Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0098.Seq
         (426 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       27   0.21 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   1.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   1.1  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    25   1.5  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   3.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   4.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.0  
AY146725-1|AAO12085.1|  155|Anopheles gambiae odorant-binding pr...    22   7.9  
AY146724-1|AAO12084.1|  151|Anopheles gambiae odorant-binding pr...    22   7.9  
AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding pr...    22   7.9  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    22   7.9  

>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 0.21
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 391 RLPTVSAREHTRCYVHVICSKTDNTVVRVQPGCRDL 284
           R+ T S      CY H  C+     + RV   CRD+
Sbjct: 336 RISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDI 371


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 11/58 (18%)
 Frame = -2

Query: 320 HSGTRPARVPRPHHPQLPKPDPE-----------RPYILNKTFRKSHSNISKRSNIVP 180
           H+G      P P HPQ   P P+           RPY ++K+ R   SN S  +  +P
Sbjct: 193 HTGLHHYYQPSPSHPQPIVPQPQRASLERRDSLFRPYDISKSPRLCSSNGSSSATPLP 250


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 11/58 (18%)
 Frame = -2

Query: 320 HSGTRPARVPRPHHPQLPKPDPE-----------RPYILNKTFRKSHSNISKRSNIVP 180
           H+G      P P HPQ   P P+           RPY ++K+ R   SN S  +  +P
Sbjct: 193 HTGLHHYYQPSPSHPQPIVPQPQRASLERRDSLFRPYDISKSPRLCSSNGSSSATPLP 250


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 210 AM*FSKCFIQYVRTLWVRLG*LGVVRSRHPG 302
           A+  S C+   VRT+W +   LG +   H G
Sbjct: 400 ALIISACYAVIVRTIWAKGTILGPIDRTHNG 430


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = -2

Query: 320 HSGTRPA--RVPRPHHPQLPKPDPERPYILNKTFRKSHSNISKRSN 189
           HSG+     RVPR H    P   P  P   +    + HS ++  SN
Sbjct: 52  HSGSSSLYDRVPREHATSSPYHAPPSPANSHYEPMECHSAVNSSSN 97


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -2

Query: 284 HHPQLPKPDPERPYILNKTFRKSHSNISKRSNIVPY 177
           HH +L     E   I +     SH +I  R   VPY
Sbjct: 711 HHLELAPAKTEMTIISSLKHPPSHISIDVRGTAVPY 746


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 157  PILNRSDSRKMCSAYSLIS 101
            PILNR +  K CS    IS
Sbjct: 1155 PILNRKEKPKSCSVCRQIS 1173


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 42  GSGGAGWSLAHRDRPQE 92
           G GG G    HRDR +E
Sbjct: 227 GGGGGGRDRDHRDRDRE 243


>AY146725-1|AAO12085.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP6 protein.
          Length = 155

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +3

Query: 126 ILRESDR--FKIGLSRCQLIRNDIRTF*NIAM*FSKCFIQ 239
           IL E+ R  F++GL  C+   +D      +A    KCF +
Sbjct: 108 ILPENYRQPFRLGLDSCRTAADDATDRCEVAYILLKCFFK 147


>AY146724-1|AAO12084.1|  151|Anopheles gambiae odorant-binding
           protein AgamOBP18 protein.
          Length = 151

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +3

Query: 126 ILRESDR--FKIGLSRCQLIRNDIRTF*NIAM*FSKCFIQ 239
           IL E+ R  F++GL  C+   +D      +A    KCF +
Sbjct: 104 ILPENYRQPFRLGLDSCRTAADDATDRCEVAYILLKCFFK 143


>AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding
           protein protein.
          Length = 155

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +3

Query: 126 ILRESDR--FKIGLSRCQLIRNDIRTF*NIAM*FSKCFIQ 239
           IL E+ R  F++GL  C+   +D      +A    KCF +
Sbjct: 108 ILPETYRQPFRLGLDSCRTAADDATDRCEVAYILLKCFFK 147


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 72  EQGSSQRHHCPFQFRTICDD 13
           +Q  S  HH P QF+T   D
Sbjct: 324 QQYHSHPHHTPVQFKTELHD 343


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,426
Number of Sequences: 2352
Number of extensions: 8358
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)