Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0100.Seq
         (362 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes ...    60   1e-08
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;...    39   0.031
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    34   0.67 
UniRef50_Q9ZVV9 Cluster: Putative uncharacterized protein At2g07...    33   1.2  
UniRef50_Q6Z8F1 Cluster: Putative uncharacterized protein P0459B...    33   1.6  
UniRef50_Q3CHS3 Cluster: Extracellular solute-binding protein, f...    32   3.6  

>UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes
           scapularis|Rep: Putative secreted protein - Ixodes
           scapularis (Black-legged tick) (Deer tick)
          Length = 65

 Score = 60.1 bits (139), Expect = 1e-08
 Identities = 29/53 (54%), Positives = 34/53 (64%)
 Frame = +1

Query: 55  PY*GDTANGSIYQFWFLRSYSVTWITVVILALIHALRTLTSDGMSAFIRSKPI 213
           P  G+TANGS+ Q WFLRS+  TWITV IL LIHA+         AFIR + I
Sbjct: 2   PKQGETANGSLNQLWFLRSFLPTWITVAILELIHAVSPKPLGATGAFIRPRSI 54


>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 508

 Score = 38.7 bits (86), Expect = 0.031
 Identities = 18/31 (58%), Positives = 20/31 (64%)
 Frame = +3

Query: 120 YLDNCGNSSANTCTQNSDQ*WDECFY*IKTN 212
           YLDNCGNS ANTC + +    D C Y  KTN
Sbjct: 468 YLDNCGNSRANTC-RRAPTSGDACIYQTKTN 497



 Score = 31.1 bits (67), Expect = 6.3
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +1

Query: 1   ASSYMLVSKIK-PCMSQCKPY*GDTANGSIYQFWFLRSYSVTWITVVILALIHALRTLTS 177
           ASS  L  ++   C+S    Y  +TANGS+ Q WFL S    ++     +  +  R   +
Sbjct: 427 ASSICLSQRLSHACLSTHGRY-SETANGSLNQLWFLWSLPSRYLDNCGNSRANTCRRAPT 485

Query: 178 DGMSAFIRSKPIDGGP 225
            G +   ++K   G P
Sbjct: 486 SGDACIYQTKTNPGSP 501


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 34.3 bits (75), Expect = 0.67
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 305 MSALSSFDGSFCDYHG 352
           MSALS+FDG+FC YHG
Sbjct: 1   MSALSTFDGTFCAYHG 16


>UniRef50_Q9ZVV9 Cluster: Putative uncharacterized protein
           At2g07020; n=1; Arabidopsis thaliana|Rep: Putative
           uncharacterized protein At2g07020 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 620

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 267 AKVSNSSKLTTSDARPSVDWF*SNKSTHPITGQSSE 160
           A VS+S     S  RPS+DWF  N+S +  +  SSE
Sbjct: 228 ALVSDSDLSFVSSDRPSMDWFEDNRSNYATSSSSSE 263


>UniRef50_Q6Z8F1 Cluster: Putative uncharacterized protein
           P0459B01.16; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0459B01.16 - Oryza sativa subsp. japonica (Rice)
          Length = 172

 Score = 33.1 bits (72), Expect = 1.6
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 2   PVVICLYQRLSHACLS 49
           PVVICL QRLSHAC S
Sbjct: 155 PVVICLSQRLSHACAS 170


>UniRef50_Q3CHS3 Cluster: Extracellular solute-binding protein,
           family 1 precursor; n=2; Thermoanaerobacter
           ethanolicus|Rep: Extracellular solute-binding protein,
           family 1 precursor - Thermoanaerobacter ethanolicus ATCC
           33223
          Length = 433

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +3

Query: 72  REWLNISVLVP*ILLSYLDNCGNSSANTCTQNSDQ 176
           + +L++++++  ILL YL  CGNSS  T   N+++
Sbjct: 4   KRFLSMTIIILMILLLYLTGCGNSSTTTEKANAEK 38


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,375,612
Number of Sequences: 1657284
Number of extensions: 5871668
Number of successful extensions: 13252
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13252
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)