Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0145.Seq
(416 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 83 1e-16
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 83 1e-16
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 71 4e-13
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 71 4e-13
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 66 1e-11
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 66 1e-11
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 66 1e-11
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 66 1e-11
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 66 1e-11
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 46 8e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 43 8e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 43 8e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 43 8e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 43 8e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 43 8e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 43 8e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 43 8e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 42 2e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 42 2e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 42 2e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 40 7e-04
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.003
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.003
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 38 0.004
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 38 0.004
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 38 0.004
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 38 0.004
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 38 0.004
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 38 0.004
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 38 0.004
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 37 0.007
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 37 0.007
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 37 0.007
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 36 0.012
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.016
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.036
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.036
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 34 0.036
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 34 0.048
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 34 0.048
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.063
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 33 0.063
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 33 0.083
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 33 0.083
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 33 0.083
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 33 0.11
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 33 0.11
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.11
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 33 0.11
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 32 0.19
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 31 0.25
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 31 0.25
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 31 0.25
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 31 0.25
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 31 0.25
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 31 0.25
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 31 0.25
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 31 0.34
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 31 0.44
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 30 0.59
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 30 0.78
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 30 0.78
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 30 0.78
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 30 0.78
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 0.78
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 29 1.8
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 29 1.8
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 29 1.8
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 29 1.8
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 29 1.8
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 1.8
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 29 1.8
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 29 1.8
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 29 1.8
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 28 3.1
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 28 3.1
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 3.1
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 28 3.1
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 27 4.1
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 4.1
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 27 5.5
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 27 7.2
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 27 7.2
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 26 9.5
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 26 9.5
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 26 9.5
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 26 9.5
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 26 9.5
AF003384-11|AAL08042.1| 487|Caenorhabditis elegans Hypothetical... 26 9.5
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 82.6 bits (195), Expect = 1e-16
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-K 182
YGE+ VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K
Sbjct: 52 YGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKK 111
Query: 183 IFVGGLSSEISDDEIRNFFSEFGTS*KWRCPLTKQRTKER 302
+FVGGL S+ S+ ++R+ F +FG P KQ TK R
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ-TKAR 150
Score = 50.0 bits (114), Expect = 7e-07
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +2
Query: 260 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
++E PFDK R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 44.4 bits (100), Expect = 3e-05
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 185
+G+++ I D T R FAFIVF+ ES DK + + T ++ D KKA GK
Sbjct: 133 FGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VPQGKR 191
