Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0106.Seq
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 182 3e-46
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 182 3e-46
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 181 3e-46
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 181 3e-46
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 181 3e-46
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 181 3e-46
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 181 3e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 181 3e-46
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 181 3e-46
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 181 3e-46
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 177 4e-45
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 141 4e-34
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 141 4e-34
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 139 1e-33
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 139 1e-33
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 131 4e-31
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 105 3e-23
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 94 9e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 85 4e-17
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.014
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.014
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.54
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 30 1.2
U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g ... 30 1.6
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 29 2.2
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 29 2.2
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 29 2.2
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 29 2.2
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 29 2.2
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 29 2.2
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 29 2.2
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 29 3.8
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 29 3.8
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 29 3.8
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 28 5.0
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 28 6.6
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 27 8.7
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 182 bits (442), Expect = 3e-46
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVL 154
Score = 141 bits (341), Expect = 4e-34
Identities = 67/71 (94%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 182 bits (442), Expect = 3e-46
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVL 154
Score = 139 bits (337), Expect = 1e-33
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVL 154
Score = 139 bits (337), Expect = 1e-33
Identities = 66/71 (92%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVL 154
Score = 139 bits (337), Expect = 1e-33
Identities = 66/71 (92%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVL 154
Score = 139 bits (337), Expect = 1e-33
Identities = 66/71 (92%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 181 bits (441), Expect = 3e-46
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVL 154
Score = 139 bits (337), Expect = 1e-33
Identities = 66/71 (92%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVL 154
Score = 139 bits (337), Expect = 1e-33
Identities = 66/71 (92%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 181 bits (441), Expect = 3e-46
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 27 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 86
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 87 PAMYVAIQAVLSLYASGRTTGVVL 110
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 112 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 157
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3
Query: 180 MVGMGQKDSYVGYEAQSKTGILTLKTP 260
MVGMGQKDSYVG EAQSK GILTLK P
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYP 27
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 181 bits (441), Expect = 3e-46
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 57 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVL 140
Score = 100 bits (240), Expect = 8e-22
Identities = 48/53 (90%), Positives = 49/53 (92%)
Frame = +3
Query: 102 KAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQSKTGILTLKTP 260
+AGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQSK GILTLK P
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 57
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 142 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 187
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 181 bits (441), Expect = 3e-46
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVL 154
Score = 139 bits (337), Expect = 1e-33
Identities = 66/71 (92%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG SF
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 177 bits (432), Expect = 4e-45
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFN+
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNT 129
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL 508
PAMYV IQAVLSLYASGRTTGIVL
Sbjct: 130 PAMYVNIQAVLSLYASGRTTGIVL 153
Score = 130 bits (314), Expect = 8e-31
