Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0114.Seq
(575 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 45 8e-05
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 45 8e-05
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 45 8e-05
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 45 8e-05
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 45 8e-05
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 45 8e-05
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 42 5e-04
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 42 5e-04
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 42 6e-04
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 41 0.001
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 41 0.001
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 40 0.002
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 40 0.002
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 40 0.002
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 40 0.002
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 40 0.002
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 39 0.006
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 38 0.007
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 38 0.013
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 38 0.013
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 36 0.030
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 35 0.069
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 34 0.16
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 34 0.16
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 32 0.48
BT021315-1|AAX33463.1| 808|Drosophila melanogaster RE10908p pro... 29 6.0
BT012431-1|AAS93702.1| 852|Drosophila melanogaster RH69719p pro... 29 6.0
BT011466-1|AAR99124.1| 852|Drosophila melanogaster RE25460p pro... 29 6.0
BT006026-1|AAO85560.1| 833|Drosophila melanogaster RE14149p pro... 29 6.0
AY060693-1|AAL28241.1| 629|Drosophila melanogaster GH13403p pro... 29 6.0
AF132163-1|AAD34751.1| 855|Drosophila melanogaster unknown prot... 29 6.0
AE014297-4333|AAN14159.1| 836|Drosophila melanogaster CG1709-PD... 29 6.0
AE014297-4332|AAN14158.1| 836|Drosophila melanogaster CG1709-PB... 29 6.0
AE014297-4331|AAN14157.1| 850|Drosophila melanogaster CG1709-PG... 29 6.0
AE014297-4330|AAN14156.1| 833|Drosophila melanogaster CG1709-PF... 29 6.0
AE014297-4329|AAN14155.1| 833|Drosophila melanogaster CG1709-PA... 29 6.0
AE014297-4328|AAN14154.1| 855|Drosophila melanogaster CG1709-PE... 29 6.0
AE014297-4327|AAF56861.1| 855|Drosophila melanogaster CG1709-PC... 29 6.0
AE013599-1874|AAF58258.1| 808|Drosophila melanogaster CG8613-PA... 29 6.0
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/59 (42%), Positives = 32/59 (54%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSDTMTINA 196
V+LDI AFD VWH LL KL G P L K + +FL R +V ++ S +NA
Sbjct: 606 VTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNA 664
Score = 31.1 bits (67), Expect = 1.1
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Frame = +3
Query: 189 LTLTVPQGSVLSPTLFILYINDC-----CLLMAYIAMQMTARGMRDISAIRVSLGAWCKR 353
L VPQGSVL PTLF ++ +D C+L + S I S+ ++
Sbjct: 662 LNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNE 721
Query: 354 DDQNLCLKWRTLXGESPNGVN*TWFNSTR-*RHKFARSLR-RRTPLSWRRNSKDIPATF 524
D KW+ +PN N +F R R+ R LR +P+ W N + + F
Sbjct: 722 LD-IYYKKWKIKI--NPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIF 777
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGD 169
A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+
Sbjct: 181 ATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGE 230
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGD 169
A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGE 677
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGD 169
A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGE 677
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGD 169
A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGE 677
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/59 (42%), Positives = 32/59 (54%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSDTMTINA 196
V+LDI AFD VWH LL KL G P L K + +FL R +V ++ S +NA
Sbjct: 554 VTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNA 612
Score = 31.1 bits (67), Expect = 1.1
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Frame = +3
Query: 189 LTLTVPQGSVLSPTLFILYINDC-----CLLMAYIAMQMTARGMRDISAIRVSLGAWCKR 353
L VPQGSVL PTLF ++ +D C+L + S I S+ ++
Sbjct: 610 LNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNE 669
Query: 354 DDQNLCLKWRTLXGESPNGVN*TWFNSTR-*RHKFARSLR-RRTPLSWRRNSKDIPATF 524
D KW+ +PN N +F R R+ R LR +P+ W N + + F
Sbjct: 670 LD-IYYKKWKIKI--NPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIF 725
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 42.3 bits (95), Expect = 5e-04
Identities = 28/65 (43%), Positives = 33/65 (50%)
Frame = +2
Query: 2 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSDT 181
K A+ LDI +AFDRVWH LL K P L + SFL+ R+ V VDG S
Sbjct: 577 KEYAVGAFLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSI 635
Query: 182 MTINA 196
I A
Sbjct: 636 KPIAA 640
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 186 PLTLTVPQGSVLSPTLFILYIND 254
P+ VPQGSVL PTL+ ++ +D
Sbjct: 637 PIAAGVPQGSVLGPTLYSVFASD 659
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 42.3 bits (95), Expect = 5e-04
Identities = 28/65 (43%), Positives = 33/65 (50%)