Query: 186 FVG 194
F G
Sbjct: 192 FPG 194
Score = 35.1 bits (77), Expect = 0.021
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 260 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 403
+ ++ +D+T + +GF F+ F + + L ++TI GK V+VK A
Sbjct: 57 QAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
Score = 31.9 bits (69), Expect = 0.19
Identities = 10/24 (41%), Positives = 21/24 (87%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
KIFVGG+S E++++++ + F+++G
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYG 53
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 82.6 bits (195), Expect = 1e-16
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-K 182
YGE+ VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K
Sbjct: 52 YGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKK 111
Query: 183 IFVGGLSSEISDDEIRNFFSEFGTS*KWRCPLTKQRTKER 302
+FVGGL S+ S+ ++R+ F +FG P KQ TK R
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ-TKAR 150
Score = 50.0 bits (114), Expect = 7e-07
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +2
Query: 260 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
++E PFDK R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 44.4 bits (100), Expect = 3e-05
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 185
+G+++ I D T R FAFIVF+ ES DK + + T ++ D KKA GK
Sbjct: 133 FGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA-VPQGKR 191
Query: 186 FVG 194
F G
Sbjct: 192 FPG 194
Score = 35.1 bits (77), Expect = 0.021
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 260 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 403
+ ++ +D+T + +GF F+ F + + L ++TI GK V+VK A
Sbjct: 57 QAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
Score = 31.9 bits (69), Expect = 0.19
Identities = 10/24 (41%), Positives = 21/24 (87%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
KIFVGG+S E++++++ + F+++G
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYG 53
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 70.5 bits (165), Expect = 4e-13
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK--------- 158
+GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK
Sbjct: 68 FGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQA 127
Query: 159 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
K + K+F+GGLS+ + ++++ +F +G
Sbjct: 128 KLVTKTKKVFIGGLSATSTLEDMKQYFETYG 158
Score = 47.2 bits (107), Expect = 5e-06
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 173
YG++E + D T R RGF F+ F + E DKV H IN K V+ KKA+ +
Sbjct: 157 YGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 275 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 33.9 bits (74), Expect = 0.048
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 278 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
D + +GF FITF V+ +L + + GK++D K A PK
Sbjct: 79 DPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Score = 32.7 bits (71), Expect = 0.11
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 123 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
E +N D GK+F+GGLS + + + +R++F FG
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFG 69
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 70.5 bits (165), Expect = 4e-13
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK--------- 158
+GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK+DPK
Sbjct: 68 FGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQA 127
Query: 159 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
K + K+F+GGLS+ + ++++ +F +G
Sbjct: 128 KLVTKTKKVFIGGLSATSTLEDMKQYFETYG 158
Score = 47.2 bits (107), Expect = 5e-06
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 173
YG++E + D T R RGF F+ F + E DKV H IN K V+ KKA+ +
Sbjct: 157 YGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 275 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 33.9 bits (74), Expect = 0.048
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 278 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
D + +GF FITF V+ +L + + GK++D K A PK
Sbjct: 79 DPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Score = 32.7 bits (71), Expect = 0.11
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 123 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
E +N D GK+F+GGLS + + + +R++F FG
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFG 69
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 66.1 bits (154), Expect = 1e-11
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 182
+GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 46 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 105
Query: 183 ----------IFVGGLSSEISDDEIRNFFSEFGTS*KWRCPLTKQRTKER 302
++V G+ + ++D + +F+++GT K L K K R
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 278 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 57 DPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 101
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 173
YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
KIFVGGL+S +DD +R F+S+FG
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFG 47
Score = 31.1 bits (67), Expect = 0.34
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 266 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 66.1 bits (154), Expect = 1e-11
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 182
+GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 8 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 67
Query: 183 ----------IFVGGLSSEISDDEIRNFFSEFGTS*KWRCPLTKQRTKER 302
++V G+ + ++D + +F+++GT K L K K R
Sbjct: 68 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 117
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 278 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 19 DPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 63
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 173
YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 99 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 31.1 bits (67), Expect = 0.34
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 266 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 106 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 66.1 bits (154), Expect = 1e-11
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 182
+GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 8 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 67
Query: 183 ----------IFVGGLSSEISDDEIRNFFSEFGTS*KWRCPLTKQRTKER 302
++V G+ + ++D + +F+++GT K L K K R
