Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0100.Seq
         (362 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3301|AAF53931.1|  761|Drosophila melanogaster CG9333-PA...    28   3.2  
AE014297-4775|AAF57176.1|  836|Drosophila melanogaster CG1804-PA...    27   7.4  
AY118568-1|AAM49937.2|  360|Drosophila melanogaster LD40776p pro...    27   9.7  
AE013599-3245|AAF46745.1|  346|Drosophila melanogaster CG9862-PA...    27   9.7  

>AE014134-3301|AAF53931.1|  761|Drosophila melanogaster CG9333-PA
           protein.
          Length = 761

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 300 KICRRYLTMRSAKVSNSSKLTTSDARPSVDW 208
           +IC++     S KV  SSK TT+     VDW
Sbjct: 6   RICKKNSIRNSEKVEESSKSTTNCPLSCVDW 36


>AE014297-4775|AAF57176.1|  836|Drosophila melanogaster CG1804-PA
           protein.
          Length = 836

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 210 NRRRASRPKSLILMNWILL-QIAWSSTGDRSFKC 308
           +RRR+  P++L +  WILL  +AW+   D S  C
Sbjct: 6   DRRRSRTPRTLPVC-WILLCLVAWTVADDWSLSC 38


>AY118568-1|AAM49937.2|  360|Drosophila melanogaster LD40776p
           protein.
          Length = 360

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +3

Query: 180 WDECFY*IKTNRRRASRPKSLILMNWILLQIAWSSTGDRSF 302
           WD      +  +  A+ PKS+  M   +L + WS  G + F
Sbjct: 58  WDSTVRCWEVEQNGATVPKSMKTMGGPVLDVCWSDDGSKVF 98


>AE013599-3245|AAF46745.1|  346|Drosophila melanogaster CG9862-PA
           protein.
          Length = 346

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +3

Query: 180 WDECFY*IKTNRRRASRPKSLILMNWILLQIAWSSTGDRSF 302
           WD      +  +  A+ PKS+  M   +L + WS  G + F
Sbjct: 44  WDSTVRCWEVEQNGATVPKSMKTMGGPVLDVCWSDDGSKVF 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,647,312
Number of Sequences: 53049
Number of extensions: 271338
Number of successful extensions: 754
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)