Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0143.Seq
         (754 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    27   0.82 
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    25   3.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   4.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   5.8  
AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    23   7.7  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 370 VAL*PHTVPLNGRYSILDIIIIVHRWVNVHHFEV-NRSTEYLNMSRT 233
           V L P T P N + +  + II V  W+  HH E+    TE + +S T
Sbjct: 663 VLLVPGTTPDNVKAAAEEAIISVMEWMARHHLELAPAKTEMVVISST 709


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 374 ETKSEAAYVTSRNVALRNELDMYAYILNCKSYPGVATRHK 493
           E    AA  T+   A  N +D+Y      + Y GV + H+
Sbjct: 449 EVHEPAALGTAMAAAQANGVDLYKLEAEIRGYAGVQSHHE 488


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -1

Query: 370 VAL*PHTVPLNGRYSILDIIIIVHRWVNVHHFEV 269
           V L P T P        + +  V RW+  HH E+
Sbjct: 677 VLLAPGTTPAAAAVVAEEAVSAVDRWLREHHLEL 710


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 633 IRQEKRQEEGDDGSQSQHH 689
           ++QE++Q+E D     QHH
Sbjct: 640 LQQEEQQQEDDHHHHQQHH 658


>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 391 SLCDVTQCGSQKRTGHVCLHSE 456
           S C  T   +++R G +C+HSE
Sbjct: 83  SACAETFPSTRRRRGALCMHSE 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 844,614
Number of Sequences: 2352
Number of extensions: 18456
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)