Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0106.Seq
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 182 2e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 182 2e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 3e-32
SB_54| Best HMM Match : Actin (HMM E-Value=0) 105 3e-23
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 93 2e-19
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 91 9e-19
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 77 1e-14
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 55 4e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 5e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 50 2e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 43 2e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 31 0.81
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.1
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 30 1.4
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.4
SB_41434| Best HMM Match : Keratin_B2 (HMM E-Value=1.8) 30 1.4
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.4
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 2.5
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32) 29 3.3
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 29 4.3
SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0) 28 5.7
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 5.7
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026) 28 7.6
SB_23023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 28 7.6
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 7.6
SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 7.6
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 7.6
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVM 154
Score = 134 bits (323), Expect = 8e-32
Identities = 64/71 (90%), Positives = 66/71 (92%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 94.3 bits (224), Expect = 8e-20
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERG SF
Sbjct: 156 SGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSF 201
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 182 bits (443), Expect = 2e-46
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVM 153
Score = 134 bits (323), Expect = 8e-32
Identities = 64/69 (92%), Positives = 65/69 (94%)
Frame = +3
Query: 54 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQSK 233
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 234 TGILTLKTP 260
GILTLK P
Sbjct: 62 RGILTLKYP 70
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 155 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 200
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 182 bits (443), Expect = 2e-46
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVM 153
Score = 132 bits (319), Expect = 2e-31
Identities = 63/69 (91%), Positives = 65/69 (94%)
Frame = +3
Query: 54 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQSK 233
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 234 TGILTLKTP 260
GILTLK P
Sbjct: 62 RGILTLKYP 70
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 155 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 200
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVM 154
Score = 141 bits (341), Expect = 5e-34
Identities = 67/71 (94%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 182 bits (443), Expect = 2e-46
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVM 154
Score = 136 bits (330), Expect = 1e-32
Identities = 64/71 (90%), Positives = 66/71 (92%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/18 (83%), Positives = 16/18 (88%), Gaps = 2/18 (11%)
Frame = +1
Query: 511 SGDGVSHTVPIYE--GYA 558
SGDGVSHTVPIYE GY+
Sbjct: 156 SGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 135 bits (326), Expect = 3e-32
Identities = 64/69 (92%), Positives = 65/69 (94%)
Frame = +3
Query: 54 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQSK 233
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 234 TGILTLKTP 260
GILTLK P
Sbjct: 62 RGILTLKYP 70
Score = 94.3 bits (224), Expect = 8e-20
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERG SF
Sbjct: 118 SGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSF 163
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +2
Query: 392 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 508
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVM 116
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTF 319
PIEHGI+TNWDDMEKI TF
Sbjct: 70 PIEHGIVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 105 bits (252), Expect = 3e-23
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 299 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 478
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 479 ASGRTTGIV 505
ASGRTTG V
Sbjct: 2189 ASGRTTGTV 2197
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +1
Query: 514 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERG SF
Sbjct: 2201 GDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSF 2245
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +3
Query: 15 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQ 173
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGR RH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 101 bits (243), Expect = 4e-22
Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 433
P+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++MFE +
Sbjct: 73 PMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQ 132
Query: 434 SPAMYVAIQAVLSLYASGRTTGIVL 508
+Y+AIQAVL+LYA G TG+V+
Sbjct: 133 FEGVYIAIQAVLTLYAQGLLTGVVI 157
Score = 67.7 bits (158), Expect = 8e-12
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RG +F
Sbjct: 159 SGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAF 204
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 66 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR--LRHQGVMVGMGQKDSYVGYEAQSKTG 239
+ +V DNG+G K G+AG + P +FPS+VGR +R + + KD VG EA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 240 ILTLKTP 260
+L + P
Sbjct: 67 MLEVNYP 73
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERG SF
Sbjct: 34 SGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSF 79
Score = 60.9 bits (141), Expect = 9e-10
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +2
Query: 413 IMFETFNSPAMYVAIQAVLSLYASGRTTGIV 505
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVV 31
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 90.6 bits (215), Expect = 9e-19
Identities = 38/54 (70%), Positives = 49/54 (90%)
Frame = +2
Query: 347 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 508
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VL
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVL 179
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/46 (58%), Positives = 38/46 (82%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G F
Sbjct: 181 AGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCF 226
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/84 (38%), Positives = 56/84 (66%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PA ++ +VL+ +A+GR+ G+V+