Sbjct: 68 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 117
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 278 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 19 DPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 63
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 173
YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 99 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 31.1 bits (67), Expect = 0.34
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 266 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 106 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 66.1 bits (154), Expect = 1e-11
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 182
+GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 46 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 105
Query: 183 ----------IFVGGLSSEISDDEIRNFFSEFGTS*KWRCPLTKQRTKER 302
++V G+ + ++D + +F+++GT K L K K R
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 278 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 57 DPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 101
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 173
YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
KIFVGGL+S +DD +R F+S+FG
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFG 47
Score = 31.1 bits (67), Expect = 0.34
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 266 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 66.1 bits (154), Expect = 1e-11
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 182
+GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A R K
Sbjct: 46 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 105
Query: 183 ----------IFVGGLSSEISDDEIRNFFSEFGTS*KWRCPLTKQRTKER 302
++V G+ + ++D + +F+++GT K L K K R
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPR 155
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 278 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
D T + +GF F+TF + V+ +K I GK VD KRA P+
Sbjct: 57 DPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPR 101
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 173
YG + + D T + RGF F+ F +S+D+ + H +N + D +K ++
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
KIFVGGL+S +DD +R F+S+FG
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFG 47
Score = 31.1 bits (67), Expect = 0.34
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 266 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
E+ DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 46.4 bits (105), Expect = 8e-06
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 152
YG I+S+N+ DP+TG RGFA I F + + +K + H I+ +VD
Sbjct: 48 YGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVD 96
Score = 31.5 bits (68), Expect = 0.25
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 263 VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 409
V M +D +GF ITF+S+ N ++ I G VDV+ P
Sbjct: 54 VNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 43.2 bits (97), Expect = 8e-05
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPK 158
YG + S N+ D +T S+G F+ F ++I+ KV+ H + K D +
Sbjct: 78 YGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE 137
Query: 159 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
R K+F+G LS + +++ +R F++FG
Sbjct: 138 NRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 43.2 bits (97), Expect = 8e-05
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPK 158
YG + S N+ D +T S+G F+ F ++I+ KV+ H + K D +
Sbjct: 78 YGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE 137
Query: 159 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
R K+F+G LS + +++ +R F++FG
Sbjct: 138 NRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 43.2 bits (97), Expect = 8e-05
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPK 158
YG + S N+ D +T S+G F+ F ++I+ KV+ H + K D +
Sbjct: 78 YGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE 137
Query: 159 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
R K+F+G LS + +++ +R F++FG
Sbjct: 138 NRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 43.2 bits (97), Expect = 8e-05
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPK 158
YG + S N+ D +T S+G F+ F ++I+ KV+ H + K D +
Sbjct: 78 YGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE 137
Query: 159 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
R K+F+G LS + +++ +R F++FG
Sbjct: 138 NRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 43.2 bits (97), Expect = 8e-05
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPK 158
YG + S N+ D +T S+G F+ F ++I+ KV+ H + K D +
Sbjct: 78 YGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE 137
Query: 159 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
R K+F+G LS + +++ +R F++FG
Sbjct: 138 NRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 43.2 bits (97), Expect = 8e-05
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPK 158
YG + S N+ D +T S+G F+ F ++I+ KV+ H + K D +
Sbjct: 78 YGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE 137
Query: 159 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
R K+F+G LS + +++ +R F++FG
Sbjct: 138 NRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 43.2 bits (97), Expect = 8e-05
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEHTINNKKVDPK 158
YG + S N+ D +T S+G F+ F ++I+ KV+ H + K D +
Sbjct: 78 YGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE 137
Query: 159 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
R K+F+G LS + +++ +R F++FG
Sbjct: 138 NRNER--KLFIGQLSKKHNEENLREIFAKFG 166
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 173
+G + V DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 72 WGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 127
Score = 34.3 bits (75), Expect = 0.036
Identities = 11/24 (45%), Positives = 21/24 (87%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
K+F+GGLS + +D+++ N+FS++G
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWG 73
Score = 33.5 bits (73), Expect = 0.063
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 284 TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
TK+ R GF F+TF S + +GGK VD KRA P+
Sbjct: 86 TKHSR-GFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 127
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 173
+G + V DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 92 WGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 147
Score = 34.3 bits (75), Expect = 0.036