Frame = +2
Query: 2 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSDT 181
K A+ LDI +AFDRVWH LL K P L + SFL+ R+ V VDG S
Sbjct: 379 KEYAVGAFLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSI 437
Query: 182 MTINA 196
I A
Sbjct: 438 KPIAA 442
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 186 PLTLTVPQGSVLSPTLFILYIND 254
P+ VPQGSVL PTL+ ++ +D
Sbjct: 439 PIAAGVPQGSVLGPTLYSVFASD 461
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSDTMTINA 196
A+ LD+A+AFDRVW L+ K+ +P+ + K + S+LD R V S TI A
Sbjct: 117 ALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEA 175
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 201 VPQGSVLSPTLFILYIND 254
VPQGSVL P L+ LY D
Sbjct: 177 VPQGSVLGPILYTLYTAD 194
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVD-GDCSDTMTIN 193
AV LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S T I
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIG 683
Query: 194 A 196
A
Sbjct: 684 A 684
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVD-GDCSDTMTIN 193
AV LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S T I
Sbjct: 637 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIG 695
Query: 194 A 196
A
Sbjct: 696 A 696
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTV 154
AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 509 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEV 553
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTV 154
AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEV 669
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTV 154
AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEV 669
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTV 154
AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 587 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEV 631
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTV 154
AV LDI++AFDRVWH LL KL +P L + S+L R+ V
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEV 669
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 38.7 bits (86), Expect = 0.006
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 2/188 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSDTMTINA 196
AV +D+ +AFDRVWH L+SK+ P + S+L+ R V V S + A
Sbjct: 581 AVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRA 639
Query: 197 DRSTRFGALPHAFHPVYQ*LLSIDGIHCYADDSTG-DARYIGHQSLSRSMVQERRSKLVS 373
+ L + V+ L + AD A Y +L S ++
Sbjct: 640 G-VPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYS--SNCCNEAAR 696
Query: 374 EVENSXGRVSEWGELNLVQFNPIKTQVCAFTAKKDPFVMAP-QFQGYPCNLPRVSGYLGS 550
++ ++ W + +++ NP KT FT K V AP + +G + P + YLG
Sbjct: 697 GLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSPVTAPIELEGVILDQPSQAKYLGI 756
Query: 551 TFRAMSSF 574
T +F
Sbjct: 757 TLDKRLTF 764
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/52 (30%), Positives = 31/52 (59%)
Frame = +2
Query: 23 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSD 178
+LD++KAFD + H ++ L +YG P+G ++ + +G ++ DG S+
Sbjct: 480 NLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSE 531
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSDTMTINA 196
A+ LD+A+AFDRVW LL K+ +P+ K + S+L R + D S I A
Sbjct: 576 AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEA 634
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 201 VPQGSVLSPTLFILYIND 254
VPQGSVL P L+ LY D
Sbjct: 636 VPQGSVLGPILYTLYTAD 653
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSDTMTINA 196
AV LD+++AFD+VW L+ K+ +PE K + S+L R V + S TI A
Sbjct: 578 AVFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEA 636
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 201 VPQGSVLSPTLFILYIND 254
VPQGSVL PTL+++Y D
Sbjct: 638 VPQGSVLGPTLYLIYTAD 655
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 36.3 bits (80), Expect = 0.030
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSDTMTI 190
V+LD ++AFDRV +++ +L + + K+I +F+ R +TV V S + +
Sbjct: 573 VTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPL 629
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 35.1 bits (77), Expect = 0.069
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSDTMTINA 196
A+ LD+A+AFDRVW LL K+ +P+ K + S+L + D S I A
Sbjct: 576 AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEA 634
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 201 VPQGSVLSPTLFILYIND 254
VPQGSVL P L+ LY D
Sbjct: 636 VPQGSVLGPILYTLYTAD 653
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +2
Query: 2 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVVDGDCSDT 181
K ++ D +AFDRV A+L +L +GI L I +F+ RS V ++ S++
Sbjct: 575 KNHVSILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNS 634
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 26 LDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTV 154
LDI +AFDRVWH L K+ +P + S+L+GR V
Sbjct: 583 LDIREAFDRVWHIGLQLKI-KQTLPAPYFGLLKSYLEGRRFAV 624
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 201 VPQGSVLSPTLFILYIND 254
VPQGSVL P L+ LY +D
Sbjct: 640 VPQGSVLGPLLYCLYSHD 657
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 32.3 bits (70), Expect = 0.48
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSVTVVV-DGDCSDTMTINA 196
++LD+ AF+ +L + + G+P+ + I ++ R + V DG S ++
Sbjct: 554 ITLDVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSHQVSAGV 613
Query: 197 DRSTRFGALPHAFHPVYQ*LLSID-----GIHCYADD 292
+ + G P ++ +Y +LSI +HC+ADD
Sbjct: 614 PQGSVLG--PILWNIMYDGILSISKPRGVELHCFADD 648
>BT021315-1|AAX33463.1| 808|Drosophila melanogaster RE10908p
protein.
