Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0102.Seq
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    32   0.78 

>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1830

 Score = 32.3 bits (70), Expect = 0.78
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -3

Query: 778 HLVLSVTGAHRHLQMRHPP*--DISSKVSV*LQRLPRPSNRNA 656
           H   +  G H  L  R PP   + SS  S   Q+LPRPS+RNA
Sbjct: 481 HSCFTCKGRHHTLLHRSPPNSENASSSTSPPTQQLPRPSSRNA 523


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,499,878
Number of Sequences: 53049
Number of extensions: 564907
Number of successful extensions: 1150
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)