Identities = 11/24 (45%), Positives = 21/24 (87%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
K+F+GGLS + +D+++ N+FS++G
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWG 93
Score = 33.5 bits (73), Expect = 0.063
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 284 TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
TK+ R GF F+TF S + +GGK VD KRA P+
Sbjct: 106 TKHSR-GFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 147
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 173
+G + V DPNT SRGF F+ F + S + M H + K VD K+A R
Sbjct: 93 WGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 148
Score = 34.3 bits (75), Expect = 0.036
Identities = 11/24 (45%), Positives = 21/24 (87%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
K+F+GGLS + +D+++ N+FS++G
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWG 94
Score = 33.5 bits (73), Expect = 0.063
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 284 TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 412
TK+ R GF F+TF S + +GGK VD KRA P+
Sbjct: 107 TKHSR-GFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPR 148
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 39.9 bits (89), Expect = 7e-04
Identities = 23/80 (28%), Positives = 41/80 (51%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 185
YGE+ +IN+ D +TG+S+GFAF+ +K S ++A N + + + H +
Sbjct: 61 YGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TILAV--DNFNGISLHKRMIRVDHVEE 116
Query: 186 FVGGLSSEISDDEIRNFFSE 245
+ E +DDE + + E
Sbjct: 117 YKVPKYKEDADDETKRLWEE 136
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = +3
Query: 51 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-------GKIFVGGLSSE 209
G S+GF F+ + +KV+A +H I+ ++ D K R +IFVG L+ +
Sbjct: 210 GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDK 269
Query: 210 ISDDEIRNFFSE 245
+ + ++R F +
Sbjct: 270 VDEHQLRKVFGD 281
Score = 29.9 bits (64), Expect = 0.78
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 60 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 173
RGFAF+ + E+ +++++ G T+N V A+ R
Sbjct: 302 RGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 281 KTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 397
K+ KGF F+ S N +L P+ I G+ DVK
Sbjct: 207 KSDGNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVK 245
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 37.9 bits (84), Expect = 0.003
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 9 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA-RHGKI 185
G +E++ + D +TG+ +GFAF+ FK S+ +A TI +K D + K + G +
Sbjct: 271 GPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LALSMETIKMEKRDLRITKVMKKGHL 328
Query: 186 FVGGLSSEISDDEIRNFFSEFGTS*KWRCPLTKQRTKER 302
+ + + +N G K++ K+RT E+
Sbjct: 329 TKIQTAKKRTSHGKKNQNEITGKLHKFKFSTKKERTTEQ 367
Score = 34.7 bits (76), Expect = 0.027
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +3
Query: 72 FIVFKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRN 233
++ F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 234 FFS 242
FFS
Sbjct: 265 FFS 267
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +3
Query: 183 IFVGGLSSEISDDEIRNFFSEFGT--S*KWR--CPLTKQRTKERASVSSHLN 326
+FVG + +++ +R FS+FGT S + R P ++ TK ++ LN
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHLTGKLN 196
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.9 bits (84), Expect = 0.003
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Frame = +3
Query: 9 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH--- 176
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 96
Query: 177 ---GKIFVGGLSSEISDDEIRNFFSEFG 251
IFVG L E+ + + + FS FG
Sbjct: 97 DVGANIFVGNLDPEVDEKLLYDTFSAFG 124
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 AYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 119
A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 122 AFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.9 bits (84), Expect = 0.003
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Frame = +3
Query: 9 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH--- 176
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 47 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 106
Query: 177 ---GKIFVGGLSSEISDDEIRNFFSEFG 251
IFVG L E+ + + + FS FG
Sbjct: 107 DVGANIFVGNLDPEVDEKLLYDTFSAFG 134
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 AYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 119
A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 132 AFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPE 95
+YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 339 SYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 35.5 bits (78), Expect = 0.016
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPK 158
A G + SI V D T S G+A++ F+ P ++ M ++ K + DP
Sbjct: 54 AAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPA 113
Query: 159 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
++ G IF+ L I + I + FS FG
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG 144
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 119
+G I S V T G+S+GF F+ F PE + + A
Sbjct: 236 FGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPE 95
+YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 279 SYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 308
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 119
+G I S V T G+S+GF F+ F PE + + A
Sbjct: 176 FGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 211
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPE 95
+YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 276 SYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 305
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 119
+G I S V T G+S+GF F+ F PE + + A
Sbjct: 173 FGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 208
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPE 95
+YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 339 SYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 35.5 bits (78), Expect = 0.016
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPK 158
A G + SI V D T S G+A++ F+ P ++ M ++ K + DP
Sbjct: 54 AAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPA 113
Query: 159 KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
++ G IF+ L I + I + FS FG
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG 144
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 119
+G I S V T G+S+GF F+ F PE + + A
Sbjct: 236 FGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 182
