Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0128.Seq
(732 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 190 7e-49
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 166 2e-41
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 166 2e-41
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 144 6e-35
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 111 4e-25
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 111 4e-25
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 101 7e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 71 8e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 71 8e-13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 69 5e-12
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 69 5e-12
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 69 5e-12
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.007
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.12
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 32 0.36
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.84
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 31 0.84
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 1.1
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 1.1
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 1.1
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.1
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.5
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.9
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.9
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.6
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.6
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.6
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.6
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC024805-5|AAK39339.1| 494|Caenorhabditis elegans Hypothetical ... 28 5.9
AC024805-4|ABA00170.1| 318|Caenorhabditis elegans Hypothetical ... 28 5.9
AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical ... 28 5.9
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.8
U80023-8|AAG24036.1| 155|Caenorhabditis elegans C-type lectin p... 28 7.8
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 28 7.8
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 28 7.8
AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered cut... 28 7.8
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 28 7.8
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 190 bits (464), Expect = 7e-49
Identities = 112/181 (61%), Positives = 119/181 (65%), Gaps = 4/181 (2%)
Frame = +3
Query: 3 AERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 182
AERE GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFE
Sbjct: 65 AERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFE 124
Query: 183 AGISKNGQTREHALLAFTLGVKQLS*E*TKWIPLNHHTVSPDLRKSRRKYPHTSRRLATT 362
AGISKNGQTREHALLA TLGVKQL + L T SPD +SRR T
Sbjct: 125 AGISKNGQTREHALLAQTLGVKQL-------VSLRSPTRSPD----------SSRRSDTI 167
Query: 363 QLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKL----SIHPATCTP 530
Q L D TETTC C GSRDG + RK L E S +L S H A T
Sbjct: 168 QRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSHHNAQLTD 227
Query: 531 H 533
H
Sbjct: 228 H 228
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 166 bits (403), Expect = 2e-41
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +3
Query: 3 AERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 182
AERE GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFE
Sbjct: 65 AERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFE 124
Query: 183 AGISKNGQTREHALLAFTLGVKQL 254
AGISKNGQTREHALLA TLGVKQL
Sbjct: 125 AGISKNGQTREHALLAQTLGVKQL 148
Score = 142 bits (343), Expect = 3e-34
Identities = 78/161 (48%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Frame = +2
Query: 254 LVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKM 433
+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ M
Sbjct: 149 IVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNM 208
Query: 434 PWFKGWQVERKEGKADGKCLIEALDPSCHLHAPLTSPCVFPCKTYTK--SVVLVPCPSAE 607
PWFKGW VERKEG A GK L+EALD P P P + K + VP E
Sbjct: 209 PWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVE 268
Query: 608 LKLVC*NQVXXXXXXXXXXXXXXXXWRCTTKLFQEAVPGDN 730
++ V + EAVPGDN
Sbjct: 269 TGIIKPGMVVTFAPQNVTTEVKSVEMH--HESLPEAVPGDN 307
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 166 bits (403), Expect = 2e-41
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +3
Query: 3 AERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 182
AERE GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFE
Sbjct: 65 AERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFE 124
Query: 183 AGISKNGQTREHALLAFTLGVKQL 254
AGISKNGQTREHALLA TLGVKQL
Sbjct: 125 AGISKNGQTREHALLAQTLGVKQL 148
Score = 142 bits (343), Expect = 3e-34
Identities = 78/161 (48%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Frame = +2
Query: 254 LVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKM 433
+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ M
Sbjct: 149 IVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNM 208
Query: 434 PWFKGWQVERKEGKADGKCLIEALDPSCHLHAPLTSPCVFPCKTYTK--SVVLVPCPSAE 607
PWFKGW VERKEG A GK L+EALD P P P + K + VP E
Sbjct: 209 PWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVE 268
Query: 608 LKLVC*NQVXXXXXXXXXXXXXXXXWRCTTKLFQEAVPGDN 730
++ V + EAVPGDN
Sbjct: 269 TGIIKPGMVVTFAPQNVTTEVKSVEMH--HESLPEAVPGDN 307
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 144 bits (349), Expect = 6e-35
Identities = 79/165 (47%), Positives = 91/165 (55%), Gaps = 2/165 (1%)
Frame = +2
Query: 242 CQTALVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 421
C +V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE
Sbjct: 111 CAVLVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEV 170
Query: 422 STKMPWFKGWQVERKEGKADGKCLIEALDPSCHLHAPLTSPCVFPCKTYTK--SVVLVPC 595
S+ MPWFKGW VERKEG A GK L+EALD P P P + K + VP
Sbjct: 171 SSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPV 230
