Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0128.Seq
(732 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 93 2e-19
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 91 9e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 68 6e-12
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 66 2e-11
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 41 0.001
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 41 0.001
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 36 0.021
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 35 0.064
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.064
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.064
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.20
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.26
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.26
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.34
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.34
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.45
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.45
At5g13650.2 68418.m01585 elongation factor family protein contai... 31 0.79
At5g13650.1 68418.m01584 elongation factor family protein contai... 31 0.79
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.8
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.8
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.8
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.4
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.4
At2g39560.1 68415.m04853 expressed protein 29 4.2
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.6
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.6
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 7.3
At1g76530.1 68414.m08906 auxin efflux carrier family protein con... 28 7.3
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 7.3
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 9.7
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 9.7
At5g13580.1 68418.m01570 ABC transporter family protein 27 9.7
At4g39400.1 68417.m05577 brassinosteroid insensitive 1 (BRI1) id... 27 9.7
At4g01910.1 68417.m00251 DC1 domain-containing protein contains ... 27 9.7
At3g61830.1 68416.m06941 transcriptional factor B3 family protei... 27 9.7
At1g35610.1 68414.m04421 DC1 domain-containing protein contains ... 27 9.7
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +3
Query: 3 AERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 182
AERE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FE
Sbjct: 65 AERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
Query: 183 AGISKNGQTREHALLAFTLGVKQL 254
AGISK+GQTREHALLAFTLGVKQ+
Sbjct: 125 AGISKDGQTREHALLAFTLGVKQM 148
Score = 116 bits (279), Expect = 2e-26
Identities = 51/62 (82%), Positives = 57/62 (91%)
Frame = +1
Query: 520 PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 699
P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE
Sbjct: 226 PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHE 285
Query: 700 AL 705
+L
Sbjct: 286 SL 287
Score = 94.3 bits (224), Expect = 7e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +2
Query: 266 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 445
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 446 G 448
G
Sbjct: 213 G 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +3
Query: 3 AERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 182
AERE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FE
Sbjct: 65 AERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
Query: 183 AGISKNGQTREHALLAFTLGVKQL 254
AGISK+GQTREHALLAFTLGVKQ+
Sbjct: 125 AGISKDGQTREHALLAFTLGVKQM 148
Score = 116 bits (279), Expect = 2e-26
Identities = 51/62 (82%), Positives = 57/62 (91%)
Frame = +1
Query: 520 PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 699
P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE
Sbjct: 226 PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHE 285
Query: 700 AL 705
+L
Sbjct: 286 SL 287
Score = 94.3 bits (224), Expect = 7e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +2
Query: 266 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 445
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 446 G 448
G
Sbjct: 213 G 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +3
Query: 3 AERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 182
AERE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FE
Sbjct: 65 AERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
Query: 183 AGISKNGQTREHALLAFTLGVKQL 254
AGISK+GQTREHALLAFTLGVKQ+
Sbjct: 125 AGISKDGQTREHALLAFTLGVKQM 148
Score = 116 bits (279), Expect = 2e-26
Identities = 51/62 (82%), Positives = 57/62 (91%)
Frame = +1
Query: 520 PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 699
P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE
Sbjct: 226 PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHE 285
Query: 700 AL 705
+L
Sbjct: 286 SL 287
Score = 94.3 bits (224), Expect = 7e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +2
Query: 266 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 445
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 446 G 448
G
Sbjct: 213 G 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +3
Query: 3 AERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 182
