Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0109.Seq
         (508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P05661 Cluster: Myosin heavy chain, muscle; n=90; Bilat...    45   9e-04
UniRef50_A4EB73 Cluster: Putative uncharacterized protein; n=1; ...    35   1.2  
UniRef50_Q5TXC1 Cluster: ENSANGP00000026652; n=1; Anopheles gamb...    35   1.2  
UniRef50_Q0IFM4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.1  
UniRef50_A5K8C5 Cluster: Plasma membrane Ca2+ ATPase, putative; ...    32   8.6  

>UniRef50_P05661 Cluster: Myosin heavy chain, muscle; n=90;
            Bilateria|Rep: Myosin heavy chain, muscle - Drosophila
            melanogaster (Fruit fly)
          Length = 1962

 Score = 45.2 bits (102), Expect = 9e-04
 Identities = 25/41 (60%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = +2

Query: 5    KGRAGSAARGVSPAPQRS--RPALADGFGTFPPRFDLATED 121
            KGRAGS  RG SPAP+ +  RP   DG   FPPRFDLA E+
Sbjct: 1922 KGRAGSVGRGASPAPRATSVRPQF-DGL-AFPPRFDLAPEN 1960


>UniRef50_A4EB73 Cluster: Putative uncharacterized protein; n=1;
           Collinsella aerofaciens ATCC 25986|Rep: Putative
           uncharacterized protein - Collinsella aerofaciens ATCC
           25986
          Length = 409

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 368 SASECVGCTCAREHRRDTPPTSAPHTRTCTPRT 466
           SAS C   TC+R  R  TPP +  H  T   RT
Sbjct: 331 SASTCTATTCSRTCRSTTPPAATRHPETSADRT 363


>UniRef50_Q5TXC1 Cluster: ENSANGP00000026652; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000026652 - Anopheles gambiae
           str. PEST
          Length = 1333

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 344 YYRGVCIESASECVGCTCAREHRRDTPPTSAPHTRTCTPR 463
           Y  G  ++S   C  C C R  R+ TP   AP  + CTPR
Sbjct: 226 YPDGEKMKSEDPCEVCYCIRGQRKCTPKKCAPTIKGCTPR 265


>UniRef50_Q0IFM4 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1131

 Score = 33.9 bits (74), Expect = 2.1
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +2

Query: 344 YYRGVCIESASECVGCTCAREHRRDTPPTSAPHTRTCTPR 463
           Y  G  I S   C  C C R  ++ TP   AP  + CTPR
Sbjct: 255 YPEGERIASQDPCQVCFCIRGDQKCTPKKCAPAIKGCTPR 294


>UniRef50_A5K8C5 Cluster: Plasma membrane Ca2+ ATPase, putative; n=3;
            Plasmodium|Rep: Plasma membrane Ca2+ ATPase, putative -
            Plasmodium vivax
          Length = 1663

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -2

Query: 279  SVYIFVWLKKKKNCIFSILQFFAHHQQLMYKKLRFQRKICTV 154
            S+Y FV LK   NCI + LQ F  +   +Y  L     +CT+
Sbjct: 1204 SLYDFVKLKNFSNCILTNLQLFIEYNITLYVCLVIFSTVCTL 1245


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,402,874
Number of Sequences: 1657284
Number of extensions: 9132181
Number of successful extensions: 32168
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32154
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)