Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0147.Seq
         (703 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC106877-1|AAI06878.1|  663|Homo sapiens chromosome 1 open readi...    31   4.0  
AK001763-1|BAA91892.1|  663|Homo sapiens protein ( Homo sapiens ...    31   4.0  

>BC106877-1|AAI06878.1|  663|Homo sapiens chromosome 1 open reading
           frame 106 protein.
          Length = 663

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -1

Query: 403 AEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPK 290
           +E  P+A LPL  +LSA + SSL+    L+ ++  +PK
Sbjct: 246 SEPPPAAALPLGRELSASDDSSLSDGLLLEEEESQVPK 283


>AK001763-1|BAA91892.1|  663|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10901 fis, clone NT2RP5003524. ).
          Length = 663

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -1

Query: 403 AEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPK 290
           +E  P+A LPL  +LSA + SSL+    L+ ++  +PK
Sbjct: 246 SEPPPAAALPLGRELSASDDSSLSDGLLLEEEESQVPK 283


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,847,594
Number of Sequences: 237096
Number of extensions: 2468604
Number of successful extensions: 4718
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4718
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)