AERE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FE
Sbjct: 65 AERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
Query: 183 AGISKNGQTREHALLAFTLGVKQL 254
AGISK+GQTREHALLAFTLGVKQ+
Sbjct: 125 AGISKDGQTREHALLAFTLGVKQM 148
Score = 116 bits (279), Expect = 2e-26
Identities = 51/62 (82%), Positives = 57/62 (91%)
Frame = +1
Query: 520 PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHE 699
P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +TTEVKSVEMHHE
Sbjct: 226 PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHE 285
Query: 700 AL 705
+L
Sbjct: 286 SL 287
Score = 94.3 bits (224), Expect = 7e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +2
Query: 266 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 445
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 446 G 448
G
Sbjct: 213 G 213
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/83 (51%), Positives = 56/83 (67%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
ER G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE
Sbjct: 160 ERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFET 219
Query: 186 GISKNGQTREHALLAFTLGVKQL 254
G + GQTREH LA TLGV +L
Sbjct: 220 GYERGGQTREHVQLAKTLGVSKL 242
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +2
Query: 254 LVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK 430
+V VNKMD +S+ R++EI++++ ++K GYN V F+PISG G NM + +
Sbjct: 243 IVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQ 302
Query: 431 --MPWFKG 448
PW+ G
Sbjct: 303 EICPWWSG 310
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +1
Query: 508 SILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVE 687
SI P R + P R+P+ D +K +GTV +G+VE+G ++ G +V P +V ++
Sbjct: 319 SIEIPPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIY 376
Query: 688 MHHEALPRS 714
+ + R+
Sbjct: 377 CDEDKVKRA 385
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 90.6 bits (215), Expect = 9e-19
Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
ERE GIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEA
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357
Query: 186 GISK-NGQTREHALLAFTLGVKQL 254
G GQTREHA + GV+Q+
Sbjct: 358 GFDNLKGQTREHARVLRGFGVEQV 381
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +2
Query: 245 QTALVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EP 421
+ +V +NKMD YS+ RF+ IK+ V S+++ + +++ ++P+S N++ P
Sbjct: 379 EQVIVAINKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAP 436
Query: 422 STKMPWFKGWQVERKEGKADGKCLIEALDPSCHLHAPLTSPCVFP 556
S W G CL++A+D ++ P + P
Sbjct: 437 SDNR--LSSWY--------QGPCLLDAVDSVKSPDRDVSKPLLMP 471
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 68.1 bits (159), Expect = 6e-12
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
ER GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 123 ERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP- 181
Query: 186 GISKNGQTREHALLAFTLGVKQL 254
QT+EH LLA +GV +
Sbjct: 182 ------QTKEHILLAKQVGVPDM 198
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 520 PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTE--VKSVEMH 693
P R T+ P L ++DV+ I G GTV GRVE G +K G V T V VEM
Sbjct: 280 PQRQTELPFLLAVEDVFSITGRGTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMF 339
Query: 694 HEAL 705
+ L
Sbjct: 340 QKIL 343
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
E++ GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 111 EKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP- 169
Query: 186 GISKNGQTREHALLAFTLGVKQL 254
QT+EH LLA +GV L
Sbjct: 170 ------QTKEHILLARQVGVPSL 186
Score = 50.8 bits (116), Expect = 9e-07
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = +1
Query: 466 GRQS*RKMPH*SSRSILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 633
GRQ+ K+ I P R DKP +P++DV+ I G GTV GR+E GV+K G
Sbjct: 242 GRQAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVG 297
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/71 (35%), Positives = 33/71 (46%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
ERE GITI A Y V IID PGH DF + D A+L++ + G
Sbjct: 114 EREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQ 173
Query: 186 GISKNGQTREH 218
I+ + Q R +
Sbjct: 174 SITVDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/71 (35%), Positives = 33/71 (46%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 185
ERE GITI A Y V IID PGH DF + D A+L++ + G
Sbjct: 114 EREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQ 173
Query: 186 GISKNGQTREH 218
I+ + Q R +
Sbjct: 174 SITVDRQMRRY 184
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 6 ERELGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
ERE GITI + + +E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 129 ERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 34.7 bits (76), Expect = 0.064
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
E+ IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 55 EQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.064
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 21 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.064
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 21 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 51 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +1
