Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0134.Seq
         (532 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041090-1|AAH41090.1|  239|Homo sapiens NK2 homeobox 8 protein.       32   1.1  
AF000297-1|AAC71082.1|  239|Homo sapiens nk-2-related transcript...    32   1.1  
AF000295-1|AAC71081.1|  239|Homo sapiens nk-2-related transcript...    32   1.1  
BC066965-1|AAH66965.1|  359|Homo sapiens C14orf148 protein protein.    30   4.4  
AF111168-1|AAD09625.1|  250|Homo sapiens unknown protein.              30   4.4  
AC007954-7|AAF62562.1|  250|Homo sapiens unknown protein.              30   4.4  

>BC041090-1|AAH41090.1|  239|Homo sapiens NK2 homeobox 8 protein.
          Length = 239

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 362 ARALGPVET-ELLVEEQLHAGAGLERRVLEGVLAADVRPRG 481
           ARA G  E+ +L    +LHA  GL RRV+  VL  D +P G
Sbjct: 142 ARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCG 182


>AF000297-1|AAC71082.1|  239|Homo sapiens nk-2-related transcription
           factor protein.
          Length = 239

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 362 ARALGPVET-ELLVEEQLHAGAGLERRVLEGVLAADVRPRG 481
           ARA G  E+ +L    +LHA  GL RRV+  VL  D +P G
Sbjct: 142 ARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCG 182


>AF000295-1|AAC71081.1|  239|Homo sapiens nk-2-related transcription
           factor protein.
          Length = 239

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 362 ARALGPVET-ELLVEEQLHAGAGLERRVLEGVLAADVRPRG 481
           ARA G  E+ +L    +LHA  GL RRV+  VL  D +P G
Sbjct: 142 ARAPGAAESPDLAASAELHAAPGLLRRVVVPVLVRDGQPCG 182


>BC066965-1|AAH66965.1|  359|Homo sapiens C14orf148 protein protein.
          Length = 359

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = +2

Query: 23  KVFLFLI*SERRVVIYTSCPKNFFCLLLANIKYRLKRNESLKLKTPTSVNA 175
           +++L+L    R ++I       FFC LL N++  L +N+S +  +  S+N+
Sbjct: 21  RIWLYLQGRSRGLMIEACAHATFFCKLLYNLRASLNKNQSSRHLSIGSLNS 71


>AF111168-1|AAD09625.1|  250|Homo sapiens unknown protein.
          Length = 250

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = +2

Query: 23  KVFLFLI*SERRVVIYTSCPKNFFCLLLANIKYRLKRNESLKLKTPTSVNA 175
           +++L+L    R ++I       FFC LL N++  L +N+S +  +  S+N+
Sbjct: 21  RIWLYLQGRSRGLMIEACAHATFFCKLLYNLRASLNKNQSSRHLSIGSLNS 71


>AC007954-7|AAF62562.1|  250|Homo sapiens unknown protein.
          Length = 250

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = +2

Query: 23  KVFLFLI*SERRVVIYTSCPKNFFCLLLANIKYRLKRNESLKLKTPTSVNA 175
           +++L+L    R ++I       FFC LL N++  L +N+S +  +  S+N+
Sbjct: 21  RIWLYLQGRSRGLMIEACAHATFFCKLLYNLRASLNKNQSSRHLSIGSLNS 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,638,548
Number of Sequences: 237096
Number of extensions: 1160919
Number of successful extensions: 2434
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2434
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)