Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0137.Seq
(642 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 22 3.7
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 22 4.9
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 22 4.9
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 6.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 8.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 8.6
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 21 8.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 8.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 8.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 8.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 8.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 8.6
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 58 VNSPTPCSLTLVDDPNQ 108
+N+ PC LV DPNQ
Sbjct: 325 MNNILPCVKELVADPNQ 341
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 325 MPQYPPLPAP 354
+PQ PPLP P
Sbjct: 177 LPQVPPLPLP 186
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 325 MPQYPPLPAP 354
+PQ PPLP P
Sbjct: 177 LPQVPPLPLP 186
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/39 (28%), Positives = 14/39 (35%)
Frame = +1
Query: 100 PNQFHGLAADQLTDDIVEQPVSINGIAHNIKRSDFMSLP 216
P F G + DD P G H++ S S P
Sbjct: 211 PKGFQGQNCELNVDDCKPNPCQNGGTCHDLVNSFSCSCP 249
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.6
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 480 PLKKNASTAGCQESAPARNYRDRDKTDLAAQYPARAKHRQ*QTAPRFAP 626
P K STA S+PA + T+ A +K Q P+ P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYP 202
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 8.6
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 480 PLKKNASTAGCQESAPARNYRDRDKTDLAAQYPARAKHRQ*QTAPRFAP 626
P K STA S+PA + T+ A +K Q P+ P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYP 202
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 131 WSAANPWNWFGSSTKVS 81
WS N WN F S + S
Sbjct: 58 WSIFNKWNQFRSYSNFS 74
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.6
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 480 PLKKNASTAGCQESAPARNYRDRDKTDLAAQYPARAKHRQ*QTAPRFAP 626
P K STA S+PA + T+ A +K Q P+ P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYP 202
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 8.6
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 480 PLKKNASTAGCQESAPARNYRDRDKTDLAAQYPARAKHRQ*QTAPRFAP 626
P K STA S+PA + T+ A +K Q P+ P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYP 202
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 8.6
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 480 PLKKNASTAGCQESAPARNYRDRDKTDLAAQYPARAKHRQ*QTAPRFAP 626
P K STA S+PA + T+ A +K Q P+ P
Sbjct: 110 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYP 158
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.6
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 480 PLKKNASTAGCQESAPARNYRDRDKTDLAAQYPARAKHRQ*QTAPRFAP 626
P K STA S+PA + T+ A +K Q P+ P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYP 202
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.6
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +3
Query: 480 PLKKNASTAGCQESAPARNYRDRDKTDLAAQYPARAKHRQ*QTAPRFAP 626
P K STA S+PA + T+ A +K Q P+ P
Sbjct: 154 PGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYP 202
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,063
Number of Sequences: 336
Number of extensions: 3537
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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