Query: 511 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 690
I PP ++ PLR+ L D + G + V G+L G V FA + + EV V +
Sbjct: 244 IPPPPGISESPLRMLLFDSFFNEYKGVICYVSVVDGMLSKGDKVSFAASGQSYEVLDVGI 303
Query: 691 HHEAL 705
H L
Sbjct: 304 MHPEL 308
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 69 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
E+E GITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 142 EQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 54 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 164
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 54 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 164
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 66 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 164
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +3
Query: 48 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 164
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 31.1 bits (67), Expect = 0.79
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
ERE GITI V IID PGH DF + + D +L+V + G
Sbjct: 127 ERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 31.1 bits (67), Expect = 0.79
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +3
Query: 6 ERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
ERE GITI V IID PGH DF + + D +L+V + G
Sbjct: 126 ERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 181
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 75 IIDAPGHRDFIKNMITGTSQADCAVLIV 158
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 75 IIDAPGHRDFIKNMITGTSQADCAVLIV 158
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 75 IIDAPGHRDFIKNMITGTSQADCAVLIV 158
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 57 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 158
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 69 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 158
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At2g39560.1 68415.m04853 expressed protein
Length = 233
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 638 MVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLS 534
+ P + TP ++ T P+ P+L SC GR+ +S
Sbjct: 144 ITPPYLTPRASPSLFTPPLTPLLMESCNGRKEEIS 178
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 349 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 450
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 296 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 385
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 302 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 412
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At1g76530.1 68414.m08906 auxin efflux carrier family protein
contains auxin efflux carrier domain, Pfam:PF03547
Length = 415
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 224 ARFHPRCQTALVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG----YNPAAVAFV 382
+ + C+ L+ + + E + R+EE+K+ V S KK+ + PA +A +
Sbjct: 201 SNYDDSCKVQLISSKEEEKEEDNHQVGRWEEVKQRVVSLSKKVNLGSIFAPATIAAI 257
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 78 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 173
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 278 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 391
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 278 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 391
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g13580.1 68418.m01570 ABC transporter family protein
Length = 727
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 689 ISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVP 585
IS ++ +++GA TT ++PVST+PT P
Sbjct: 384 ISASISKGKLVSGATTTTHSSGSSPVSTIPTFANP 418
>At4g39400.1 68417.m05577 brassinosteroid insensitive 1 (BRI1)
identical to GI:2392895
Length = 1196
Score = 27.5 bits (58), Expect = 9.7
Identities = 26/87 (29%), Positives = 36/87 (41%)
Frame = -1
Query: 555 GKTQGLVSGACRWQDGSRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCHPEMGTK 376
G+ +SGAC G S HF A+P +C L L SN S P M T
Sbjct: 305 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES--LALSSNNFSGELP-MDTL 361
Query: 375 ATAAGL*PIFLMYEDTSFLISSNLGSL 295
GL + L + + S + +L +L
Sbjct: 362 LKMRGLKVLDLSFNEFSGELPESLTNL 388
>At4g01910.1 68417.m00251 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 651
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 618 CVETRYHCCLCPRQHHY*SQVC 683
C R+HC LC R+ +Y S C
Sbjct: 73 CSNLRFHCDLCGRRTNYLSYYC 94
>At3g61830.1 68416.m06941 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profile: PF02309 AUX/IAA family
Length = 602
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -2
Query: 281 WNPFCLLLRELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHS 144
WN FC + +++F + + M T L + E G S++ S
Sbjct: 555 WNEFCKMAKKIFIYSSDEVKKMTTKLKISSSLENEEYGNESFENRS 600
>At1g35610.1 68414.m04421 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 612
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 634 YLVSTHQFQLCRRARYQYHRFCIRLA 557
Y + +HQF C++ Y H C L+
Sbjct: 334 YPIVSHQFYHCKKCNYSLHEVCAGLS 359
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,799,851
Number of Sequences: 28952
Number of extensions: 406282
Number of successful extensions: 1394
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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