Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0143.Seq
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    27   0.16 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    25   0.65 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   1.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    24   1.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   6.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   6.0  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   6.0  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 596 AVTTFIDSTTPFTDSCSNIAYSPSVFCLIKQHQC 495
           A+ TFI S  P      N A +P ++CL   H C
Sbjct: 287 AIATFIQSLAPL-----NSAANPIIYCLFSTHFC 315


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 596 AVTTFIDSTTPFTDSCSNIAYSPSVFCLIKQHQC 495
           A+ T I S  P      N A +P ++CL   H C
Sbjct: 322 AIATLIQSLAPL-----NSAANPVIYCLFSTHLC 350


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = +1

Query: 316 CPICYNDH*EERCGAKGQH*NQK*GSLCDVTQCGS-QKRTGHVCLH 450
           CP C      ER G  G H  +K    C +  CG    +T H+  H
Sbjct: 293 CPNCQE---AERLGPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAH 335


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/56 (26%), Positives = 22/56 (39%)
 Frame = -1

Query: 358 PHTVPLNGRYSILDIIIIVHRWVNVHHFEVNRSTEYLNMSRTYPMHSGPIPPPGSM 191
           P+  P + R  +     +V    + HH         L      P+ S P PPPGS+
Sbjct: 167 PYLTPADDRGRVAAAAAMVAETASFHHDAAGYG---LRNYGPEPVPSTPYPPPGSL 219


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 231 YVRDIFKYSVLLLTSKWW-TLTQRWTMMMMS 320
           YV + F     ++ SK W T+ + W+ M MS
Sbjct: 122 YVLNFFGSIQFIIISKHWVTIMKEWSFMEMS 152


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 281 PLRSQ*EHRVFEYVANVSHALRTDTASREHG 189
           P R +   R F  VAN+   LR  T  R +G
Sbjct: 190 PYRCEHCDRQFVQVANLRRHLRVHTGERPYG 220


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 14/60 (23%), Positives = 21/60 (35%)
 Frame = -1

Query: 226 MHSGPIPPPGSMVTA*RPPYCALGISFCFLITGVLCWTSKSDNVAGAAFELRFTDPRTSD 47
           M   PIP          PP   L  +    I G++ W   S +V G    + +     +D
Sbjct: 405 MFEAPIPNVSPHYVTPTPPEAPLFQNVLPPIGGMMNWNMPSTSVVGDMLNMNWNPSAQND 464


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/41 (21%), Positives = 18/41 (43%)
 Frame = +1

Query: 625 AFEFAKKNGRKKVTTVHKANIMKLSDGLFLETSRRLAKEYP 747
           +FE    +  ++ TT   A I  + D   +  ++ +   YP
Sbjct: 309 SFEKPSSSSNQEKTTTESAKISVIQDDAQMRLNKHVTTTYP 349


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -1

Query: 358 PHTVPLNGRYSILDIIIIVHRWVNVHHF-EVNRSTEYLNMSRTYPMHSGPIP 206
           P T  +N + S   I    + ++ VHH   + RS   L ++ + PM+   +P
Sbjct: 125 PDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIR-LTITASCPMNLQYLP 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,154
Number of Sequences: 336
Number of extensions: 4407
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)