Query: 596 PSAELKLVC*NQVXXXXXXXXXXXXXXXXWRCTTKLFQEAVPGDN 730
E ++ V + EAVPGDN
Sbjct: 231 GRVETGIIKPGMVVTFAPQNVTTEVKSVEMH--HESLPEAVPGDN 273
Score = 109 bits (261), Expect = 3e-24
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +3
Query: 3 AERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 161
AERE GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 65 AERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 111 bits (268), Expect = 4e-25
Identities = 52/83 (62%), Positives = 62/83 (74%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
ERE G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 229 ERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFET 288
Query: 186 GISKNGQTREHALLAFTLGVKQL 254
G GQT+EHALL +LGV QL
Sbjct: 289 GFENGGQTKEHALLLRSLGVTQL 311
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = +2
Query: 254 LVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTK 430
+V VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ +
Sbjct: 312 IVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RME 366
Query: 431 MPWFKGWQVERKEGKADGKCLIEALDPSCHLHAPLTSP 544
+ W+ DG CL+E +D P P
Sbjct: 367 LDWY------------DGPCLLELIDSFVAPQPPSDGP 392
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 508 SILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG-VLKPGTIVVFAPANITT 669
S + P P+D PLR+ + DV K+ V G++E+G V K + + + T
Sbjct: 381 SFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSSVTAAT 435
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 111 bits (268), Expect = 4e-25
Identities = 52/83 (62%), Positives = 62/83 (74%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
ERE G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 247 ERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFET 306
Query: 186 GISKNGQTREHALLAFTLGVKQL 254
G GQT+EHALL +LGV QL
Sbjct: 307 GFENGGQTKEHALLLRSLGVTQL 329
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = +2
Query: 254 LVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTK 430
+V VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ +
Sbjct: 330 IVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RME 384
Query: 431 MPWFKGWQVERKEGKADGKCLIEALDPSCHLHAPLTSP 544
+ W+ DG CL+E +D P P
Sbjct: 385 LDWY------------DGPCLLELIDSFVAPQPPSDGP 410
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 508 SILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG-VLKPGTIVVFAPANITT 669
S + P P+D PLR+ + DV K+ V G++E+G V K + + + T
Sbjct: 399 SFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSSVTAAT 453
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 101 bits (241), Expect = 7e-22
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
ERE G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE
Sbjct: 168 EREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFET 227
Query: 186 GISKNGQTREHALLAFTLGVKQL 254
G + GQTREH++L T GVK L
Sbjct: 228 GFDRGGQTREHSMLVKTAGVKHL 250
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +2
Query: 263 VNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPST--KM 433
VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG G + + T +
Sbjct: 254 VNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSEG 313
Query: 434 PWFKG 448
W+ G
Sbjct: 314 NWYSG 318
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 70.9 bits (166), Expect = 8e-13
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
E++ GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 89 EKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME- 147
Query: 186 GISKNGQTREHALLAFTLGVKQLS 257
QT+EH +LA +GVK ++
Sbjct: 148 ------QTKEHLILAKQVGVKNMA 165
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 508 SILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 633
S+ P R +P+ I G GTV VG +E GVLK G
Sbjct: 228 SLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKG 269
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 70.9 bits (166), Expect = 8e-13
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
E++ GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 89 EKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME- 147
Query: 186 GISKNGQTREHALLAFTLGVKQLS 257
QT+EH +LA +GVK ++
Sbjct: 148 ------QTKEHLILAKQVGVKNMA 165
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 508 SILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 633
S+ P R +P+ I G GTV VG +E GVLK G
Sbjct: 228 SLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKG 269
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 68.5 bits (160), Expect = 5e-12
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
E+ GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 93 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 151
Query: 186 GISKNGQTREHALLAFTLGV 245
QTREH LLA +GV
Sbjct: 152 ------QTREHLLLARQVGV 165
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 502 SRSILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVK 678
++ ++P + ++P+ + VY I G GTV G++E G+LK G I + T VK
Sbjct: 239 NKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVK 297
Query: 679 SV 684
SV
Sbjct: 298 SV 299
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 68.5 bits (160), Expect = 5e-12
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
E+ GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 152
Query: 186 GISKNGQTREHALLAFTLGV 245
QTREH LLA +GV
Sbjct: 153 ------QTREHLLLARQVGV 166
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 502 SRSILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVK 678
++ ++P + ++P+ + VY I G GTV G++E G+LK G I + T VK
Sbjct: 240 NKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVK 298
Query: 679 SV 684
SV
Sbjct: 299 SV 300
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 68.5 bits (160), Expect = 5e-12
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
E+ GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 152
Query: 186 GISKNGQTREHALLAFTLGV 245
QTREH LLA +GV
Sbjct: 153 ------QTREHLLLARQVGV 166
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 502 SRSILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVK 678
