Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0100.Seq
         (362 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    26   0.50 
AY825679-1|AAV70242.1|  158|Anopheles gambiae olfactory receptor...    23   4.7  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    22   8.1  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    22   8.1  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +2

Query: 206 NQSTEGLASEVVNFDELDTFADRMVKYRRQIFQMSALSSFDGSFCDYHG 352
           NQS+E +    +   + ++   R+V Y R  F + +L+  D  F D  G
Sbjct: 31  NQSSEAVKLFPIFIFDGESAGTRIVGYNRMKFLLESLADLDRQFRDLGG 79


>AY825679-1|AAV70242.1|  158|Anopheles gambiae olfactory receptor
           GPRor70 protein.
          Length = 158

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +1

Query: 88  YQFWFLRSYSVTWITVVILAL-IHALRTLTSDG--MSAFIRSKP 210
           Y  WF   +  T  T+V+LA  ++ L     +G  MS F+   P
Sbjct: 34  YILWFFFRFVTTLATIVVLAFGLYPLFAYNVNGVVMSLFLYELP 77


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/38 (18%), Positives = 21/38 (55%)
 Frame = +3

Query: 12  YACIKD*AMHVSVQAVLRRYREWLNISVLVP*ILLSYL 125
           Y C  +  + ++    +RR   +  +++++P + +S+L
Sbjct: 223 YTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFL 260


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/38 (18%), Positives = 21/38 (55%)
 Frame = +3

Query: 12  YACIKD*AMHVSVQAVLRRYREWLNISVLVP*ILLSYL 125
           Y C  +  + ++    +RR   +  +++++P + +S+L
Sbjct: 223 YTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFL 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,191
Number of Sequences: 2352
Number of extensions: 6604
Number of successful extensions: 54
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)