Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0137.Seq
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 31 0.70
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 31 0.70
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 31 0.70
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 31 0.70
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 31 0.93
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.1
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 29 2.8
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.7
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 28 4.9
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical pr... 28 6.5
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 28 6.5
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 27 8.6
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 27 8.6
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 27 8.6
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 382 SATATGASKVKPPAPKATENRVHARCEET*PADRSKKTPAPPDARNQPQ 528
+AT A + +P A + + + EE+ P + +P+PP AR +PQ
Sbjct: 543 TATEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQ 591
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 382 SATATGASKVKPPAPKATENRVHARCEET*PADRSKKTPAPPDARNQPQ 528
+AT A + +P A + + + EE+ P + +P+PP AR +PQ
Sbjct: 493 TATEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQ 541
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 382 SATATGASKVKPPAPKATENRVHARCEET*PADRSKKTPAPPDARNQPQ 528
+AT A + +P A + + + EE+ P + +P+PP AR +PQ
Sbjct: 543 TATEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQ 591
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 382 SATATGASKVKPPAPKATENRVHARCEET*PADRSKKTPAPPDARNQPQ 528
+AT A + +P A + + + EE+ P + +P+PP AR +PQ
Sbjct: 543 TATEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQ 591
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 385 ATATGASKVKPPAPKATENRVHA-RCEET-*PADRSKKTPAP-PDARNQPQP 531
ATA A + PAP A E A EET PA ++TPAP P P P
Sbjct: 594 ATAPAAEETPAPAPAADETPAPAPAAEETPAPAPAVEETPAPAPAVEETPAP 645
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 385 ATATGASKVKPPAPKATENRVHARCEET*PADRSKKTPAPPDARNQ-PQP 531
A A A + PAP A E E PA +++TPAP A + P P
Sbjct: 644 APAPAAEETPAPAPAAAEYAAPVAEETPAPAPAAEETPAPAQAAEETPAP 693
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +1
Query: 385 ATATGASKVKPPAPKATENRVHARCEET*PADRSKKTPAPPDARNQP 525
A A A + PAP T A + P + PA P A NQP
Sbjct: 570 AQAAQAQQASTPAPSTTPAPQAASSSQAAPTSGANTQPATPSASNQP 616
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Frame = +1
Query: 319 RLMPQYPPLPAPDRYR*RIH------RSATATGASKVKPPAPKATENRVHARCEET*PAD 480
R P PAP R + R R + ASK PPAPK ++R + +
Sbjct: 320 RRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSP 379
Query: 481 RSKKTPAPPDARNQP 525
+ K+P P R P
Sbjct: 380 SASKSPPAPRRRRSP 394
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Frame = +1
Query: 52 DAVNSPTPCSLTLVDDP-------NQFHGLAADQLTDDIVEQPVSINGIAHNIKRSDF 204
+A+N S L DDP N+F L D + DD+++ + + HN++RS F
Sbjct: 1596 EALNEDDNGSPILYDDPIMGYVGTNRFVSLDMDDMIDDVMKSDDTEEMLVHNLQRSIF 1653
>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
B0416.1 protein.
Length = 1203
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +1
Query: 304 DWSAARLMPQYPPLPAPDRYR*RIHRSATATGASKVKPPAPKATENRVHARCEET*PADR 483
D RL+P PP+P R R+ R S KP P+ R+ P+++
Sbjct: 1117 DDEKGRLIPDRPPIPHSPRELKRLKREKDQQSESGSKPSTPRPPRFRISMSPPRKPPSEK 1176
Query: 484 S 486
+
Sbjct: 1177 N 1177
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical
protein C09H6.1b protein.
Length = 1309
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 235 CLECKFTKSAVILLLHKNKRVNVDWSAARLMPQYPP-LPAPDRYR*RIHRSATATGASKV 411
C C F+ S + L H N N+ + L Q P +P ++ S +TG
Sbjct: 143 CELCDFSASTLKSLTHHN---NIHQNFGVLSQQTSPVIPVASSADSTLNSSINSTGCQIN 199
Query: 412 KPPAPKATE 438
PPAPK E
Sbjct: 200 APPAPKLDE 208
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical
protein C09H6.1a protein.