+G++E +++KT NT + +AF++F+ + + A E + + K +GK
Sbjct: 192 HGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKS 247
Query: 183 -----IFVGGLSSEISDDEIRNFFSEFG 251
+FVGGL S + ++ F EFG
Sbjct: 248 QVSRRLFVGGLGSWCDKEILQKAFGEFG 275
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 183 IFVGGLSSEISDDEIRNFFSEFG 251
+FVG + S++ + EIR+ F E G
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHG 193
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 182
+G++E +++KT NT + +AF++F+ + + A E + + K +GK
Sbjct: 192 HGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKS 247
Query: 183 -----IFVGGLSSEISDDEIRNFFSEFG 251
+FVGGL S + ++ F EFG
Sbjct: 248 QVSRRLFVGGLGSWCDKEILQKAFGEFG 275
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 183 IFVGGLSSEISDDEIRNFFSEFG 251
+FVG + S++ + EIR+ F E G
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHG 193
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK- 182
+G++E +++KT NT + +AF++F+ + + A E + + K +GK
Sbjct: 169 HGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKS 224
Query: 183 -----IFVGGLSSEISDDEIRNFFSEFG 251
+FVGGL S + ++ F EFG
Sbjct: 225 QVSRRLFVGGLGSWCDKEILQKAFGEFG 252
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 183 IFVGGLSSEISDDEIRNFFSEFG 251
+FVG + S++ + EIR+ F E G
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHG 170
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 36.7 bits (81), Expect = 0.007
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 98
+G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 36.7 bits (81), Expect = 0.007
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 98
+G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 36.7 bits (81), Expect = 0.007
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 98
+G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 35.9 bits (79), Expect = 0.012
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +3
Query: 9 GEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAAGEHTINNKKVD-----PKKAKA 170
GEIES + D TG+S G+ F+ + + +++ V + + NK + P +
Sbjct: 66 GEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPSNDQI 125
Query: 171 RHGKIFVGGLSSEISDDEIRNFFSEFG 251
+ ++V G+ ++ E+ + F FG
Sbjct: 126 KGSNLYVSGIPKSMTLHELESIFRPFG 152
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.016
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 9 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKARHGKI 185
G+I + + DP +G SRG+AF+ + E + H I+ K + ++
Sbjct: 224 GKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRL 283
Query: 186 FVGGLSSEISDDEI 227
F+G + S DEI
Sbjct: 284 FIGNIPKTKSKDEI 297
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.036
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDKVMAAGEHTIN 137
+G+I + D TG +G AF+ + K +++ M +
Sbjct: 52 FGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPADTD 111
Query: 138 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
++ PK K K+F+G LS + S+DE+R F+ FG
Sbjct: 112 SRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFG 148
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.036
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDKVMAAGEHTIN 137
+G+I + D TG +G AF+ + K +++ M +
Sbjct: 52 FGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPADTD 111
Query: 138 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
++ PK K K+F+G LS + S+DE+R F+ FG
Sbjct: 112 SRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFG 148
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 34.3 bits (75), Expect = 0.036
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 152
+G+IE V TD NT +SRG+ F+ K S ++ I+ +K +
Sbjct: 58 FGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRKAN 106
Score = 29.9 bits (64), Expect = 0.78
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
KIFVGGL SD + +F +FG
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFG 59
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 33.9 bits (74), Expect = 0.048
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Frame = +3
Query: 9 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKA 164
G + SI V D + S G+A++ F+ P ++ + I+ + + DP
Sbjct: 81 GPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAAR 140
Query: 165 KARHGKIFVGGLSSEISDDEIRNFFSEFG 251
+A +G IF+ L I + + + FS FG
Sbjct: 141 RAGNGNIFIKNLDRVIDNKSVYDTFSLFG 169
Score = 33.5 bits (73), Expect = 0.063
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPE 95
++G I S V D N GRS+GF F+ F+ PE
Sbjct: 365 SFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 183 IFVGGLSSEISDDEIRNFFSEFGT 254
++V + +++DD +R+ FS FGT
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGT 368
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 33.9 bits (74), Expect = 0.048
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Frame = +3
Query: 9 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKA 164
G + SI V D + S G+A++ F+ P ++ + I+ + + DP
Sbjct: 81 GPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAAR 140
Query: 165 KARHGKIFVGGLSSEISDDEIRNFFSEFG 251
+A +G IF+ L I + + + FS FG
Sbjct: 141 RAGNGNIFIKNLDRVIDNKSVYDTFSLFG 169
Score = 33.5 bits (73), Expect = 0.063
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPE 95
++G I S V D N GRS+GF F+ F+ PE
Sbjct: 365 SFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 183 IFVGGLSSEISDDEIRNFFSEFGT 254
++V + +++DD +R+ FS FGT
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGT 368
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 33.5 bits (73), Expect = 0.063
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 98
YGE+ + V D TG +GFA + F PE+
Sbjct: 302 YGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 146
YG+I ++K G+ RGFAF+ F S +A T N K
Sbjct: 26 YGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAKSNQTFFNSK 71
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 33.5 bits (73), Expect = 0.063
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
K+FVGGL S + + +I NFFS +G
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYG 112
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.083
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK---VMAAGEHTINNKKVDPKKAKARH 176
+G +S++ N + + V + +S D+ A HT+ + +
Sbjct: 145 FGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVVS 204
Query: 177 GKIFVGGLSSEISDDEIRNFFSEFGT 254
K+FVGG+S ++ I FF +FGT
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFGT 230
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 174 HGKIFVGGLSSEISDDEIRNFFSEFG 251