Length = 808
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -2
Query: 253 SLIYRMKSVGESTEPCGTVSVNGHGIRAVTVYNDRDAPPIQKA 125
++I R+K + EPCG SV+ H + + Y D +A +QKA
Sbjct: 647 NVIVRLKEDHDGAEPCGN-SVSAHNLVLLAHYYDENA-YLQKA 687
>BT012431-1|AAS93702.1| 852|Drosophila melanogaster RH69719p
protein.
Length = 852
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KLVSEVENSXGRVSEWGELNLVQFNPIKTQVCAFTAK 472
+L + E + VSE GEL LVQF + V AF K
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK 50
>BT011466-1|AAR99124.1| 852|Drosophila melanogaster RE25460p
protein.
Length = 852
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KLVSEVENSXGRVSEWGELNLVQFNPIKTQVCAFTAK 472
+L + E + VSE GEL LVQF + V AF K
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK 50
>BT006026-1|AAO85560.1| 833|Drosophila melanogaster RE14149p
protein.
Length = 833
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KLVSEVENSXGRVSEWGELNLVQFNPIKTQVCAFTAK 472
+L + E + VSE GEL LVQF + V AF K
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK 50
>AY060693-1|AAL28241.1| 629|Drosophila melanogaster GH13403p
protein.
Length = 629
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -2
Query: 253 SLIYRMKSVGESTEPCGTVSVNGHGIRAVTVYNDRDAPPIQKA 125
++I R+K + EPCG SV+ H + + Y D +A +QKA
Sbjct: 468 NVIVRLKEDHDGAEPCGN-SVSAHNLVLLAHYYDENA-YLQKA 508
>AF132163-1|AAD34751.1| 855|Drosophila melanogaster unknown
protein.
Length = 855
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KLVSEVENSXGRVSEWGELNLVQFNPIKTQVCAFTAK 472
+L + E + VSE GEL LVQF + V AF K
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK 50
>AE014297-4333|AAN14159.1| 836|Drosophila melanogaster CG1709-PD,
isoform D protein.
Length = 836
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KLVSEVENSXGRVSEWGELNLVQFNPIKTQVCAFTAK 472
+L + E + VSE GEL LVQF + V AF K
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK 50
>AE014297-4332|AAN14158.1| 836|Drosophila melanogaster CG1709-PB,
isoform B protein.
Length = 836
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KLVSEVENSXGRVSEWGELNLVQFNPIKTQVCAFTAK 472
+L + E + VSE GEL LVQF + V AF K
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK 50
>AE014297-4331|AAN14157.1| 850|Drosophila melanogaster CG1709-PG,
isoform G protein.
Length = 850
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KLVSEVENSXGRVSEWGELNLVQFNPIKTQVCAFTAK 472
+L + E + VSE GEL LVQF + V AF K
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK 50
>AE014297-4330|AAN14156.1| 833|Drosophila melanogaster CG1709-PF,
isoform F protein.
Length = 833
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KLVSEVENSXGRVSEWGELNLVQFNPIKTQVCAFTAK 472
+L + E + VSE GEL LVQF + V AF K
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK 50
>AE014297-4329|AAN14155.1| 833|Drosophila melanogaster CG1709-PA,
isoform A protein.
Length = 833
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KLVSEVENSXGRVSEWGELNLVQFNPIKTQVCAFTAK 472
+L + E + VSE GEL LVQF + V AF K
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK 50
>AE014297-4328|AAN14154.1| 855|Drosophila melanogaster CG1709-PE,
isoform E protein.
Length = 855
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KLVSEVENSXGRVSEWGELNLVQFNPIKTQVCAFTAK 472
+L + E + VSE GEL LVQF + V AF K
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK 50
>AE014297-4327|AAF56861.1| 855|Drosophila melanogaster CG1709-PC,
isoform C protein.
Length = 855
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KLVSEVENSXGRVSEWGELNLVQFNPIKTQVCAFTAK 472
+L + E + VSE GEL LVQF + V AF K
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRK 50
>AE013599-1874|AAF58258.1| 808|Drosophila melanogaster CG8613-PA
protein.
Length = 808
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -2
Query: 253 SLIYRMKSVGESTEPCGTVSVNGHGIRAVTVYNDRDAPPIQKA 125
++I R+K + EPCG SV+ H + + Y D +A +QKA
Sbjct: 647 NVIVRLKEDHDGAEPCGN-SVSAHNLVLLAHYYDENA-YLQKA 687
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,137,637
Number of Sequences: 53049
Number of extensions: 657151
Number of successful extensions: 1757
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1757
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -