Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0111.Seq
(581 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 115 2e-26
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 114 5e-26
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 95 2e-20
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 95 2e-20
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 95 3e-20
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 84 6e-17
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 79 2e-15
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 79 2e-15
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 56 2e-08
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 52 2e-07
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 52 3e-07
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 40 0.002
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 36 0.021
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 33 0.15
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 31 0.45
Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 3.2
Z82270-1|CAB63203.1| 914|Caenorhabditis elegans Hypothetical pr... 27 7.4
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 27 9.7
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 9.7
AL034489-4|CAA22466.1| 130|Caenorhabditis elegans Hypothetical ... 27 9.7
AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 115 bits (277), Expect = 2e-26
Identities = 88/198 (44%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNHMVNHFVPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLVIV 182
EVKSTAGDTHLGGEDFDN MVNHF + + +K + K L
Sbjct: 219 EVKSTAGDTHLGGEDFDNRMVNHFCAEFKRKHKKDLASNPRALRRLRTACERAKRTLSSS 278
Query: 183 HTSEH*DRFSL*GIDFYTSITRARRGAERRSVQVYHGAS---EKSLRDAKMDKAQIHDIV 353
+ GIDFYT+ITRAR E ++ EKSLRDAKMDK+Q+HDIV
Sbjct: 279 SQASIEIDSLFEGIDFYTNITRAR--FEELCADLFRSTMDPVEKSLRDAKMDKSQVHDIV 336
Query: 354 LVGGSTRIPKVQKLLK--ISLME-RSSTNLLTLTRP*LMVQLFRLLSCTVTILRSAGSAV 524
LVGGSTRIPKVQKLL S E S N VQ L ++ +
Sbjct: 337 LVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDL--LL 394
Query: 525 A*CNTLSLGIETAGSVMT 578
LSLGIETAG VMT
Sbjct: 395 LDVAPLSLGIETAGGVMT 412
Score = 107 bits (258), Expect = 4e-24
Identities = 57/74 (77%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Frame = +1
Query: 82 EFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGLT-STRQLLVLVE 258
EFKRK+KKDLA+N RALRRLRTACERAKRTLSSS+QASIEIDSLFEG+ T E
Sbjct: 245 EFKRKHKKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFE 304
Query: 259 ELNADLFRSTMEPV 300
EL ADLFRSTM+PV
Sbjct: 305 ELCADLFRSTMDPV 318
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +2
Query: 377 PQGAEAPEDFFNGKELNKSINPDEXXXXXXXXXXXILHGDNSE 505
P+ + D F+GKELNKSINPDE IL GD SE
Sbjct: 345 PKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSE 387
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 114 bits (274), Expect = 5e-26
Identities = 88/198 (44%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNHMVNHFVPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLVIV 182
EVKSTAGDTHLGGEDFDN MVNHF + + +K + E L
Sbjct: 219 EVKSTAGDTHLGGEDFDNRMVNHFCAEFKRKHKKDLASNPRALRRLRTACERANETLSSS 278
Query: 183 HTSEH*DRFSL*GIDFYTSITRARRGAERRSVQVYHGAS---EKSLRDAKMDKAQIHDIV 353
+ GIDFYT+ITRAR E ++ EKSLRDAKMDK+Q+HDIV
Sbjct: 279 CQASIEIDSLFEGIDFYTNITRAR--FEELCADLFRSTMDPVEKSLRDAKMDKSQVHDIV 336
