Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0112.Seq
         (663 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4382| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)               30   1.5  
SB_6680| Best HMM Match : Astacin (HMM E-Value=0)                      29   4.5  

>SB_4382| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
          Length = 492

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/56 (39%), Positives = 29/56 (51%)
 Frame = -1

Query: 390 TMRIRIRLYPSS*VIK*STCGRNILFRRILPTIV*PKK*TRRQYLLSIVLGQLIYC 223
           T+R R RL      I+ +  G NILF R+ PT   P K  R++ +L   L   IYC
Sbjct: 141 TLRGRARLAD----IRITARGENILFTRLSPTYTVPNK-PRKESILFTRLTTYIYC 191


>SB_6680| Best HMM Match : Astacin (HMM E-Value=0)
          Length = 637

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 354 SWMDTIVYGYASYTDTIIQSMKQLFHGLILKLWY 455
           S  + +V  Y+ Y D++ +  KQ+F G  L L+Y
Sbjct: 403 SMEEQVVGPYSLYDDSLFEGKKQIFAGRTLDLYY 436


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,221,990
Number of Sequences: 59808
Number of extensions: 294330
Number of successful extensions: 516
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)