Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0101.Seq
         (592 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051984-1|AAK93408.1|  838|Drosophila melanogaster LD45365p pro...    30   2.0  
AF220364-1|AAF37265.1|  838|Drosophila melanogaster Plenty of SH...    30   2.0  
AE013599-2508|AAF57833.1|  838|Drosophila melanogaster CG4909-PA...    30   2.0  
AF145629-1|AAD38604.1|  985|Drosophila melanogaster BcDNA.GH0558...    29   6.2  
AE013599-714|AAM68837.1|  985|Drosophila melanogaster CG8740-PC,...    29   6.2  
AE013599-713|AAM68836.1|  985|Drosophila melanogaster CG8740-PB,...    29   6.2  
AE013599-712|AAF59045.1|  985|Drosophila melanogaster CG8740-PA,...    29   6.2  
AJ243904-1|CAB64937.1|  773|Drosophila melanogaster SF1 protein ...    28   8.2  
AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA...    28   8.2  

>AY051984-1|AAK93408.1|  838|Drosophila melanogaster LD45365p
           protein.
          Length = 838

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/58 (24%), Positives = 33/58 (56%)
 Frame = +1

Query: 196 KSARAGEGAQKEDQRSRKRDKGKPEPKPAKGVTVPTRKGIKXTQNVKSQDIKSGEQQK 369
           ++A AG+G +K ++   + ++ KP+P PA+ V  P  + ++   + +S      +Q++
Sbjct: 78  QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPPDNQLLQLQSHQQSHQPARHKQRR 134


>AF220364-1|AAF37265.1|  838|Drosophila melanogaster Plenty of SH3s
           protein.
          Length = 838

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/58 (24%), Positives = 33/58 (56%)
 Frame = +1

Query: 196 KSARAGEGAQKEDQRSRKRDKGKPEPKPAKGVTVPTRKGIKXTQNVKSQDIKSGEQQK 369
           ++A AG+G +K ++   + ++ KP+P PA+ V  P  + ++   + +S      +Q++
Sbjct: 78  QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPPDNQLLQLQSHQQSHQPARHKQRR 134


>AE013599-2508|AAF57833.1|  838|Drosophila melanogaster CG4909-PA
           protein.
          Length = 838

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/58 (24%), Positives = 33/58 (56%)
 Frame = +1

Query: 196 KSARAGEGAQKEDQRSRKRDKGKPEPKPAKGVTVPTRKGIKXTQNVKSQDIKSGEQQK 369
           ++A AG+G +K ++   + ++ KP+P PA+ V  P  + ++   + +S      +Q++
Sbjct: 78  QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPPDNQLLQLQSHQQSHQPARHKQRR 134


>AF145629-1|AAD38604.1|  985|Drosophila melanogaster BcDNA.GH05582
           protein.
          Length = 985

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 193 VKSARAGEGAQKEDQRSRKRDKGKPEPK 276
           + + R GEGA  E Q  R R+ G+P P+
Sbjct: 177 ILTRRFGEGATLERQADRNREVGRPTPE 204


>AE013599-714|AAM68837.1|  985|Drosophila melanogaster CG8740-PC,
           isoform C protein.
          Length = 985

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 193 VKSARAGEGAQKEDQRSRKRDKGKPEPK 276
           + + R GEGA  E Q  R R+ G+P P+
Sbjct: 177 ILTRRFGEGATLERQADRNREVGRPTPE 204


>AE013599-713|AAM68836.1|  985|Drosophila melanogaster CG8740-PB,
           isoform B protein.
          Length = 985

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 193 VKSARAGEGAQKEDQRSRKRDKGKPEPK 276
           + + R GEGA  E Q  R R+ G+P P+
Sbjct: 177 ILTRRFGEGATLERQADRNREVGRPTPE 204


>AE013599-712|AAF59045.1|  985|Drosophila melanogaster CG8740-PA,
           isoform A protein.
          Length = 985

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 193 VKSARAGEGAQKEDQRSRKRDKGKPEPK 276
           + + R GEGA  E Q  R R+ G+P P+
Sbjct: 177 ILTRRFGEGATLERQADRNREVGRPTPE 204


>AJ243904-1|CAB64937.1|  773|Drosophila melanogaster SF1 protein
           protein.
          Length = 773

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 199 SARAGEGAQKEDQRSRKRDKGKPEPK 276
           SA  G G   + +RSR RD+G+ + K
Sbjct: 26  SANGGSGRSADKERSRSRDRGRDKDK 51


>AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA
           protein.
          Length = 787

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 199 SARAGEGAQKEDQRSRKRDKGKPEPK 276
           SA  G G   + +RSR RD+G+ + K
Sbjct: 26  SANGGSGRSADKERSRSRDRGRDKDK 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,197,491
Number of Sequences: 53049
Number of extensions: 398949
Number of successful extensions: 1280
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)