Query: 354 LVGGSTRIPKVQKLLK--ISLME-RSSTNLLTLTRP*LMVQLFRLLSCTVTILRSAGSAV 524
LVGGSTRIPKVQKLL S E S N VQ L ++ +
Sbjct: 337 LVGGSTRIPKVQKLLSDLFSGKELNKSINPDEALAYGAAVQAAILSGDKSEAVQDL--LL 394
Query: 525 A*CNTLSLGIETAGSVMT 578
LSLGIETAG VMT
Sbjct: 395 LDVAPLSLGIETAGGVMT 412
Score = 103 bits (246), Expect = 1e-22
Identities = 55/74 (74%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = +1
Query: 82 EFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGLT-STRQLLVLVE 258
EFKRK+KKDLA+N RALRRLRTACERA TLSSS QASIEIDSLFEG+ T E
Sbjct: 245 EFKRKHKKDLASNPRALRRLRTACERANETLSSSCQASIEIDSLFEGIDFYTNITRARFE 304
Query: 259 ELNADLFRSTMEPV 300
EL ADLFRSTM+PV
Sbjct: 305 ELCADLFRSTMDPV 318
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +2
Query: 377 PQGAEAPEDFFNGKELNKSINPDEXXXXXXXXXXXILHGDNSE 505
P+ + D F+GKELNKSINPDE IL GD SE
Sbjct: 345 PKVQKLLSDLFSGKELNKSINPDEALAYGAAVQAAILSGDKSE 387
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 95.5 bits (227), Expect = 2e-20
Identities = 48/74 (64%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = +1
Query: 82 EFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGL-TSTRQLLVLVE 258
EFKRK KD++ N RA+RRLRTACERAKRTLSSS++A +E+DSLFEG+ T+ E
Sbjct: 245 EFKRKTGKDISPNPRAIRRLRTACERAKRTLSSSSEACVEVDSLFEGIDLCTKITRARFE 304
Query: 259 ELNADLFRSTMEPV 300
EL ADLFR T+EPV
Sbjct: 305 ELCADLFRKTLEPV 318
Score = 92.7 bits (220), Expect = 2e-19
Identities = 75/198 (37%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNHMVNHFVPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLVIV 182
EVKSTAGDTHLGGEDFD M+ HF+ + + K + K L
Sbjct: 219 EVKSTAGDTHLGGEDFDQRMLQHFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLSSS 278
Query: 183 HTSEH*DRFSL*GIDFYTSITRARRGAERRSVQVYHGASE---KSLRDAKMDKAQIHDIV 353
+ GID T ITRAR E ++ E K+LRDAK+DK++I ++V
Sbjct: 279 SEACVEVDSLFEGIDLCTKITRAR--FEELCADLFRKTLEPVEKALRDAKLDKSKIDEVV 336
Query: 354 LVGGSTRIPKVQKLLKISLMERS---STNLLTLTRP*LMVQLFRLLSCTVTILRSAGSAV 524
LVGGSTR+PK+QKLLK + S N VQ L ++ +
Sbjct: 337 LVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDV--LL 394
Query: 525 A*CNTLSLGIETAGSVMT 578
LSLGIETAG VMT
Sbjct: 395 VDVAPLSLGIETAGGVMT 412
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +2
Query: 398 EDFFNGKELNKSINPDEXXXXXXXXXXXILHGDNSE 505
+DFFNGKELN SINPDE +L G E
Sbjct: 352 KDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDE 387
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 95.5 bits (227), Expect = 2e-20
Identities = 48/74 (64%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = +1
Query: 82 EFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGL-TSTRQLLVLVE 258
EFKRK KD++ N RA+RRLRTACERAKRTLSSS++A +E+DSLFEG+ T+ E
Sbjct: 245 EFKRKTGKDISPNPRAIRRLRTACERAKRTLSSSSEACVEVDSLFEGIDLCTKITRARFE 304
Query: 259 ELNADLFRSTMEPV 300
EL ADLFR T+EPV
Sbjct: 305 ELCADLFRKTLEPV 318
Score = 92.7 bits (220), Expect = 2e-19
Identities = 75/198 (37%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNHMVNHFVPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLVIV 182
EVKSTAGDTHLGGEDFD M+ HF+ + + K + K L
Sbjct: 219 EVKSTAGDTHLGGEDFDQRMLQHFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLSSS 278
Query: 183 HTSEH*DRFSL*GIDFYTSITRARRGAERRSVQVYHGASE---KSLRDAKMDKAQIHDIV 353
+ GID T ITRAR E ++ E K+LRDAK+DK++I ++V
Sbjct: 279 SEACVEVDSLFEGIDLCTKITRAR--FEELCADLFRKTLEPVEKALRDAKLDKSKIDEVV 336
