Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0104.Seq
         (432 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    26   0.66 
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    24   2.0  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    22   8.1  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    22   8.1  
AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    22   8.1  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    22   8.1  

>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 25.8 bits (54), Expect = 0.66
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 249 TQLSEDAGAHFGARFLGQCDDRDAKGRHG 163
           T+LS+DAGA  GA   G   + DA    G
Sbjct: 58  TELSDDAGAEEGAEDAGSDAEADAGAADG 86


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +3

Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYS 353
           G P +  A+    ++   S P++  ++V++KYS
Sbjct: 405 GRPKMLHAIKRGASVIKASIPKIKDVNVIDKYS 437


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 332 DDGELRVGHGAQGDGERHGAPH 267
           D G L +G+G   +G  HG  H
Sbjct: 541 DSGTLPLGNGTTVNGTAHGRFH 562


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 2/18 (11%)
 Frame = -2

Query: 314 VGHGAQGDGE--RHGAPH 267
           +GHG  G+GE   HG  H
Sbjct: 212 LGHGRVGEGEGGEHGGEH 229


>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 166 VATLGVAVIALAEETGAEMCTRIFG 240
           +ATL V ++ LA    A+  + IFG
Sbjct: 6   IATLTVLLVLLAGTASAKKASTIFG 30


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 312 NPQLSVIDVLNKYSHDSDNDVA 377
           N QLS +D+L K   ++DN ++
Sbjct: 44  NSQLSKVDLLLKLEGETDNGLS 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,140
Number of Sequences: 2352
Number of extensions: 4097
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)