Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0144.Seq
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 140 9e-34
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 139 2e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 4e-33
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 118 5e-27
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 5e-14
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 73 2e-13
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 63 2e-10
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 34 0.11
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.79
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 31 1.0
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 31 1.0
SB_43313| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.4
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24) 28 7.4
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_39822| Best HMM Match : TPR_div1 (HMM E-Value=8.9) 27 9.7
SB_33942| Best HMM Match : Ribosomal_L37e (HMM E-Value=6.2) 27 9.7
SB_15683| Best HMM Match : Y_phosphatase (HMM E-Value=0) 27 9.7
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 9.7
SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043) 27 9.7
SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05) 27 9.7
SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05) 27 9.7
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 140 bits (339), Expect = 9e-34
Identities = 66/97 (68%), Positives = 79/97 (81%)
Frame = +3
Query: 234 PQQHNIRAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 413
P+ AKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 414 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQDKPQK 524
VL KMKETAEAYLG+ V +AVITVPAYFNDSQ + K
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATK 159
Score = 135 bits (326), Expect = 3e-32
Identities = 60/69 (86%), Positives = 66/69 (95%)
Frame = +1
Query: 49 MAKAPAVGIDLGTTYSCVGLFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 228
M KAPA+GIDLGTTYSCVG+FQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 229 MNPNNTIFE 255
+NP NTIF+
Sbjct: 61 LNPENTIFD 69
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = +2
Query: 509 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDQKGTGERNVLIF 640
RQATKDAGTI+GLNVLR+INEPTAAA+AYGLD+ +GE+NVLIF
Sbjct: 155 RQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIF 198
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 139 bits (337), Expect = 2e-33
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = +1
Query: 49 MAKAPAVGIDLGTTYSCVGLFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 228
MAK PAVGIDLGTTYSCVG+FQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 229 MNPNNTIFE 255
MNP NT+F+
Sbjct: 61 MNPENTVFD 69
Score = 137 bits (332), Expect = 6e-33
Identities = 63/97 (64%), Positives = 76/97 (78%)
Frame = +3
Query: 234 PQQHNIRAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 413
P+ AKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 414 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQDKPQK 524
VLTKMKETAEAYLG V +AV+TVPAYF+DSQ + K
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATK 159
Score = 77.4 bits (182), Expect = 9e-15
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +2
Query: 509 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDQKGTGERNVLIF 640
RQATKDAGTI+GLNVLRIINEPTAAAIAYGLD+K ERNVLI+
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIY 198
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 138 bits (334), Expect = 4e-33
Identities = 62/69 (89%), Positives = 66/69 (95%)
Frame = +1
Query: 49 MAKAPAVGIDLGTTYSCVGLFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 228
M KAPA+GIDLGTTYSCVG+FQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 229 MNPNNTIFE 255
MNP NTIF+
Sbjct: 61 MNPTNTIFD 69
Score = 115 bits (277), Expect = 3e-26
Identities = 65/115 (56%), Positives = 75/115 (65%), Gaps = 25/115 (21%)
Frame = +3
Query: 255 AKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV---------- 404
AKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 70 AKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAGRPKVK 129
Query: 405 ---------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQDKPQK 524
SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQ + K
Sbjct: 130 VEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 184
Score = 78.2 bits (184), Expect = 5e-15
Identities = 39/44 (88%), Positives = 40/44 (90%)
Frame = +2
Query: 509 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDQKGTGERNVLIF 640
RQATKDAG ISGLNVLRIINEPTAAAIAYGLD+K ERNVLIF
Sbjct: 248 RQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIF 291
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +3
Query: 399 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQDKPQK 524
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQ + K
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 252
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 118 bits (283), Expect = 5e-27
Identities = 57/97 (58%), Positives = 72/97 (74%)
Frame = +3
Query: 234 PQQHNIRAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 413
P+ AKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 414 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQDKPQK 524
VLTKMKETAEAYLGK V +AV+TVPAYFND+Q + K
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 857
Score = 107 bits (257), Expect = 8e-24
Identities = 48/64 (75%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 VGIDLGTTYSCVGLFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 243
+GIDLGTTYSCVG+F++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 244 TIFE 255
T+F+
Sbjct: 764 TVFD 767
Score = 71.3 bits (167), Expect = 6e-13
Identities = 33/44 (75%), Positives = 40/44 (90%)
Frame = +2
Query: 509 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDQKGTGERNVLIF 640
RQATKDAG I+GL V+RIINEPTAAAIAYG+D+K GE+N+L+F
Sbjct: 853 RQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVF 895
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 KRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 434
KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+ T++K
Sbjct: 127 KRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKT 186
Query: 435 TAEAYLGKTVQNAVITVPAYFNDSQ 509
TAE L V + VI+VP+Y+ D Q