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVI 86
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 633
SG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 88 SGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +3
Query: 72 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQ 173
LV+D GS M K GFAGDDAP+ VFP IVGR RHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Frame = +3
Query: 9 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVG 188
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG + +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 189 --MGQKD-SYVGYEAQSKTGILTLKTPSSTVSSPTGMT 293
+ KD G A +K+G++ L S ++ + +GMT
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHLNQLSLSLYA-SGMT 778
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/39 (51%), Positives = 31/39 (79%)
Frame = -1
Query: 170 VAKATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 54
+A++ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 636
SGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER
Sbjct: 68 SGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 364
PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 301 PIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 302 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 481
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 482 SGRTTGIV 505
+GIV
Sbjct: 572 YSAVSGIV 579
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 66 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRH 170
+ +++D GS KAGFA ++A + + S++G L H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 43 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 147
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 455 IQAVLSLYASGRTTGIVLTPEMVSPTPYPSTKVTLCPTPS 574
+ VLS++ G T L+P+ +PTP P K T PTPS
Sbjct: 203 VSIVLSMF-DGNMTIFGLSPD--APTPPPPVKTTAAPTPS 239
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 377 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLTPEMV 523
+ PK ++ ++F F P M +A++ + A+G TGI+ T V
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGIIFTERHV 222
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 389 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 505
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = -1
Query: 224 CLVTHVGVFLAHTDHHALVAKATHDGR---EDGAGRVVA--GETGLAHAGAIVDYKRSNI 60
C++ HVG + ++A H G+ G ++A G+ +AH G +
Sbjct: 65 CMIAHVGQCIIANGDQCVIAHGAHGGQCVVAHGGQCMIAHGGQCMIAHVGQCIIANGGQC 124
Query: 59 VVAHLELCV 33
V+AH C+
Sbjct: 125 VIAHGGQCI 133
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 43 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 147
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_41434| Best HMM Match : Keratin_B2 (HMM E-Value=1.8)
Length = 381
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +2
Query: 359 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLTPEMVSPTPY 538
L+T + P ++R + + T P+ + + ++ +S T+ +V T + P+ +
Sbjct: 274 LVTLCTIRPSSHRSSLVTLC--TIGPPSHRSTLVTLCTIRSSSHTSTLV-TLCTIRPSSH 330
Query: 539 PSTKVTLCPTPSS 577
ST VTLC P+S
Sbjct: 331 RSTLVTLCIMPTS 343
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNE 328
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 79 STMAPACARPVSPATTRPAPSSRPSWVAFATRA*WSVWARKTPTWVTRHRARQV 240
S P+ R TT+P P +PSWV + + W TW R Q+
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWV----KVKYGAWYLNPKTWKARPDQEQL 85
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 34 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 147
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 400
P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 134 PFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 82 TMAPACARPVS-PATTRPAPSSRPSWVAFATRA*WSVWARKTPTWVTRHRARQVS-SL*R 255
T P P++ P+ RPAP W +AT WS+ + ++ ++ VS + R
Sbjct: 184 TSLPYTESPIAHPSLIRPAPIGIEIWYRYATWFLWSLRGYPVVSLASQPASQSVSRATPR 243
Query: 256 PHRA 267
PH A
Sbjct: 244 PHSA 247
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 175 PWWRRRPTMDGKTARGASSPAKPALHMPEP 86
P W ++ G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32)
Length = 355
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +2
Query: 314 TFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 490
T N + P H L+T + P ++R + + T P+ + + ++ S
Sbjct: 153 TLVNLCTITPPSHRSTLVTLCIITPPSHRSTLVTLC--TIRPPSHRSTLVTLCTIRPSSH 210
Query: 491 TTGIVLTPEMVSPTPYPSTKVTLCP-TPSS 577
+ +V T +V+P+ + ST VTLC PSS
Sbjct: 211 RSTLV-TLCIVTPSSHRSTLVTLCTIRPSS 239
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 169 WRRRPTMDGKTARGASSPAKPALHMPEP 86
W ++ G T R PAKPAL++P P
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSP 99
>SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0)
Length = 1086
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 549 FVDGYGVGDTISGVSTIPVVRPEAYSESTAWIATYMAGE 433
F+ + D + + TIP + E SE W+ T + GE
Sbjct: 779 FIVNLSIADLLMALFTIPRLLSEIVSEQGMWLVTGLLGE 817
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 169 WRRRPTMDGKTARGASSPAKPALHMPEP 86
W ++ G T R PAKPAL++P P
Sbjct: 72 WLQQLKDGGNTNRRTRIPAKPALNLPSP 99
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 28 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 153
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 43 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 147
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026)
Length = 197
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 522 TISGVSTIPVVRPEAYSESTAWIATYMAGELKVSNMIWVIFSLL 391
T+ + VV + Y + +ATY+ L VSN++ V+ +L
Sbjct: 20 TLGNAVVVVVVYKDPYKQLKKNLATYLIAGLAVSNLLLVVGEIL 63
>SB_23023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 144 PSIVGRLRHQGVMVGMGQKDSYVGYEAQSKTGILTLKTPSSTVSSPTGMTWRRSGTTPS 320
P ++ GV V G K++ + + + + L KTPS+ ++P + + TPS
Sbjct: 326 PELIAAAHKAGVRVIRGLKNARLLHHSNGTSPALCPKTPSTNRTTPDETSLHSTTATPS 384
>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
Length = 284
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 251 EDPIEHGIITNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLN 382
E +E G W+D+ + HTF +L + A E +P L+E PLN
Sbjct: 45 EVKLEKGKNQAWEDLRSVNAHTFDVKLFKEADESYP--LSEKPLN 87
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 43 SRCATTMLLR-L*STMAPACARPVSPAT 123
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = -2
Query: 526 RHHLRSEHDTGGTT---GGVQREHGLDCDVHGGGVEGLKHDLGHLLPVGLGVE-GGFGEQ 359
R H + D GGT GG +R+HG HGG G H G G + GG G
Sbjct: 4 RDHGSTRRDHGGTGRDHGGTRRDHGGTRRDHGG--TGRDHGGTGRDHGGTGRDHGGTGRD 61
Query: 358 HG 353
HG
Sbjct: 62 HG 63
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 43 SRCATTMLLR-L*STMAPACARPVSPAT 123
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 43 SRCATTMLLR-L*STMAPACARPVSPAT 123
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,844,767
Number of Sequences: 59808
Number of extensions: 499242
Number of successful extensions: 1874
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1869
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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