Query: 354 LVGGSTRIPKVQKLLKISLMERS---STNLLTLTRP*LMVQLFRLLSCTVTILRSAGSAV 524
LVGGSTR+PK+QKLLK + S N VQ L ++ +
Sbjct: 337 LVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDV--LL 394
Query: 525 A*CNTLSLGIETAGSVMT 578
LSLGIETAG VMT
Sbjct: 395 VDVAPLSLGIETAGGVMT 412
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +2
Query: 398 EDFFNGKELNKSINPDEXXXXXXXXXXXILHGDNSE 505
+DFFNGKELN SINPDE +L G E
Sbjct: 352 KDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDE 387
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 95.1 bits (226), Expect = 3e-20
Identities = 47/74 (63%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = +1
Query: 82 EFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGLTSTRQLL-VLVE 258
EFKRK KD+++N RA+RRLRTACERAKRTLSSST+A++E+DSLF+G ++ E
Sbjct: 245 EFKRKTGKDISSNPRAIRRLRTACERAKRTLSSSTEATVEVDSLFDGTDFYSKITRARFE 304
Query: 259 ELNADLFRSTMEPV 300
EL ADLFR T+EPV
Sbjct: 305 ELCADLFRKTLEPV 318
Score = 93.1 bits (221), Expect = 1e-19
Identities = 61/138 (44%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNHMVNHFVPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLV-- 176
EVKSTAGDTHLGGEDFD+ ++ HF+ + + K + K L
Sbjct: 219 EVKSTAGDTHLGGEDFDSRVLQHFMTEFKRKTGKDISSNPRAIRRLRTACERAKRTLSSS 278
Query: 177 IVHTSEH*DRFSL*GIDFYTSITRARRGAERRSVQVYHGASE---KSLRDAKMDKAQIHD 347
T E F G DFY+ ITRAR E ++ E K+LRDAK DK +I +
Sbjct: 279 TEATVEVDSLFD--GTDFYSKITRAR--FEELCADLFRKTLEPVEKALRDAKTDKGRIDE 334
Query: 348 IVLVGGSTRIPKVQKLLK 401
+VLVGGSTRIPK+QKLLK
Sbjct: 335 VVLVGGSTRIPKIQKLLK 352
Score = 33.9 bits (74), Expect = 0.085
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 398 EDFFNGKELNKSINPDEXXXXXXXXXXXILHG 493
++FFNGK+LN SINPDE +L G
Sbjct: 352 KEFFNGKDLNCSINPDEAVAFGAAVQAAVLSG 383
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 84.2 bits (199), Expect = 6e-17
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNHMVNHFVPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLVIV 182
EV +T GDTHLGGEDFD ++ +F+ +++ K R + + + K L
Sbjct: 245 EVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGKDLRKDNRAVQKLRREVEKAKRALSTQ 304
Query: 183 HTSEH*DRFSL*GIDFYTSITRARRGAERRSVQVYHGAS---EKSLRDAKMDKAQIHDIV 353
H ++ G DF ++TRA+ E ++ ++ +K L DA M K +H+IV
Sbjct: 305 HQTKIEIESLFDGEDFSETLTRAK--FEELNMDLFRATLKPVQKVLEDADMKKTDVHEIV 362
Query: 354 LVGGSTRIPKVQKLLKISLMERSSTNLLTLTRP*LMVQLFRLLSCTVTILRSAGSAV-A* 530
LVGGSTRIPKVQ+L+K + + + + + + + + + G V
Sbjct: 363 LVGGSTRIPKVQQLIKDYFNGKEPSRGINPDE--AVAYGAAVQAGVIGGVENTGDVVLLD 420
Query: 531 CNTLSLGIETAGSVMT 578
N L+LGIET G VMT
Sbjct: 421 VNPLTLGIETVGGVMT 436
Score = 31.5 bits (68), Expect = 0.45
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 377 PQGAEAPEDFFNGKELNKSINPDE 448
P+ + +D+FNGKE ++ INPDE
Sbjct: 371 PKVQQLIKDYFNGKEPSRGINPDE 394
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 79.0 bits (186), Expect = 2e-15
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNHMVNHFVPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLVIV 182
EV +T GDTHLGGEDFD ++ +F+ +++ K R + + + + K L
Sbjct: 248 EVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQ 307
Query: 183 HTSEH*DRFSL*GIDFYTSITRARRGAERRSVQVYHGAS---EKSLRDAKMDKAQIHDIV 353
H ++ G DF ++TRA+ E ++ ++ +K L D+ + K +H+IV
Sbjct: 308 HQTKVEIESLFDGEDFSETLTRAK--FEELNMDLFRATLKPVQKVLEDSDLKKDDVHEIV 365
Query: 354 LVGGSTRIPKVQKLLKISLMERSSTNLLTLTRP*LMVQLFRLLSCTVTILRSAGSAV-A* 530
