Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0146.Seq
         (766 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    26   1.1  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   4.5  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   4.5  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    24   5.9  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +3

Query: 285 SNVGVRAQSTRILRVVYYKSYYIFLYTVLATLLLSRE 395
           +NVG+  QS  ++ + +  +   FLY +L T L +++
Sbjct: 289 TNVGISLQSVTVVVMFFLATAETFLYCLLGTRLATQQ 325


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 669 YHRQSWKLWFLSGNIDSSKLNRVHVYCLQR 758
           +HR   +LWF +  ID+ + N   +Y   R
Sbjct: 137 HHRGGHRLWFDTAEIDAERDNNQLLYASLR 166


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +1

Query: 439 FIININ*IE*TKLKQKERGNTVY*NTFIV*DINDQVPCLNVTKYLC 576
           FI+ +  IE +KL Q    +T+   T IV D+ND++P      Y C
Sbjct: 362 FILEVVAIEESKL-QPAPSSTME-ITVIVTDVNDEIPRFRSDGYEC 405


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 719 TVNVAGEKPKFPRLSVIVSTFP 654
           T+NV    P FP  +VI+  +P
Sbjct: 78  TLNVVDLSPPFPNTNVILKPYP 99


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,628
Number of Sequences: 2352
Number of extensions: 13438
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)