Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0116X.Seq
         (409 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118689-1|AAM50549.1|  893|Drosophila melanogaster AT15637p pro...    27   9.5  
AE014298-1100|AAN09223.1|  341|Drosophila melanogaster CG2212-PB...    27   9.5  
AE013599-3102|AAM68188.1|  889|Drosophila melanogaster CG10543-P...    27   9.5  
AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-P...    27   9.5  
AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-P...    27   9.5  

>AY118689-1|AAM50549.1|  893|Drosophila melanogaster AT15637p
           protein.
          Length = 893

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 19  YCPYCDTRTGHRRTDLLHTDNTTRTKRNTLFCVHC 123
           YC  C  R G+   +++H + T   K     C  C
Sbjct: 5   YCHDCGQRNGNTLEEIIHHNRTMHVKEFPFVCETC 39


>AE014298-1100|AAN09223.1|  341|Drosophila melanogaster CG2212-PB,
           isoform B protein.
          Length = 341

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 25  PYCDTRTGHRRTDLLHTDNTTRTKRNTLFCVHCALYD 135
           P+CD R GH   D  +T+N      + L   H    D
Sbjct: 9   PFCDYRDGHLLLDGCYTNNVPADVMHNLGAAHIIAID 45


>AE013599-3102|AAM68188.1|  889|Drosophila melanogaster CG10543-PB,
           isoform B protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 19  YCPYCDTRTGHRRTDLLHTDNTTRTKRNTLFCVHC 123
           YC  C  R G+   +++H + T   K     C  C
Sbjct: 5   YCHDCGQRNGNTLEEIIHHNRTMHVKEFPFVCETC 39


>AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-PC,
           isoform C protein.
          Length = 1024

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 19  YCPYCDTRTGHRRTDLLHTDNTTRTKRNTLFCVHC 123
           YC  C  R G+   +++H + T   K     C  C
Sbjct: 140 YCHDCGQRNGNTLEEIIHHNRTMHVKEFPFVCETC 174


>AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-PA,
           isoform A protein.
          Length = 1634

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 19  YCPYCDTRTGHRRTDLLHTDNTTRTKRNTLFCVHC 123
           YC  C  R G+   +++H + T   K     C  C
Sbjct: 750 YCHDCGQRNGNTLEEIIHHNRTMHVKEFPFVCETC 784


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,326,901
Number of Sequences: 53049
Number of extensions: 299782
Number of successful extensions: 633
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)