LVGGSTRIPKVQ+L+K + + + + + ++ G V
Sbjct: 366 LVGGSTRIPKVQQLIKEFFNGKEPSRGINPDE--AVAYGAAVQGGVISGEEDTGEIVLLD 423
Query: 531 CNTLSLGIETAGSVMT 578
N L++GIET G VMT
Sbjct: 424 VNPLTMGIETVGGVMT 439
Score = 69.7 bits (163), Expect = 1e-12
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +1
Query: 85 FKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGLTSTRQLL-VLVEE 261
+K+K KDL +KRA+++LR E+AKR LS+ Q +EI+SLF+G + L EE
Sbjct: 275 YKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEE 334
Query: 262 LNADLFRSTMEPVRSL 309
LN DLFR+T++PV+ +
Sbjct: 335 LNMDLFRATLKPVQKV 350
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 377 PQGAEAPEDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 496
P+ + ++FFNGKE ++ INPDE ++ G+
Sbjct: 374 PKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE 413
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 79.0 bits (186), Expect = 2e-15
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNHMVNHFVPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLVIV 182
EV +T GDTHLGGEDFD ++ +F+ +++ K R + + + + K L
Sbjct: 248 EVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQ 307
Query: 183 HTSEH*DRFSL*GIDFYTSITRARRGAERRSVQVYHGAS---EKSLRDAKMDKAQIHDIV 353
H ++ G DF ++TRA+ E ++ ++ +K L D+ + K +H+IV
Sbjct: 308 HQTKVEIESLFDGEDFSETLTRAK--FEELNMDLFRATLKPVQKVLEDSDLKKDDVHEIV 365
Query: 354 LVGGSTRIPKVQKLLKISLMERSSTNLLTLTRP*LMVQLFRLLSCTVTILRSAGSAV-A* 530
LVGGSTRIPKVQ+L+K + + + + + ++ G V
Sbjct: 366 LVGGSTRIPKVQQLIKEFFNGKEPSRGINPDE--AVAYGAAVQGGVISGEEDTGEIVLLD 423
Query: 531 CNTLSLGIETAGSVMT 578
N L++GIET G VMT
Sbjct: 424 VNPLTMGIETVGGVMT 439
Score = 69.7 bits (163), Expect = 1e-12
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +1
Query: 85 FKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGLTSTRQLL-VLVEE 261
+K+K KDL +KRA+++LR E+AKR LS+ Q +EI+SLF+G + L EE
Sbjct: 275 YKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEE 334
Query: 262 LNADLFRSTMEPVRSL 309
LN DLFR+T++PV+ +
Sbjct: 335 LNMDLFRATLKPVQKV 350
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 377 PQGAEAPEDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 496
P+ + ++FFNGKE ++ INPDE ++ G+
Sbjct: 374 PKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE 413
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 55.6 bits (128), Expect = 2e-08
Identities = 60/199 (30%), Positives = 89/199 (44%), Gaps = 7/199 (3%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNHMVNHFVPGVQEE----IQKGPRYQQESS*AF--AYCM*EGK 164
EVKST GDT LGGEDFD+ +V+H V ++E + K P+ Q A A C
Sbjct: 242 EVKSTNGDTFLGGEDFDHALVHHLVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSST 301
Query: 165 EDLVIVHTSEH*DRFSL*GIDFYTSITRAR-RGAERRSVQVYHGASEKSLRDAKMDKAQI 341
I D+ ++ +TRA+ ++ K+L DA++ +QI
Sbjct: 302 TQTDINLPYITMDQSGPKHLNL--KLTRAKFEQIVGDLIKRTIEPCRKALHDAEVKSSQI 359
Query: 342 HDIVLVGGSTRIPKVQKLLKISLMERSSTNLLTLTRP*LMVQLFRLLSCTVTILRSAGSA 521
D++LVGG +R+PKVQ ++ + S P V + + V
Sbjct: 360 ADVLLVGGMSRMPKVQATVQEIFGKVPS----KAVNPDEAVAMGAAIQGAVLAGDVTDVL 415
Query: 522 VA*CNTLSLGIETAGSVMT 578
+ LSLGIET G +MT
Sbjct: 416 LLDVTPLSLGIETLGGIMT 434
Score = 48.8 bits (111), Expect = 3e-06
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Frame = +1
Query: 73 LYQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGLTSTRQLLVL 252
L EFK++ DL + +A++RLR A E+AK LSS+TQ I + + + + L +