Sbjct: 187 TAEIALKTKVTDCVISVPSYYTDRQ 211
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +1
Query: 67 VGIDLGTTYSCVGLFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 222
VG D+G + + + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 35.5 bits (78), Expect = 0.037
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 509 RQATKDAGTISGLNVLRIINEPTAAAIAYGL 601
R+ DA +GLN LR++N+ TA ++AYG+
Sbjct: 212 RRCMLDASATAGLNCLRLMNDTTAVSLAYGI 242
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Frame = +1
Query: 55 KAPAVGIDLGTTYSCVGLFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 228
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 229 MNPNNTIFE 255
+NP NTI++
Sbjct: 90 INPKNTIYD 98
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +2
Query: 509 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDQKGTGERNVLI 637
R AT A +++G+ VLR+INEPTAAA+AYGL +K G NV++
Sbjct: 185 RNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMV 226
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 AKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMK 431
AKR IG+ F + K + F V +D G V KG PEE+ V+ K++
Sbjct: 99 AKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLR 158
Query: 432 ETAEAYLGKTVQNAVITVPAYFNDSQ 509
AE L TV AV++VPA F+ Q
Sbjct: 159 TMAERNLTTTVTKAVMSVPAEFDIKQ 184
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/57 (50%), Positives = 43/57 (75%)
Frame = +3
Query: 354 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQDKPQK 524
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+Q + K
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATK 58
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/66 (51%), Positives = 37/66 (56%), Gaps = 26/66 (39%)
Frame = +2
Query: 509 RQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLDQK-- 610
RQATKDAGTI+GL+VL RIINEPTAAAIAYGLD+
Sbjct: 54 RQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARG 113
Query: 611 GTGERN 628
G ERN
Sbjct: 114 GKAERN 119
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 118 GKVEIIANDQGNRTTPSYVAFTDTERLI 201
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3
Query: 348 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQ 509
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAE 120
Score = 34.3 bits (75), Expect = 0.085
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 509 RQATKDAGTISGLNVLRIINEPTAAAIAYGLDQK 610
R+A A + GLNVL+I+N TA A+ YGL Q+
Sbjct: 121 RRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQ 154
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 448 ISAKLCRM-QLSRFPRTSMTLKTSHKR-CRYHLRLERSPNH 564
+SAKLC + LS+ R T HKR C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 448 ISAKLCRM-QLSRFPRTSMTLKTSHKR-CRYHLRLERSPNH 564
+SAKLC + LS+ R T HKR C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 127 EIIANDQGNRTTPSYVAFT-DTERL 198
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 256 ARILCCWGSSPPGSWRH 206
AR++CC G SP WRH
Sbjct: 394 ARVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 256 ARILCCWGSSPPGSWRH 206
AR++CC G SP WRH
Sbjct: 169 ARVVCCQGDSPSPRWRH 185
>SB_43313| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 121 KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFEPNVSSD 273
K + G+ + A ++L+ + MNPNN ++P+VSS+
Sbjct: 54 KASVGERQSGSCGYSTQAARAGLDKLLDEVKSTYYKMNPNNIAYDPDVSSE 104
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 235 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 137
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -1
Query: 442 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 263
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCPKI 1167
Query: 262 RLARIL 245
A +L
Sbjct: 1168 SNATVL 1173
>SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24)
Length = 1497
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 415 CLRK*RKLPKLISAKLCRMQLSRFPRTSMTLKTSHKRCRYHLRLERSPNH 564
C K R L +++ L Q + T+ L H R R R R+PNH
Sbjct: 1205 CQHKWRNLKEVLVTSLPERQTGQRNLTNKLLMNLHVRLRRWRRESRAPNH 1254
>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 169 KTEWSCCPGRWR*SPPSRAGRDQRKSTWYPDRFL 68
K W C WR PPSRA D+ W DR++
Sbjct: 213 KVIWKCL--HWR-KPPSRALWDKTGDKWLHDRYV 243
>SB_39822| Best HMM Match : TPR_div1 (HMM E-Value=8.9)
Length = 186
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = -1
Query: 457 LPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSAC----TV 290
+PR + S + ++ +++L +P Y I LP + K + F +C T+
Sbjct: 62 IPRSYNDFSTFTKVSKDIEDQLRELLETPSY---IETLPENQALRKAKDFYRSCMDTKTI 118
Query: 289 ASSNLRPMRRLARILCCWGSSPPGSWRHLR*DA 191
RP+ +L R L W SW + DA
Sbjct: 119 ERLGTRPLMKLIRQLGSWSLCNDKSWNKEKWDA 151
>SB_33942| Best HMM Match : Ribosomal_L37e (HMM E-Value=6.2)
Length = 226
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 415 CLRK*RKLPKLISAKLCRMQLSRFPRTSMTLKTSHKRCRYHLRLERSPNH 564
C K + L +++ L Q+ + T+ L H R R R R+PNH
Sbjct: 95 CQHKWKNLKEVLVPSLPERQMGQRNLTNKLLMNLHVRLRRWRRESRAPNH 144
>SB_15683| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 753
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 459 TVQNAVITVPAYFNDSQDKPQKMQVP 536
+++NA IT+ +D+QD+PQ VP
Sbjct: 385 SLKNANITINVLNDDTQDEPQSWHVP 410
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 392 PRGSQFHGAYENEGNCRSLSRQNCAECSY 478
PRG Q Y G+C S+S++NC + S+
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSF 1168
>SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043)
Length = 801
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 126 HLPVLEETNARVRGTQIDSYCGCFCHFVF 40
+LP +E++NAR G ++ +Y + FVF
Sbjct: 293 NLPGIEKSNARTMGNRLQAYQSSYQVFVF 321
>SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 809
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 415 CLRK*RKLPKLISAKLCRMQLSRFPRTSMTLKTSHKRCRYHLRLERSPNH 564
C K + L +++ L Q+ + T+ L H R R R R+PNH
Sbjct: 156 CQHKWKNLKEVLVPSLPERQMGQRNLTNKLLMNLHVRLRRWRRESRAPNH 205
>SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 983
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 415 CLRK*RKLPKLISAKLCRMQLSRFPRTSMTLKTSHKRCRYHLRLERSPNH 564
C K + L +++ L Q+ + T+ L H R R R R+PNH
Sbjct: 330 CQHKWKNLKEVLVPSLPERQMGQRNLTNKLLMNLHVRLRRWRRESRAPNH 379
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,445,623
Number of Sequences: 59808
Number of extensions: 478862
Number of successful extensions: 1538
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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