H +F+GGL ++ +EI FSEFG
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFG 343
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.083
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK---VMAAGEHTINNKKVDPKKAKARH 176
+G +S++ N + + V + +S D+ A HT+ + +
Sbjct: 145 FGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVVS 204
Query: 177 GKIFVGGLSSEISDDEIRNFFSEFGT 254
K+FVGG+S ++ I FF +FGT
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFGT 230
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 174 HGKIFVGGLSSEISDDEIRNFFSEFG 251
H +F+GGL ++ +EI FSEFG
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFG 343
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.083
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK---VMAAGEHTINNKKVDPKKAKARH 176
+G +S++ N + + V + +S D+ A HT+ + +
Sbjct: 145 FGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVVS 204
Query: 177 GKIFVGGLSSEISDDEIRNFFSEFGT 254
K+FVGG+S ++ I FF +FGT
Sbjct: 205 NKVFVGGISHMMNRKIINKFFGQFGT 230
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 174 HGKIFVGGLSSEISDDEIRNFFSEFG 251
H +F+GGL ++ +EI FSEFG
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFG 343
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 32.7 bits (71), Expect = 0.11
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 9 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 113
G+I ++ + D TGR RGFAFI F S + +
Sbjct: 29 GQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 171 RHGKIFVGGLSSEISDDEIRNFFSEFG 251
RH +FVG LSSE+ + ++R F FG
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFG 46
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 171 RHGKIFVGGLSSEISDDEIRNFFSEFG 251
RH +FVG LSSE+ + ++R F FG
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFG 56
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 171 RHGKIFVGGLSSEISDDEIRNFFSEFG 251
RH +FVG LSSE+ + ++R F FG
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFG 159
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 171 RHGKIFVGGLSSEISDDEIRNFFSEFG 251
RH +FVG LSSE+ + ++R F FG
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFG 127
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 31.9 bits (69), Expect = 0.19
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +3
Query: 126 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFG 159
Score = 31.1 bits (67), Expect = 0.34
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEHTI--------NNK 143
+GE+ V D T +S+G+ F+ F ++ + +A G+ + N++
Sbjct: 158 FGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSE 217
Query: 144 KVDPK--------KAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
+ K KA + ++VG +S + +D ++R+ FS +G
Sbjct: 218 ENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYG 261
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVF 83
A G + ++ + D TGR RGFAF+ F
Sbjct: 28 AVGHVNNVRIVYDRETGRPRGFAFVEF 54
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 31.5 bits (68), Expect = 0.25
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Frame = +3
Query: 60 RGFAFIVFKAPESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLS 203
RGFA++V + + + + + + + DP+K K+FV +
Sbjct: 632 RGFAYVVMENDQKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVH 691
Query: 204 SEISDDEIRNFFSEFGT 254
+ +DDE++ FS+FGT
Sbjct: 692 FQATDDELKALFSKFGT 708
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.25
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKARHG 179
AYG + S+ + T N S+GF F+ + ES +K AA E + + ++ ++A
Sbjct: 73 AYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPTRR 130
Query: 180 KI 185
K+
Sbjct: 131 KL 132
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 31.5 bits (68), Expect = 0.25
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 156 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
K +RH +FVG L SEI ++R F +FG
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFG 156
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 126 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
H + K D +A A + ++VG +++ + +DEIR F FG
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFG 279
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 101
A G + + + TD TGRS+G ++ F ES+
Sbjct: 47 AVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 31.5 bits (68), Expect = 0.25
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 101
A G + + + TD TGRS+G ++ F ES+
Sbjct: 192 AVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.25
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKARHG 179
AYG + S+ + T N S+GF F+ + ES +K AA E + + ++ ++A
Sbjct: 73 AYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPTRR 130
Query: 180 KI 185
K+
Sbjct: 131 KL 132
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 31.1 bits (67), Expect = 0.34
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 9 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 149
G++ + + D TG + FAF+ F+ ES+ + N+K+
Sbjct: 70 GKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLSGTMFRNRKI 116
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 30.7 bits (66), Expect = 0.44
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 9 GEIESINVKTDPNTGRSRGFAFIVF 83
G + ++ + D TGR RGFAF+ F
Sbjct: 28 GNVSNVRIVCDRETGRPRGFAFVEF 52
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 30.3 bits (65), Expect = 0.59
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 174 HGKIFVGGLSSEISDDEIRNFFSEFG 251
H +F+GGL ++ +EI FSEFG
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFG 129
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 29.9 bits (64), Expect = 0.78
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 183 IFVGGLSSEISDDEIRNFFSEFG 251
+FVG +S ++S+D IR+ FS+ G
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAG 42
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.9 bits (64), Expect = 0.78
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 260 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TPKRTIGGKEVDVKRA 403
++ + D+ KGF ++TFE+EQ +N + G + + V RA
Sbjct: 40 DIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRA 88
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 29.9 bits (64), Expect = 0.78
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 153 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
PKK ++FVG L +E+ + E++ FS G
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHG 140
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 29.9 bits (64), Expect = 0.78