Sbjct: 265 LVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSSTTQTDINLPYITMDQSGPKHLNLK 324
Query: 253 V-----EELNADLFRSTMEPVRSL--SVMPRWIRLKSTILYWWVAPLVSPRCRSS*RFL* 411
+ E++ DL + T+EP R + ++ +L ++ + P+ +++ + +
Sbjct: 325 LTRAKFEQIVGDLIKRTIEPCRKALHDAEVKSSQIADVLLVGGMSRM--PKVQATVQEIF 382
Query: 412 WKGAQQIY*P*RGRSLWCSCSGCYLAR*QF*GVQDLLLLDVTP 540
K + P ++ + G LA V D+LLLDVTP
Sbjct: 383 GKVPSKAVNPDEAVAMGAAIQGAVLAG----DVTDVLLLDVTP 421
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 52.4 bits (120), Expect = 2e-07
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 7/199 (3%)
Frame = +3
Query: 3 EVKSTAGDTHLGGEDFDNHMVNHFVPGVQEE----IQKGPRYQQESS*AF--AYCM*EGK 164
EVKST GDT LGGEDFD+ +V+H V ++E + K P+ Q A A C
Sbjct: 242 EVKSTNGDTFLGGEDFDHALVHHLVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSST 301
Query: 165 EDLVIVHTSEH*DRFSL*GIDFYTSITRAR-RGAERRSVQVYHGASEKSLRDAKMDKAQI 341
I D+ ++ +TRA+ ++ L DA++ +QI
Sbjct: 302 TQTDINLPYITMDQSGPKHLNL--KLTRAKFEQIVGDLIKRTIEPCRNVLHDAEVKSSQI 359
Query: 342 HDIVLVGGSTRIPKVQKLLKISLMERSSTNLLTLTRP*LMVQLFRLLSCTVTILRSAGSA 521
D++LVGG +R+PKVQ ++ + S P V + + V
Sbjct: 360 ADVLLVGGMSRMPKVQATVQEIFGKVPS----KAVNPDEAVAMGAAIQGAVLAGDVTDVL 415
Query: 522 VA*CNTLSLGIETAGSVMT 578
+ LSLGIET G +MT
Sbjct: 416 LLDVTPLSLGIETLGGIMT 434
Score = 50.0 bits (114), Expect = 1e-06
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Frame = +1
Query: 73 LYQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGLTSTRQLLVL 252
L EFK++ DL + +A++RLR A E+AK LSS+TQ I + + + + L +
Sbjct: 265 LVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSSTTQTDINLPYITMDQSGPKHLNLK 324
Query: 253 V-----EELNADLFRSTMEPVRSL--SVMPRWIRLKSTILYWWVAPLVSPRCRSS*RFL* 411
+ E++ DL + T+EP R++ + ++ +L ++ + P+ +++ + +
Sbjct: 325 LTRAKFEQIVGDLIKRTIEPCRNVLHDAEVKSSQIADVLLVGGMSRM--PKVQATVQEIF 382
Query: 412 WKGAQQIY*P*RGRSLWCSCSGCYLAR*QF*GVQDLLLLDVTP 540
K + P ++ + G LA V D+LLLDVTP
Sbjct: 383 GKVPSKAVNPDEAVAMGAAIQGAVLAG----DVTDVLLLDVTP 421
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 52.0 bits (119), Expect = 3e-07
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Frame = +3
Query: 6 VKSTAGDTHLGGEDFDNHMVNHFVPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLVIVH 185
VK+ GDTHLGG+D DN ++ + EE + + + + + E I
Sbjct: 216 VKAKGGDTHLGGQDIDNIIMIKML----EEFKNRHGIDLKGNYRALKRIRKAAEVAKITL 271
Query: 186 TSEH*DRFSL*----GIDFYTSITRARRGAERRSV---QVYHGASEKSLRDAKMDKAQIH 344
++ R L GIDF I+R + ++ V H E+ +R+A + K+QI+
Sbjct: 272 SASSVARIELECLHLGIDFIMRISRTDFESWIENLLMATVIH--VERVIREANLKKSQIN 329
Query: 345 DIVLVGGSTRIPKVQKLLKISLMERSSTNLLTLTRP 452
+IVLVGGSTRIP ++ ++K S S+T + P
Sbjct: 330 EIVLVGGSTRIPILKNIIKQSF--ESNTRICESIHP 363
Score = 47.2 bits (107), Expect = 8e-06
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 73 LYQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGL 225
+ +EFK ++ DL N RAL+R+R A E AK TLS+S+ A IE++ L G+
Sbjct: 238 MLEEFKNRHGIDLKGNYRALKRIRKAAEVAKITLSASSVARIELECLHLGI 288
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 52.0 bits (119), Expect = 3e-07
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Frame = +3
Query: 6 VKSTAGDTHLGGEDFDNHMVNHFVPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLVIVH 185
VK+ GDTHLGG+D DN ++ + EE + + + + + E I
Sbjct: 216 VKAKGGDTHLGGQDIDNIIMIKML----EEFKNRHGIDLKGNYRALKRIRKAAEVAKITL 271
Query: 186 TSEH*DRFSL*----GIDFYTSITRARRGAERRSV---QVYHGASEKSLRDAKMDKAQIH 344
