Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0146.Seq
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.7  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   6.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   6.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   6.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   6.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.2  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 333 YYKSYYIFLYTVLATLLLSREIVN 404
           +Y S+YI  YT+L+   L R   N
Sbjct: 56  FYFSFYITSYTLLSVYSLFRIATN 79


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 333 YYKSYYIFLYTVLATLLLSREIVN 404
           +Y S+YI  YT+L+   L R   N
Sbjct: 56  FYFSFYITSYTLLSVYSLFRIATN 79


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 471 QIKTKRTWQYCVLKYF 518
           +I+ K+ W  C+  YF
Sbjct: 116 KIRAKKRWSQCMYMYF 131


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 471 QIKTKRTWQYCVLKYF 518
           +I+ K+ W  C+  YF
Sbjct: 430 KIRAKKRWSQCMYMYF 445


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 471 QIKTKRTWQYCVLKYF 518
           +I+ K+ W  C+  YF
Sbjct: 663 KIRAKKRWSQCMYMYF 678


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 471 QIKTKRTWQYCVLKYF 518
           +I+ K+ W  C+  YF
Sbjct: 663 KIRAKKRWSQCMYMYF 678


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 393 RVTTTMLPGRCIKIYNNFYNILLLI 319
           R T + +   C  +YN F++ LLL+
Sbjct: 132 RYTLSFIENYCQFLYNCFHSTLLLM 156


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 312 TRILRVVYYKSYYIFLYTVLATLLL 386
           TRI+ V YY+ Y +  +   A  ++
Sbjct: 133 TRIMGVAYYEQYAVEFFQFYAQFIV 157


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 339 YNILLLIYVCSVLAHPHYSY 280
           YN L  I   S+L  PH +Y
Sbjct: 287 YNTLFFIVYVSLLLGPHPTY 306


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +3

Query: 318 ILRVVYYKSYYIFLYTV 368
           +L++V+   Y+I+L+TV
Sbjct: 140 LLQLVFVFCYFIYLFTV 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,109
Number of Sequences: 336
Number of extensions: 3203
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)