Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0109.Seq
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.36 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   4.5  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    23   5.9  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    23   7.9  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 0.36
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 8   GRAGSAARGVSPA-PQRSRPALADGFGTFPP 97
           G + +A+  VS   P  SR A ADG G+ PP
Sbjct: 755 GSSSTASSSVSTGMPSPSRSAFADGIGSPPP 785


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 13/54 (24%), Positives = 20/54 (37%)
 Frame = +2

Query: 317  TLLIFIYIIYYRGVCIESASECVGCTCAREHRRDTPPTSAPHTRTCTPRTLHLT 478
            T+ +  +I+  R V   +   CV CT  R      P    P  R    R   ++
Sbjct: 1372 TMQLRFWIVGARNVAKRTVFNCVKCTRCRPKLIQQPMADLPEQRVRQARPFSIS 1425


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 431 RWGACLGGARARTCIRRTRSHSR 363
           R+   +GG+R    +RR R H R
Sbjct: 179 RYSQTIGGSRRAAGVRRNRLHLR 201


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 76  RLRHLPT*VRPGDRRFLNVPLQNIKTDCTD 165
           +LR   T V  GDRR + +P+    +D  D
Sbjct: 163 QLREEGTLVDQGDRRAIEIPMNFTASDRVD 192


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,030
Number of Sequences: 2352
Number of extensions: 9774
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)