++ R L GIDF I+R + ++ V H E+ +R+A + K+QI+
Sbjct: 272 SASSVARIELECLHLGIDFIMRISRTDFESWIENLLMATVIH--VERVIREANLKKSQIN 329
Query: 345 DIVLVGGSTRIPKVQKLLKISLMERSSTNLLTLTRP 452
+IVLVGGSTRIP ++ ++K S S+T + P
Sbjct: 330 EIVLVGGSTRIPILKNIIKQSF--ESNTRICESIHP 363
Score = 47.2 bits (107), Expect = 8e-06
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 73 LYQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGL 225
+ +EFK ++ DL N RAL+R+R A E AK TLS+S+ A IE++ L G+
Sbjct: 238 MLEEFKNRHGIDLKGNYRALKRIRKAAEVAKITLSASSVARIELECLHLGI 288
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 41.9 bits (94), Expect = 3e-04
Identities = 32/130 (24%), Positives = 60/130 (46%)
Frame = +3
Query: 9 KSTAGDTHLGGEDFDNHMVNHFVPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDLVIVHT 188
++ AG+ LGG+DF++ + H + + E+ K +++ + +GK L V +
Sbjct: 254 QAMAGNNRLGGQDFNDRVQKHLISKIAEKFGKTIDNKEDIQ-QIRMEVEKGKIRLTNVPS 312
Query: 189 SEH*DRFSL*GIDFYTSITRARRGAERRSVQVYHGASEKSLRDAKMDKAQIHDIVLVGGS 368
+ G Y ++ +L DA +D A + +IVLVGGS
Sbjct: 313 TTISLNLKTVGKWNYELTRDEFETLNGDLLKAIELPITAALADANLDTADVDEIVLVGGS 372
Query: 369 TRIPKVQKLL 398
T++P V+K++
Sbjct: 373 TQVPAVRKIV 382
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 94 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE 219
K KD++TN RA+ +L ER K+ LS++ +++SLFE
Sbjct: 270 KTSKDISTNARAIGKLHKEAERVKQVLSANKDTYAQVESLFE 311
Score = 34.3 bits (75), Expect = 0.064
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 318 AKMDKAQIHDIVLVGGSTRIPKVQKLLKISLMERSSTNLL 437
A++ I +VL+G TR+PKV+++LK L ++ +N L
Sbjct: 346 AQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFL 385
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 94 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE 219
K KD++TN RA+ +L ER K+ LS++ +++SLFE
Sbjct: 286 KTSKDISTNARAIGKLHKEAERVKQVLSANKDTYAQVESLFE 327
Score = 34.3 bits (75), Expect = 0.064
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 318 AKMDKAQIHDIVLVGGSTRIPKVQKLLKISLMERSSTNLL 437
A++ I +VL+G TR+PKV+++LK L ++ +N L
Sbjct: 362 AQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFL 401
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 35.9 bits (79), Expect = 0.021
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 79 QEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS-TQASIEIDSLFEGLTSTRQL-LVL 252
+EFK KY D AT+ R RL CER K+ +S++ T + I+ E T ++
Sbjct: 248 KEFKTKYGIDAATSPRPWLRLLDECERVKKQMSANQTPIPLNIECFMEDKDVTGKMQRQE 307
Query: 253 VEELNADLF 279
E+L A +F
Sbjct: 308 FEDLAAPIF 316
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/22 (45%), Positives = 19/22 (86%)
Frame = +3
Query: 336 QIHDIVLVGGSTRIPKVQKLLK 401
+I +I +VGGS+RIP +++++K
Sbjct: 337 EIDEIEIVGGSSRIPMIREIVK 358
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +3
Query: 300 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLKISLMERSSTNLLTLTRP*LMVQLFR 476
E++LR A++ I VL+G TR+PKVQ++++ ++ + L M LF+
Sbjct: 353 EQALRMAQIPIDDIDQFVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDEAVAMGALFQ 411
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 31.5 bits (68), Expect = 0.45
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 377 PQGAEAPEDFFNGKELNKSINPDE 448
P+ + +D+FNGKE ++ INPDE
Sbjct: 2 PKVQQLIKDYFNGKEPSRGINPDE 25
>Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical
protein ZK938.3 protein.
