Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0132.Seq
(745 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 52 3e-07
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 49 3e-06
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 47 1e-05
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 47 2e-05
At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hy... 40 0.002
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 32 0.35
At4g02010.1 68417.m00271 protein kinase family protein contains ... 28 5.7
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei... 28 7.5
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei... 28 7.5
At2g19410.1 68415.m02264 protein kinase family protein contains ... 28 7.5
At4g30230.1 68417.m04299 hypothetical protein 27 9.9
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 27 9.9
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 27 9.9
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 274 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 453
C + +QI E S Y AM AYF D + G AK F +++ EEREHA KL++Y
Sbjct: 97 CEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNK 156
Query: 454 RG 459
RG
Sbjct: 157 RG 158
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 LEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKM 716
+E AL LE V + + + S ND HL D++ EFL EQ + + ++ + L+++
Sbjct: 185 MELALSLEKLVNEKLLN-LHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRV 243
Query: 717 MDKH 728
H
Sbjct: 244 GKGH 247
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +1
Query: 274 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 453
C + +QI E S Y A+ AYF D V G AK F +++ EEREHA L++Y
Sbjct: 95 CEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNK 154
Query: 454 RG 459
RG
Sbjct: 155 RG 156
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = +1
Query: 295 QIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 459
QI E S Y A+ AYF D V GFAK F D++ EER HA ++Y RG
Sbjct: 96 QINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRG 150
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +3
Query: 534 ALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKK 713
A+E AL LE +TN +++ ND LVD++ EFL EQ + + ++ + L++
Sbjct: 176 AMELALSLEK-LTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRR 234
Query: 714 MMDKH 728
+ H
Sbjct: 235 IGKGH 239
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +1
Query: 283 MMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 459
++ +QI E S Y +M AYF D V G AK F +++ EER HA K ++Y RG
Sbjct: 97 VINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRG 155
>At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85
hypothetical protein F9F8.14 - Arabidopsis thaliana,
EMBL:AC009991
Length = 355
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +1
Query: 298 IQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDY 444
I E S Y A+ AY D V GF K F D++ EER +A K ++Y
Sbjct: 297 IDVEYNVSYVYHALDAYIERDNVGLKGFTKFFNDSSLEERGYAEKFMEY 345
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 32.3 bits (70), Expect = 0.35
Identities = 31/121 (25%), Positives = 48/121 (39%)
Frame = +3
Query: 375 RLREAILRCCD*RTRARDQAH*LPAHEGQADRLRNRPHHVQGPRHTSWESGASALEHALK 554
RL EAI R T + D L HE Q + + H G T LE AL
Sbjct: 368 RLEEAIERFNQKETESSDLVEKLKTHENQIEEYKKLAHEASGVADTR----KVELEDALS 423
Query: 555 LESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAA 734
++ ++I E+ C+ ++ SG+ + K +LA S ++ K +A
Sbjct: 424 KLKNLESTIEELGAKCQG-------LEKESGDLAEVNLKLNLELANHGSEANELQTKLSA 476
Query: 735 L 737
L
Sbjct: 477 L 477
>At4g02010.1 68417.m00271 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 725
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 252 SAHHGADLLQHDEETDPGGSGRVNPVLSHGGLLLDRYGEPPRLREAILRCC 404
S+H ++ + ++ G + P S G+L D +PP L +I CC
Sbjct: 103 SSHFSKPSMKRNAQSPGAGLADIAPAQSSNGVLPDALTQPP-LSPSISNCC 152
>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 294
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 522 SGASALEHALKLESDVTNSIREVIKTCESSFN 617
S S H LKL S T+++R + + SSFN
Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68
>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 369
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 522 SGASALEHALKLESDVTNSIREVIKTCESSFN 617
S S H LKL S T+++R + + SSFN
Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68
>At2g19410.1 68415.m02264 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 801
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 495 QGPRHTSWESGASALEHAL-KLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDE 662
+ P TS +S +E + +L++++ +++ + + CE F+ + V LS E+L+E
Sbjct: 297 RSPPETSRKSKKVEIEEEVERLKNELQSTVFKYKQACEELFSTQNKVKMLSTEYLNE 353
>At4g30230.1 68417.m04299 hypothetical protein
Length = 260
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 487 ITYRAPATRRGRAAHQPSSTPSSWR 561
+ + +PA RR R + PS +P SWR
Sbjct: 213 VMFPSPANRRARGSRSPSPSP-SWR 236
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 617 RLPPGRLLVRGIPRRTVQGPARPRRQGLDPQEDDGQARRPRR 742
R PP R +R R ++ P R R + P++ G A R R
Sbjct: 315 RSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGPAGRRGR 356
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 617 RLPPGRLLVRGIPRRTVQGPARPRRQGLDPQEDDGQARRPRR 742
R PP R +R R ++ P R R + P++ G A R R
Sbjct: 322 RSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGPAGRRGR 363
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,716,740
Number of Sequences: 28952
Number of extensions: 268872
Number of successful extensions: 749
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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