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = +3
Query: 54 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQSK 233
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 234 TGILTLKTP 260
GILTLK P
Sbjct: 62 RGILTLKYP 70
Score = 89.4 bits (212), Expect = 2e-18
Identities = 40/46 (86%), Positives = 44/46 (95%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERG +F
Sbjct: 155 TGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTF 200
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 141 bits (341), Expect = 4e-34
Identities = 67/71 (94%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKI 304
PIEHGI+TNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 141 bits (341), Expect = 4e-34
Identities = 67/71 (94%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 34.7 bits (76), Expect = 0.058
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDM 295
PIEHGI+TNWDDM
Sbjct: 71 PIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 139 bits (337), Expect = 1e-33
Identities = 66/71 (92%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKI 304
PIEHGI+TNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 139 bits (337), Expect = 1e-33
Identities = 66/71 (92%), Positives = 67/71 (94%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEAQ 227
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR RHQGVMVGMGQKDSYVG EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 228 SKTGILTLKTP 260
SK GILTLK P
Sbjct: 61 SKRGILTLKYP 71
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKI 304
PIEHGI+TNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 131 bits (317), Expect = 4e-31
Identities = 57/87 (65%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 EDPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 427
E P+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 428 FNSPAMYVAIQAVLSLYASGRTTGIVL 508
FN PA+Y+ +QAVLSLYA+GRTTG+VL
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVL 157
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L G F
Sbjct: 159 SGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEF 204
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Frame = +3
Query: 54 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRLRHQGVMVGMGQKDSYVGYEA 224
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGR ++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 225 QSKTGILTLKTP 260
+S G+ +++ P
Sbjct: 62 ESNRGLFSIEYP 73
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 105 bits (252), Expect = 3e-23
Identities = 47/85 (55%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 433
P+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE +
Sbjct: 73 PMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYG 132
Query: 434 SPAMYVAIQAVLSLYASGRTTGIVL 508
++YVA+QAVL+LYA G TG+V+
Sbjct: 133 FNSIYVAVQAVLTLYAQGLLTGVVV 157
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG*SF 648
SGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RG +F
Sbjct: 159 SGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNF 204
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 72 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR--LRHQGVMVGMGQKDSYVGYEAQSKTGIL 245
+VVDNG+G K G+AG + P +FPS+VGR +R + + KD VG E +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 246 TLKTP 260
+ P
Sbjct: 69 DINYP 73
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 93.9 bits (223), Expect = 9e-20
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PI HGI+ +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+FN
Sbjct: 84 PIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNV 143
Query: 437 PAMYVAIQAVLSLYAS 484
P +Y+A+QAVL+L AS
Sbjct: 144 PGLYIAVQAVLALTAS 159
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1
Query: 511 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 636
SGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R
Sbjct: 177 SGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDR 218
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 48 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 155
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/86 (45%), Positives = 57/86 (66%)
Frame = +2
Query: 251 EDPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 430
E ++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F
Sbjct: 91 ESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKF 150
Query: 431 NSPAMYVAIQAVLSLYASGRTTGIVL 508
PA Y++ VLS +A GRT G+++
Sbjct: 151 QVPAYYLSKNVVLSCFAQGRTHGLMV 176
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +1
Query: 493 HRYRAHSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 636
H SG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 172 HGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 57 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 155
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 430
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 430
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +2
Query: 161 PSPPGRDGRYGPERLLRGLRGTEQDRYPHSEDPI 262
P PPG G+ GP R LRGL G P S DP+
Sbjct: 385 PGPPGFPGQDGP-RGLRGLNGGYSGVQPSSYDPV 417
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 79 STMAPACARPVSPATTRPAPSSRP 150
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 326 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 505
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 506 L 508