Length = 660
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +1
Query: 37 EVRTLTITWSTTLYQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLF 216
E + L+I ++ + Q+ +RKY+ N R R A + +TQA+I I +
Sbjct: 248 ETQLLSIEYAVLIIQKLERKYQAISRRNYVRFVRERAAELHGLKVEIDATQAAIRIQART 307
Query: 217 EGLTSTRQLLVLVEELNADLFRSTME 294
G + R+L+ + E ++ T E
Sbjct: 308 RGYFA-RKLVREMREKELNILNMTPE 332
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 88 KRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGLTSTRQLL 246
K +Y K L N++ ++ + CE A++ E D F + + R+ L
Sbjct: 1637 KEEYNKQLKKNQQIIKEYQIECEEARQAKEDIAALLREADRKFRAVEAEREQL 1689
>Z82270-1|CAB63203.1| 914|Caenorhabditis elegans Hypothetical
protein F53H2.1 protein.
Length = 914
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 64 STTLYQEFKRKYKKDLATNKRALRRLRTACERAKR 168
+TT+ ++F RK+++ N+ LRR R ERA R
Sbjct: 674 NTTINRDFHRKFQEQTKRNQEELRRKRE--ERAAR 706
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 27.1 bits (57), Expect = 9.7
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +1
Query: 43 RTLTITWSTTLYQEFKRK----YKKDLATN-KRALRRLRTACERAKRTLSSSTQASIEID 207
R+ ++T+ST+ E+ Y +D+A + A R+ ER + L IEI
Sbjct: 700 RSDSMTFSTSHASEYTASTVADYARDIAVSASTAARKKAIPTERTSQKLKEVGADGIEIL 759
Query: 208 SLFEGL-TSTRQLLVLVEELNADLFRSTMEPVRSLSVMPRWIRL 336
SL+EG+ T LV+ L T+E + + +++ +
Sbjct: 760 SLWEGIETDLDATTQLVDLLRVKSSLQTIESSEEVERINQYLEM 803
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.1 bits (57), Expect = 9.7
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +1
Query: 43 RTLTITWSTTLYQEFKRK----YKKDLATN-KRALRRLRTACERAKRTLSSSTQASIEID 207
R+ ++T+ST+ E+ Y +D+A + A R+ ER + L IEI
Sbjct: 5546 RSDSMTFSTSHASEYTASTVADYARDIAVSASTAARKKAIPTERTSQKLKEVGADGIEIL 5605
Query: 208 SLFEGL-TSTRQLLVLVEELNADLFRSTMEPVRSLSVMPRWIRL 336
SL+EG+ T LV+ L T+E + + +++ +
Sbjct: 5606 SLWEGIETDLDATTQLVDLLRVKSSLQTIESSEEVERINQYLEM 5649
>AL034489-4|CAA22466.1| 130|Caenorhabditis elegans Hypothetical
protein Y7A5A.6 protein.
Length = 130
Score = 27.1 bits (57), Expect = 9.7
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 58 TWSTTLYQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGLTSTR 237
T S T+Y E R+ + + + ++++ A E K T + E+ ++GLTST
Sbjct: 3 TDSFTVYFETIRQIRNEA---ELLVKQIDEAMEYLKNTFADYNHWEAEMAKKYQGLTSTF 59
Query: 238 QLLVLVEELNADLFRSTM--EPVRSLSVMP 321
+V N + ST+ EP ++ V+P
Sbjct: 60 SSTEMVSRSNKRVSASTLVKEPWKAF-VLP 88
>AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical
protein W08F4.2 protein.
Length = 566
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 478 SLNSCTISYGLVRVNRFVELLSIKEI 401
SL S TIS+ + +NRF E KEI
Sbjct: 467 SLKSITISFPHININRFDECTLFKEI 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,997,315
Number of Sequences: 27780
Number of extensions: 286886
Number of successful extensions: 887
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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