Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0116X.Seq
         (409 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY748849-1|AAV28195.1|  106|Anopheles gambiae cytochrome P450 pr...    25   1.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   1.9  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    22   7.5  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    22   9.9  

>AY748849-1|AAV28195.1|  106|Anopheles gambiae cytochrome P450
           protein.
          Length = 106

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 220 ENFIQNDPTTIRLSFPTGSRSC 285
           E F+Q  P    L F TG RSC
Sbjct: 61  ERFLQEPPPYSYLPFSTGVRSC 82


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 19  YCPYCDTRTGHRRTDLLHTDNTTRTKRNTL 108
           YC YCDT   H    +  T  T R  ++ +
Sbjct: 5   YCDYCDTYLTHDSPSVRKTHCTGRKHKDNV 34


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 322 RVTSRSRHXGDRPARRRSPL 381
           +++ +S H  + PARR+S L
Sbjct: 45  KISQQSHHSEEGPARRKSNL 64


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 310 DVITTFKNNTTSIQWEMRGGSWLGRSE*NFHKSF 209
           ++I+ FKNN  SIQ E+     L ++  +  KSF
Sbjct: 864 EIISDFKNNVFSIQ-EVEQLVTLWKNRNDVQKSF 896


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,465
Number of Sequences: 2352
Number of extensions: 6347
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)