Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0102.Seq
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    29   0.032
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    24   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   2.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.4  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 29.5 bits (63), Expect = 0.032
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 648 SSNAFRFEGRGSRCNYTETLELISQGGWRICRCLWAPVTLNT 773
           + N+ ++ G      Y E +EL  +GGW++   +W     NT
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV---VWDDTQKNT 322


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 456 LIDF*G*IMTLSVFFFVIMKTFV 524
           L+DF   I ++SVF F  M +FV
Sbjct: 204 LVDFKSVIRSISVFSFFFMPSFV 226


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 691 TILRP*NLYLKVGGAFVDVYGL 756
           T++ P  ++L + GAFV  +GL
Sbjct: 893 TVIGPGTIFLMLVGAFVAAFGL 914


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 691 TILRP*NLYLKVGGAFVDVYGL 756
           T++ P  ++L + GAFV  +GL
Sbjct: 893 TVIGPGTIFLMLVGAFVAAFGL 914


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 371 FCFRKSVYKVF 403
           +CF  SVYKVF
Sbjct: 182 YCFNSSVYKVF 192


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 654 NAFRFEGRGSRCNYTETLELISQGGW 731
           +A R+ G      Y E +E  + GGW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 344 LIKHVIKAFFCFRKSVYK 397
           ++ H+   F  FR+ +YK
Sbjct: 284 IVDHISNQFVAFRRKIYK 301


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 98  LFAVVTNIFVLSAVYIKKN 42
           LFA+ TN+ +L+ V I K+
Sbjct: 83  LFAIYTNLSILTTVTIFKS 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,591
Number of Sequences: 336
Number of extensions: 3227
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)