BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0117.Seq
(755 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY825668-1|AAV70231.1| 168|Anopheles gambiae olfactory receptor... 25 1.9
AY825682-1|AAV70245.1| 165|Anopheles gambiae olfactory receptor... 25 3.3
AY825660-1|AAV70223.1| 163|Anopheles gambiae olfactory receptor... 24 4.4
AY825659-1|AAV70222.1| 163|Anopheles gambiae olfactory receptor... 24 4.4
AY825654-1|AAV70217.1| 167|Anopheles gambiae olfactory receptor... 24 4.4
AY825653-1|AAV70216.1| 167|Anopheles gambiae olfactory receptor... 24 4.4
AY825646-1|AAV70209.1| 168|Anopheles gambiae olfactory receptor... 24 4.4
AY825645-1|AAV70208.1| 168|Anopheles gambiae olfactory receptor... 24 4.4
>AY825668-1|AAV70231.1| 168|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 168
Score = 25.4 bits (53), Expect = 1.9
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -2
Query: 667 IDQIKAALNGPVNECTRRAAVREEWRRL 584
+D+++ LN P+ +++VRE+W +L
Sbjct: 139 LDELEKMLNDPLTMKKNQSSVREKWVQL 166
>AY825682-1|AAV70245.1| 165|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 165
Score = 24.6 bits (51), Expect = 3.3
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 667 IDQIKAALNGPVNECTRRAAVREEW 593
+D+++ LN P+ +++VRE+W
Sbjct: 136 LDELEKMLNDPLTMKKNQSSVREKW 160
>AY825660-1|AAV70223.1| 163|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 163
Score = 24.2 bits (50), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 667 IDQIKAALNGPVNECTRRAAVREEWRRL 584
+ +++ LN P+ +++VRE+W RL
Sbjct: 135 LGELEKMLNDPLTMKKNQSSVREKWVRL 162
>AY825659-1|AAV70222.1| 163|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 163
Score = 24.2 bits (50), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 667 IDQIKAALNGPVNECTRRAAVREEWRRL 584
+ +++ LN P+ +++VRE+W RL
Sbjct: 135 LGELEKMLNDPLTMKKNQSSVREKWVRL 162
>AY825654-1|AAV70217.1| 167|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 167
Score = 24.2 bits (50), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 667 IDQIKAALNGPVNECTRRAAVREEWRRL 584
+ +++ LN P+ +++VRE+W RL
Sbjct: 138 LGELEKMLNDPLTMKKNQSSVREKWVRL 165
>AY825653-1|AAV70216.1| 167|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 167
Score = 24.2 bits (50), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 667 IDQIKAALNGPVNECTRRAAVREEWRRL 584
+ +++ LN P+ +++VRE+W RL
Sbjct: 138 LGELEKMLNDPLTVKKNQSSVREKWVRL 165
>AY825646-1|AAV70209.1| 168|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 168
Score = 24.2 bits (50), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 667 IDQIKAALNGPVNECTRRAAVREEWRRL 584
+ +++ LN P+ +++VRE+W RL
Sbjct: 139 LGELEKMLNDPLTMKKNQSSVREKWVRL 166
>AY825645-1|AAV70208.1| 168|Anopheles gambiae olfactory receptor
GPRor70 protein.
Length = 168
Score = 24.2 bits (50), Expect = 4.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 667 IDQIKAALNGPVNECTRRAAVREEWRRL 584
+ +++ LN P+ +++VRE+W RL
Sbjct: 139 LGELEKMLNDPLTMKKNQSSVREKWVRL 166
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,244
Number of Sequences: 2352
Number of extensions: 15246
Number of successful extensions: 78
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -