Rep: Putative uncharacterized protein -
Aeromonas salmonicida (strain A449)
Length = 153
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/89 (40%), Positives = 59/89 (66%)
Frame = -1
Query: 520 EFF*CDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINAS 341
E + CD C +H+ +Q+ DG+ +++I + + +LFS+ EVRPSA+LPL A+L +N
Sbjct: 22 EHYVCDQCHGIHIVSLQSVDGIQESRIFVEEEGLLFSSELEVRPSALLPLMAELGRLNMQ 81
Query: 340 SLTVKAFLDMQDDNLPKLVVCQSLSVMQG 254
++K FLD+ DDNLP+L+V ++ G
Sbjct: 82 YPSLKVFLDIIDDNLPRLIVGHTVFTKAG 110
>UniRef50_Q0VNM1 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 183
Score = 79.4 bits (187), Expect = 8e-14
Identities = 36/85 (42%), Positives = 58/85 (68%)
Frame = -1
Query: 508 CDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTV 329
C++C ALHL +Q +GV DA++ + ++ IL ++ EVRP+A+ + A+L +N + +V
Sbjct: 54 CEHCHALHLSELQEREGVVDARLFVEEDGILLTSELEVRPAALFAVQAELGRLNMAYPSV 113
Query: 328 KAFLDMQDDNLPKLVVCQSLSVMQG 254
K FLD+ DD+LP+LVVC L +G
Sbjct: 114 KVFLDVNDDSLPRLVVCDLLLGRKG 138
>UniRef50_A4A9V6 Cluster: Putative uncharacterized protein; n=1;
Congregibacter litoralis KT71|Rep: Putative
uncharacterized protein - Congregibacter litoralis KT71
Length = 157
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/89 (38%), Positives = 52/89 (58%)
Frame = -1
Query: 520 EFF*CDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINAS 341
E+ C C+ LHL ++N +GV D+++ L +L + E+RP A+LPL+ADL IN
Sbjct: 23 EYSDCGECKGLHLAALKNIEGVIDSRLFLERYGLLLTTELEIRPMALLPLSADLGRINMD 82
Query: 340 SLTVKAFLDMQDDNLPKLVVCQSLSVMQG 254
+K FLD+ DD P+LV+ + G
Sbjct: 83 YPILKIFLDVVDDATPQLVIAGIMPTQAG 111
>UniRef50_Q2SIX5 Cluster: Putative uncharacterized protein; n=1;
Hahella chejuensis KCTC 2396|Rep: Putative
uncharacterized protein - Hahella chejuensis (strain
KCTC 2396)
Length = 157
Score = 70.5 bits (165), Expect = 4e-11
Identities = 28/85 (32%), Positives = 52/85 (61%)
Frame = -1
Query: 508 CDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTV 329
C CQ +H+ +Q+ +GV ++++ L ++F+ E+R SA+L L A+L +N + +
Sbjct: 26 CGQCQGVHIADLQSQEGVLESRVFLEQECLIFTTEVELRASALLNLVAELPRLNGAYANI 85
Query: 328 KAFLDMQDDNLPKLVVCQSLSVMQG 254
K F D+ DD P++++C +L V G
Sbjct: 86 KTFADLADDGAPRVIMCDTLWVSAG 110
>UniRef50_A4BJU4 Cluster: Putative uncharacterized protein; n=1;
Reinekea sp. MED297|Rep: Putative uncharacterized
protein - Reinekea sp. MED297
Length = 151
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/86 (30%), Positives = 48/86 (55%)
Frame = -1
Query: 520 EFF*CDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINAS 341
E F C +C+ +HLP + D V +++ + + + + +RPSAVLPL + +N
Sbjct: 17 EAFVCQDCEGIHLPAWEGRDSVLESRCFVETSRLYWLTEIAIRPSAVLPLQGAVHFMNYD 76
Query: 340 SLTVKAFLDMQDDNLPKLVVCQSLSV 263
+K + M DD++P+L++ +L V
Sbjct: 77 YGLLKVMIAMADDDVPRLLLTHALPV 102
>UniRef50_Q8CKU2 Cluster: Putative uncharacterized protein; n=1;
Yersinia pestis|Rep: Putative uncharacterized protein -
Yersinia pestis
Length = 65
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +2
Query: 395 DFRHGRKQDRVIDQIDFGIKDTVEILHMGQMQSLTVITSKK 517
+F RKQD VI+QI+FGIK T++ILH+ QM+ LT +T KK
Sbjct: 15 NFGQCRKQDNVINQINFGIKHTLKILHVRQMERLTGVTLKK 55
>UniRef50_Q6Y0Z5 Cluster: RGC2-like protein; n=5; Helianthus