+
Sbjct: 326 V 326
>U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g
protein signalingprotein 6 protein.
Length = 737
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +3
Query: 96 MCKAGFAGDDAPRAV-FPSIVG-RLRHQGVMVGMGQKDSYVGYEAQSKTGILTLKTPSST 269
M K+G G P+ + P+I ++ + G S A S + + KT +S
Sbjct: 617 MGKSGDDGSQEPQGIRHPAIFSTKIGDEAAAAAAGASPST---SAPSTSTSVQTKTTTSP 673
Query: 270 VSSPTGMTWRRSGTTPSTMSCV 335
SPT T SGTT S S V
Sbjct: 674 TKSPTSTTITTSGTTTSATSSV 695
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 161 PSPPGRDGRYGPERLLRGLRGTEQDRYPHSEDPIEHGIITNWDDMEKI 304
P PGRDG G E G RG + P +D + +T+ DD+E+I
Sbjct: 786 PGAPGRDGTSGVE----GQRGPQGPPGPKGDDGVSMESLTD-DDIERI 828
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 161 PSPPGRDGRYGPERLLRGLRGTEQDRYPHSEDPIEHGIITNWDDMEKI 304
P PGRDG G E G RG + P +D + +T+ DD+E+I
Sbjct: 389 PGAPGRDGTSGVE----GQRGPQGPPGPKGDDGVSMESLTD-DDIERI 431
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 161 PSPPGRDGRYGPERLLRGLRGTEQDRYPHSEDPIEHGIITNWDDMEKI 304
P PGRDG G E G RG + P +D + +T+ DD+E+I
Sbjct: 749 PGAPGRDGTSGVE----GQRGPQGPPGPKGDDGVSMESLTD-DDIERI 791
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 161 PSPPGRDGRYGPERLLRGLRGTEQDRYPHSEDPIEHGIITNWDDMEKI 304
P PGRDG G E G RG + P +D + +T+ DD+E+I
Sbjct: 261 PGAPGRDGTSGVE----GQRGPQGPPGPKGDDGVSMESLTD-DDIERI 303
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 161 PSPPGRDGRYGPERLLRGLRGTEQDRYPHSEDPIEHGIITNWDDMEKI 304
P PGRDG G E G RG + P +D + +T+ DD+E+I
Sbjct: 786 PGAPGRDGTSGVE----GQRGPQGPPGPKGDDGVSMESLTD-DDIERI 828
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 161 PSPPGRDGRYGPERLLRGLRGTEQDRYPHSEDPIEHGIITNWDDMEKI 304
P PGRDG G E G RG + P +D + +T+ DD+E+I
Sbjct: 389 PGAPGRDGTSGVE----GQRGPQGPPGPKGDDGVSMESLTD-DDIERI 431
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 161 PSPPGRDGRYGPERLLRGLRGTEQDRYPHSEDPIEHGIITNWDDMEKI 304
P PGRDG G E G RG + P +D + +T+ DD+E+I
Sbjct: 749 PGAPGRDGTSGVE----GQRGPQGPPGPKGDDGVSMESLTD-DDIERI 791
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 161 PSPPGRDGRYGPERLLRGLRGTEQDRYPHSEDPIEHGIITNWDDMEKI 304
P PGRDG G E G RG + P +D + +T+ DD+E+I
Sbjct: 261 PGAPGRDGTSGVE----GQRGPQGPPGPKGDDGVSMESLTD-DDIERI 303
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 161 PSPPGRDGRYGPERLLRGLRGTEQDRYPHSEDPIEHGIITNWDDMEKI 304
P PGRDG G E G RG + P +D + +T+ DD+E+I
Sbjct: 389 PGAPGRDGTSGVE----GQRGPQGPPGPKGDDGVSMESLTD-DDIERI 431
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 161 PSPPGRDGRYGPERLLRGLRGTEQDRYPHSEDPIEHGIITNWDDMEKI 304
P PGRDG G E G RG + P +D + +T+ DD+E+I
Sbjct: 728 PGAPGRDGTSGVE----GQRGPQGPPGPKGDDGVSMESLTD-DDIERI 770
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 70 RL*STMAPACARPVSPATTRPAPSSRPSWVAFATRA 177
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical protein
T01H8.5d protein.
Length = 1931
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 248 SEDTCLALCLVTHVGVFLAHTDHHALVAKATHDG 147
S +TCLAL ++ + FLAH L+A H G
Sbjct: 947 SNETCLALAVIVNNKHFLAHPCCQILLADLWHGG 980
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 248 SEDTCLALCLVTHVGVFLAHTDHHALVAKATHDG 147
S +TCLAL ++ + FLAH L+A H G
Sbjct: 987 SNETCLALAVIVNNKHFLAHPCCQILLADLWHGG 1020
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 248 SEDTCLALCLVTHVGVFLAHTDHHALVAKATHDG 147
S +TCLAL ++ + FLAH L+A H G
Sbjct: 1048 SNETCLALAVIVNNKHFLAHPCCQILLADLWHGG 1081
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 248 SEDTCLALCLVTHVGVFLAHTDHHALVAKATHDG 147
S +TCLAL ++ + FLAH L+A H G
Sbjct: 947 SNETCLALAVIVNNKHFLAHPCCQILLADLWHGG 980
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical protein
T01H8.5c protein.
Length = 1971
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 248 SEDTCLALCLVTHVGVFLAHTDHHALVAKATHDG 147
S +TCLAL ++ + FLAH L+A H G
Sbjct: 987 SNETCLALAVIVNNKHFLAHPCCQILLADLWHGG 1020
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5a protein.
Length = 2032
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 248 SEDTCLALCLVTHVGVFLAHTDHHALVAKATHDG 147
S +TCLAL ++ + FLAH L+A H G
Sbjct: 1048 SNETCLALAVIVNNKHFLAHPCCQILLADLWHGG 1081
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 248 SEDTCLALCLVTHVGVFLAHTDHHALVAKATHDG 147
S +TCLAL ++ + FLAH L+A H G
Sbjct: 987 SNETCLALAVIVNNKHFLAHPCCQILLADLWHGG 1020
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +2
Query: 161 PSPPGRDGRYGP--ERLLRGLRG 223
P PPGRDGR G E+ +GLRG
Sbjct: 335 PGPPGRDGRPGDKGEKGEQGLRG 357
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 431 NSPAMYVAIQAVLSLYASGRTTGIVLTPEMVSPTPYPSTKVTLCPTPSSVWTW 589
N+ ++ V + A S+Y+S + I L + CP PSS+W+W
Sbjct: 821 NAGSIPVELWAEKSIYSSFWDSVICLNKDKKKLMEAMEHTKGKCPIPSSIWSW 873
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 404 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLTPEMVSPTPYPSTKVTLCPTP 571
+ Q+M F A A S + T + +PTPYPS++ T+ PTP
Sbjct: 127 LLQVMAMVFQEKCPVFARSAANSATNASATNPSAGSSASSTPTPYPSSQPTM-PTP 181
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 102 KAGFAGDDAPRAVFPSIVGRLRHQG 176
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 79 STMAPACARPVSPATTRPAPSSRPSWVAFATRA 177
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,390,899
Number of Sequences: 27780
Number of extensions: 350366
Number of successful extensions: 1619
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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