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 153 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
PKK ++FVG L +E+ + E++ FS G
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHG 140
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 0.78
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 153 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 251
PKK ++FVG L +E+ + E++ FS G
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHG 140
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 120 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTS*KWR 269
G+HT + + K +FVG +S + SD+ IR +E G W+
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWK 77
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 120 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTS*KWR 269
G+HT + + K +FVG +S + SD+ IR +E G W+
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWK 77
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPE 95
+GEI ++ D +G SRGF FI F E
Sbjct: 99 FGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 108 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFG 251
+M + + K P A+ + K+F+GGL ++S++++ F FG
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFG 269
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG----EHTINNKKVDPK 158
YG++ + + DP +G A + F ++ + ++ H NNK+V+ K
Sbjct: 389 YGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGRFVQVNHAENNKRVEIK 443
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 28.7 bits (61), Expect = 1.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
KIF+GGL + +++D+++ FG
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFG 315
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
K++VGGL S+ + E+ F FG
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFG 27
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
K++VGGL S+ + E+ F FG
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFG 27
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
K++VGGL S+ + E+ F FG
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFG 27
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFGT 254
KIFVGG+ +I++ +++ F EFG+
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS 320
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 28.7 bits (61), Expect = 1.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
KIF+GGL + +++D+++ FG
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFG 315
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 28.7 bits (61), Expect = 1.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
KIF+GGL + +++D+++ FG
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFG 290
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 28.7 bits (61), Expect = 1.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
KIF+GGL + +++D+++ FG
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFG 293
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 366 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSK 256
L+G L S+ ++ PF +FF+ S+G STSK
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSK 192
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI---NNKKVD 152
YG+I++I++ D TG +G+A + ++ + ++ + T N KVD
Sbjct: 78 YGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQNVKVD 129
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 293 QRKGFCFITFESEQVVNDLLK-TPKR 367
Q KG+ FITFE+E ++ K TPK+
Sbjct: 104 QSKGYGFITFETEDQAEEIRKLTPKQ 129
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 57 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 176
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 293 QRKGFCFITFESEQVVNDLLK-TPKR 367
Q KG+ FITFE+E ++ K TPK+
Sbjct: 105 QSKGYGFITFETEDQAEEIRKLTPKQ 130
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
+I++G L+S +S+ +I +FF +G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYG 27
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
+I++G L+S +S+ +I +FF +G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYG 27
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSEFG 251
+I++G L+S +S+ +I +FF +G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYG 27
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 34 RQIQTQADHEGLPSLCLR 87
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 175 CRALAFFGSTFLLLMVCSPAAMTLSIDSGALNTMKANPRDLPV 47
C + F G T L LM +P + L I SGA+ K + LPV
Sbjct: 213 CLSALFSGLT-LGLMSLTPQELELVIKSGAIKEQKCAAKILPV 254
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 9 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 116
G + I + D TG +GFAF+ F++ + + +A
Sbjct: 200 GRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 26.6 bits (56), Expect = 7.2
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +3
Query: 180 KIFVGGLSSEISDDEIRNFFSE 245
+++VGG S+ +S ++IRN ++
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQ 31
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 24 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 182
++V+ N S+GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 9 VDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 63
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 24 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 182
++V+ N S+GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 127 VDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 144 KVDPKKAKARHGKIFVGGLSSEISDDEIRN 233
K DPKKA++ K+F + +++ DE+ +
Sbjct: 534 KTDPKKAESLSAKLFPETMEVDVNVDELED 563
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVF 83
YG+I +++ D + +S+GF F+ F
Sbjct: 42 YGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 6 YGEIESINVKTDPNTGRSRGFAFIVF 83
YG+I +++ D + +S+GF F+ F
Sbjct: 42 YGDIGDVHIPRDKYSRQSKGFGFVRF 67
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 24 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 182
++V+ N S+GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 127 VDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>AF003384-11|AAL08042.1| 487|Caenorhabditis elegans Hypothetical
protein K07B1.7b protein.
Length = 487
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 135 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTS*KWRCPLTKQRTKERASVS 314
NN + K+ + R V + E+ ++R +FS F + +++C + R + +A S
Sbjct: 21 NNVEDVSKRQEIRCSYAIVRNIPKELHSKDLRKYFSRFVEAGQFQCFHYRHRPEVQAQTS 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,648,872
Number of Sequences: 27780
Number of extensions: 183111
Number of successful extensions: 783
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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