++ ++P + ++P+ + VY I G GTV G++E G+LK G I + T VK
Sbjct: 240 NKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVK 298
Query: 679 SV 684
SV
Sbjct: 299 SV 300
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
ERE GIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 83 ERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 18 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
GIT I + E +K VT +D PGH F G AD VL+VAA G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
ER+ GITI A + + IID PGH DF + D AVL++ G G
Sbjct: 93 ERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
ERE GIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 71 ERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 69 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 230
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLA 120
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 511 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVE 687
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 191 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 511 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVE 687
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 150 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 208
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 508 SILPPARPTDK--PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 660
+I+P R ++ P + D+Y + G+GT+ G + +G ++ I++ P +
Sbjct: 359 NIVPLRRQLNENDPAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTS 411
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -1
Query: 591 GTNTTDFVYVLQGKTQGLVSGACRW-QDGSRASMRHFPSALPSLRSTCHPLNQGILVEGS 415
GT+TT + + + + S + W DG R + P LR+T PL+ G L E
Sbjct: 505 GTSTTPMFPIPIARYEQVNSSSSMWPMDGQRRPSTSDHTTTPQLRTTAAPLSPGRLSEQQ 564
Query: 414 N 412
N
Sbjct: 565 N 565
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 27 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 27 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +1
Query: 541 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 660
P + D+Y + G+GT+ G + +G ++ I++ P +
Sbjct: 373 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTS 412
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 66 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 161
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 24 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 24 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 75 IIDAPGHRDFIKNMITGTSQADCAVLIV 158
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 333 PHTSRRLATTQLLSLSCPFLD 395
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 333 PHTSRRLATTQLLSLSCPFLD 395
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 333 PHTSRRLATTQLLSLSCPFLD 395
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 333 PHTSRRLATTQLLSLSCPFLD 395
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 158
E+ GIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 158
E+ GIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -2
Query: 641 TMVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLSVGRAGGRMDREL 498
++V G N + +PT T P+ P + +S R +R S G M + L
Sbjct: 332 SLVEGLNGSPTPIPTVTDPVNPTVNSSTRRKRHSSSKSSNGKSMHQVL 379
>AC024805-5|AAK39339.1| 494|Caenorhabditis elegans Hypothetical
protein Y51H7C.6b protein.
Length = 494
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 571 CIRLAGE--DAGACQWGVQVAGWIESFNEAFSVSFAFLTLHLPSLEPRHF 428
C++LAG+ D G C G+ A E F A FLTL + R F
Sbjct: 133 CLQLAGDMRDLGVCAEGIDDAIRSEDFETASQHIHRFLTLDQAVFQIREF 182
>AC024805-4|ABA00170.1| 318|Caenorhabditis elegans Hypothetical
protein Y51H7C.6c protein.
Length = 318
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 571 CIRLAGE--DAGACQWGVQVAGWIESFNEAFSVSFAFLTLHLPSLEPRHF 428
C++LAG+ D G C G+ A E F A FLTL + R F
Sbjct: 133 CLQLAGDMRDLGVCAEGIDDAIRSEDFETASQHIHRFLTLDQAVFQIREF 182
>AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical
protein Y51H7C.6a protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 571 CIRLAGE--DAGACQWGVQVAGWIESFNEAFSVSFAFLTLHLPSLEPRHF 428
C++LAG+ D G C G+ A E F A FLTL + R F
Sbjct: 133 CLQLAGDMRDLGVCAEGIDDAIRSEDFETASQHIHRFLTLDQAVFQIREF 182
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 69 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 164
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>U80023-8|AAG24036.1| 155|Caenorhabditis elegans C-type lectin
protein 45 protein.
Length = 155
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -1
Query: 615 SFNSADGHGTNTTDFVYVLQGKTQGLVSGACRWQDGSRASMRHFPSALPS 466
SF +A G N D+ LQ T S +C W DGS+ S F P+
Sbjct: 73 SFATASATG-NDKDYWLGLQCTTAS--SSSCNWADGSKFSFDGFAEGQPN 119
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 452 QVERKEGKADGKCLIEALDPSCHLHAPLTSPCVFPCKTYTKSVVLVPCPSAEL 610
Q R +G + KC ++ D + +L C C T TK+ V CP + L
Sbjct: 328 QTLRNKGGSGFKC-VQKCDDTYYLDGDKCKMCSSHCHTCTKAEVCETCPGSLL 379
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Frame = -2
Query: 254 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 96
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 95 VSRSINDGNIVLASFELPE---SNIDCDTQLTL 6
S S +D I S SN+D L++
Sbjct: 84 FSGSKSDAEIPSTSNRCESFKWSNLDYSKYLSI 116
>AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered
cuticle protein 4, isoformc protein.
Length = 827
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 452 QVERKEGKADGKCLIEALDPSCHLHAPLTSPCVFPCKTYTKSVVLVPCPSAEL 610
Q R +G + KC ++ D + +L C C T TK+ V CP + L
Sbjct: 700 QTLRNKGGSGFKC-VQKCDDTYYLDGDKCKMCSSHCHTCTKAEVCETCPGSLL 751
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 452 QVERKEGKADGKCLIEALDPSCHLHAPLTSPCVFPCKTYTKSVVLVPCPSAEL 610
Q R +G + KC ++ D + +L C C T TK+ V CP + L
Sbjct: 700 QTLRNKGGSGFKC-VQKCDDTYYLDGDKCKMCSSHCHTCTKAEVCETCPGSLL 751
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,585,384
Number of Sequences: 27780
Number of extensions: 422928
Number of successful extensions: 1378
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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