Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0099.Seq
         (715 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous po...    31   1.2  
AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA...    31   1.2  

>U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous
            polyposis coli protein.
          Length = 2416

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = +2

Query: 530  KNCTRIRPMRSRMMTHTWTEKSLMKGRRSLKMLRRARPTPPP 655
            +N     P + + ++ T  ++SL+ G   +++  + +PTPPP
Sbjct: 2176 RNSNNAAPSKKKTLSPTIAKRSLVPGGSGVRLPAKKKPTPPP 2217


>AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA
            protein.
          Length = 2417

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = +2

Query: 530  KNCTRIRPMRSRMMTHTWTEKSLMKGRRSLKMLRRARPTPPP 655
            +N     P + + ++ T  ++SL+ G   +++  + +PTPPP
Sbjct: 2177 RNSNNAAPSKKKTLSPTIAKRSLVPGGSGVRLPAKKKPTPPP 2218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,615,075
Number of Sequences: 53049
Number of extensions: 562787
Number of successful extensions: 1472
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)