Length = 1311
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 235 CLECKFTKSAVILLLHKNKRVNVDWSAARLMPQYPP-LPAPDRYR*RIHRSATATGASKV 411
C C F+ S + L H N N+ + L Q P +P ++ S +TG
Sbjct: 143 CELCDFSASTLKSLTHHN---NIHQNFGVLSQQTSPVIPVASSADSTLNSSINSTGCQIN 199
Query: 412 KPPAPKATE 438
PPAPK E
Sbjct: 200 APPAPKLDE 208
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 3.7
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +1
Query: 280 HKNKRVNVDWSAARLMPQYPPLPAPDRYR*RIHRSATATGASKVKPPAPKATENRVHARC 459
+K++ + + A PQ PP P P + + +SA + PPAP + V A
Sbjct: 8 YKSQTTYPESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAP-YPQQAVPAPA 66
Query: 460 EET*P-ADRSKKTPAPPDARNQPQPEIIV 543
P + PAPP A + PQ + V
Sbjct: 67 PPPAPYPQHAVPAPAPPLA-SYPQNAVPV 94
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +2
Query: 332 NIRHYQRQTDTANGFTVQPQPRVPAK*NHLRQKQQKIEYTPGARKRSPPTAQKKRQHRRM 511
+++H Q+Q + PQP+ + Q ++++P ++ Q ++QH++
Sbjct: 460 SLQHPQQQQQQQQYHQMPPQPQHSPYPQQQQMHHQMVQHSPHHYQQQQQQQQYQQQHQQS 519
Query: 512 PGISPSQKLS*SG*NR---FSSAVPCSREAPAMTNSTQ 616
P PS + S S +P S+ P + + TQ
Sbjct: 520 PQF-PSYQQSPQQQQAPPPQRSPIPLSQSLPPLNSMTQ 556
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 379 RSATATGASKVKPPAPKATENRVHARCEET*PADRSKKTPAPPDARNQPQP 531
RSA+ TGA++ +P P + R T PA + A P R P
Sbjct: 324 RSASTTGAARTRPAIPAVSAPRALTSRAPTGPACPTTTRSAAPATRTAVPP 374
>Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical
protein K02C4.5 protein.
Length = 422
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/53 (26%), Positives = 18/53 (33%)
Frame = +1
Query: 373 IHRSATATGASKVKPPAPKATENRVHARCEET*PADRSKKTPAPPDARNQPQP 531
I + SK PP P A + + + D K P PP P P
Sbjct: 166 IEKDERVLAGSKSTPPTPPAIRSHAQLQASPSVAPDTQLKPPRPPIRSAVPDP 218
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 277 LHKNKRVNVDWSAARLMPQYPPLP 348
L N+ + +D+S +L+PQY P P
Sbjct: 1634 LDYNRNLTLDYSRKQLLPQYQPAP 1657
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform b protein.
Length = 1321
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Frame = +3
Query: 99 PKPVPRVSGRPVN*RHRGTAGQHQWHSA*H*TQRF---------HVTSFGYSITLLGVQI 251
P+ V + P+ GT+G H W H F V GY+ + V+
Sbjct: 30 PEKVINTASGPLVALLEGTSGHHHWTETNHPRPTFCNYCREKLNGVPWHGYTCDICKVKA 89
Query: 252 HKKCRYSFT 278
H+KCR + T
Sbjct: 90 HRKCRDNLT 98
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform a protein.
Length = 1372
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Frame = +3
Query: 99 PKPVPRVSGRPVN*RHRGTAGQHQWHSA*H*TQRF---------HVTSFGYSITLLGVQI 251
P+ V + P+ GT+G H W H F V GY+ + V+
Sbjct: 30 PEKVINTASGPLVALLEGTSGHHHWTETNHPRPTFCNYCREKLNGVPWHGYTCDICKVKA 89
Query: 252 HKKCRYSFT 278
H+KCR + T
Sbjct: 90 HRKCRDNLT 98
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Frame = +1
Query: 337 PPLPAPDRYR*RIHRSATATGASKVKPPAPK----ATENRVHARCEET*PADRSKKTPAP 504
P PA + + TG V P AP+ + ET AD + PA
Sbjct: 643 PARPAAQPGNVNVAGTPAPTGTPAVAPAAPRRDLPGAASAATPGAPETAAADATPAPPAK 702
Query: 505 PDARNQPQPEIIVIGI 552
PD +Q ++ IG+
Sbjct: 703 PDLSSQQAVAVLGIGL 718
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,239,324
Number of Sequences: 27780
Number of extensions: 332399
Number of successful extensions: 1239
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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