annuus|Rep: RGC2-like protein - Helianthus annuus
(Common sunflower)
Length = 395
Score = 36.3 bits (80), Expect = 0.73
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Frame = -1
Query: 502 NCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKA 323
N ++ +P + N V + DL+ + FS + ++ VL + T++
Sbjct: 53 NITSVVVPQLSNLKSVSIHECDLLQHIFTFSTLESLKQLKVLRVM--------KCKTIQV 104
Query: 322 FLDMQDDNLPKLVVCQSLSVMQG*PMSSLHGSCVRAKSRFRWSFLKLMPINCCYRLMM-- 149
+ +++ PK+VV L ++ + +L G + + FRW L + IN C +L+M
Sbjct: 105 IVKEENETSPKVVVFPRLETLKLDDLPNLKGFFM-GMNDFRWPSLHNVLINKCPQLIMFT 163
Query: 148 KGKTTLPK 125
G++ PK
Sbjct: 164 SGQSKTPK 171
>UniRef50_Q7Y2G8 Cluster: Putative uncharacterized protein; n=3;
Caudovirales|Rep: Putative uncharacterized protein -
Stx2 converting phage II
Length = 88
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 312 ISRNAFTVSELALMADKSAASGNTAEGRTSAMAENRIVLSIRSILASKTPSKFCI 476
IS +A ++S AL+ +SA S RTS+++ R + SIR+I S+ S I
Sbjct: 32 ISVSALSLSLAALILSRSARSFGAVSARTSSVSNERSIDSIRAIFRSRACSALSI 86
>UniRef50_UPI000023C9C8 Cluster: hypothetical protein FG00463.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00463.1 - Gibberella zeae PH-1
Length = 403
Score = 33.9 bits (74), Expect = 3.9
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 280 KPPALADYHPAYQEMLSRSANWH*WQINPPPAAIRLKVGLPPWQKTGS 423
K P + +YHP + S N H W + PPP+A ++ G P + S
Sbjct: 188 KNPPVNEYHPPVVSSKAPSRNAHQWMLQPPPSA-KVMEGKVPVSRAAS 234
>UniRef50_Q3T9U6 Cluster: Activated spleen cDNA, RIKEN full-length
enriched library, clone:F830113B01 product:hypothetical
protein, full insert sequence; n=2; Murinae|Rep:
Activated spleen cDNA, RIKEN full-length enriched
library, clone:F830113B01 product:hypothetical protein,
full insert sequence - Mus musculus (Mouse)
Length = 148
Score = 33.5 bits (73), Expect = 5.1
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = -1
Query: 388 SAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQ-SLSVMQG*PMSSLHG-SCVRA 215
S ++ L LS NAS L FLD + P+L++C+ L +QG P+S G SC
Sbjct: 23 SHLMGLTPALSLSNASVLARSLFLDRASQSGPRLLLCKVHLRHLQGCPLSLAPGPSCRCV 82
Query: 214 KSRFR 200
+ +F+
Sbjct: 83 QKQFQ 87
>UniRef50_Q6AN94 Cluster: Hypothetical membrane protein; n=1;
Desulfotalea psychrophila|Rep: Hypothetical membrane
protein - Desulfotalea psychrophila
Length = 569
Score = 33.1 bits (72), Expect = 6.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 211 SRFRWSFLKLMPINCCYRLMMKGKTTLPKT 122
S W F+ L+ +CCYR++ + + TL KT
Sbjct: 43 SNMTWCFVALLIASCCYRIIQQKELTLSKT 72
>UniRef50_A3JGN7 Cluster: Pseudouridylate synthases, 23S
RNA-specific; n=2; Marinobacter|Rep: Pseudouridylate
synthases, 23S RNA-specific - Marinobacter sp. ELB17
Length = 304
Score = 33.1 bits (72), Expect = 6.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -1
Query: 472 QNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKA 323
Q DG D K + + L+S + SAV + + S+INASS+ KA
Sbjct: 174 QTIDGDIDGKAAISHVSTLYSNAGSINTSAVNSNSTNASSINASSINTKA 223
>UniRef50_Q3UY28 Cluster: Adult male olfactory brain cDNA, RIKEN
full-length enriched library, clone:6430543M06
product:Fanconi anemia, complementation group E, full
insert sequence; n=9; Eutheria|Rep: Adult male olfactory
brain cDNA, RIKEN full-length enriched library,
clone:6430543M06 product:Fanconi anemia, complementation
group E, full insert sequence - Mus musculus (Mouse)
Length = 412
Score = 32.7 bits (71), Expect = 9.0
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -1
Query: 388 SAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQ-SLSVMQG*PMSSLHGSCVRA 215
S ++ L LS NAS L FLD + P+L++C+ L +QG P+S G R+
Sbjct: 342 SHLMGLTPALSLSNASVLARSLFLDRASQSGPRLLLCKVHLRHLQGCPLSLAPGPSCRS 400
>UniRef50_Q7UW62 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 579
Score = 32.7 bits (71), Expect = 9.0
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 567 VPGLDTLRQWLDDLGMSFFDVITVRLCICP-ICRISTVSLMPKSI 436
VPG +R+ + + G S+FD T R CP CR+ V PK+I
Sbjct: 274 VPG-PMIRRTVREPGTSYFDAATCRTVYCPGKCRVECVQGCPKTI 317
>UniRef50_Q5DZ14 Cluster: ABC transporter ATP-binding protein; n=1;
Vibrio fischeri ES114|Rep: ABC transporter ATP-binding
protein - Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 259
Score = 32.7 bits (71), Expect = 9.0
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 498 QLSHQKNSSPGHRAIDAAYPD--QERPAMS*FC-TTSFDKKTGTAYAKSAGKTMISNVIA 668
QL H+ N ++ YPD Q + A+ T S + G AGK+ + N +
Sbjct: 17 QLRHRMNPIITVSSVSKHYPDSNQAQQALDNISFTLSSGQVLGLLGHNGAGKSTLINALL 76
Query: 669 TNHRFSGNI 695
HRFSGNI
Sbjct: 77 GAHRFSGNI 85
>UniRef50_A5V8K3 Cluster: Rieske (2Fe-2S) domain protein; n=1;
Sphingomonas wittichii RW1|Rep: Rieske (2Fe-2S) domain
protein - Sphingomonas wittichii RW1
Length = 448
Score = 32.7 bits (71), Expect = 9.0
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +1
Query: 361 NPPPAAIRLKVGLPPWQKTGSCYRSDRFWHQRHRR-----NSAYGADAEPDSYHIKKTHP 525
NPPP L LP + YR D +HRR N G DA +SYH+ HP
Sbjct: 169 NPPPLRDYLGPILPMLEN----YRIDEMHVVQHRRSDWAANWKGGVDAFYESYHLHAIHP 224
Query: 526 QVIEPLTQR 552
Q + L R
Sbjct: 225 QTMGMLDDR 233
>UniRef50_A1G9C5 Cluster: Putative uncharacterized protein
precursor; n=2; Salinispora arenicola CNS205|Rep:
Putative uncharacterized protein precursor - Salinispora
arenicola CNS205
Length = 291
Score = 32.7 bits (71), Expect = 9.0
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 375 GNTA-EGRTSAMAENRIVLSIRSILASKTPSKFCIWGRCRA*QLSHQKNSSPGHRAIDAA 551
G+TA G +A+ E R+ ++ I + P FC G S + S GH D
Sbjct: 25 GSTAGTGTANAVPEKRVHNGMQFIFSPSAPDNFCTIGAVGTDDYSREIAISAGHCMSDPN 84
Query: 552 YPDQE 566
Y D+E
Sbjct: 85 YADRE 89
>UniRef50_A7ASG6 Cluster: HECT/ubiquitin-transferase domain containing
protein; n=1; Babesia bovis|Rep:
HECT/ubiquitin-transferase domain containing protein -
Babesia bovis
Length = 4713
Score = 32.7 bits (71), Expect = 9.0
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -3
Query: 287 GGLPVFIRYAGVTYEQFAWFVRQSEEQISMVILEANA-HQLLLPTDDEGQN--NVTENY 120
G L VFI G TY + VR S + I ++ H L+L + EGQ+ N+ E Y
Sbjct: 1296 GILAVFIHLLGCTYNHIDFSVRTSSQAILQLLQRLQTKHSLILSSLSEGQSMANLREQY 1354
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,460,298
Number of Sequences: 1657284
Number of extensions: 15707731
Number of successful extensions: 41256
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 39897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41250
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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