Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0098.Seq
(426 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein. 30 3.8
AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiqui... 30 3.8
AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiqui... 30 3.8
AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiqui... 30 3.8
AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiqui... 30 3.8
AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligas... 30 3.8
AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting ... 30 3.8
AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligas... 30 3.8
D38552-1|BAA07555.1| 645|Homo sapiens KIAA0073 protein. 29 5.0
BC015385-1|AAH15385.1| 646|Homo sapiens peptidylprolyl isomeras... 29 5.0
BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein. 29 6.6
BC050032-1|AAH50032.1| 681|Homo sapiens TXNRD3 protein protein. 29 6.6
BC030028-1|AAH30028.1| 678|Homo sapiens TXNRD3 protein protein. 29 6.6
BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp prot... 29 6.6
AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens ... 29 6.6
AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp prot... 29 6.6
AF171055-1|AAD51325.1| 579|Homo sapiens thioredoxin reductase T... 29 6.6
AF133519-1|AAD39929.1| 577|Homo sapiens thioredoxin reductase 3... 29 6.6
AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product pr... 29 6.6
BC124558-1|AAI24559.2| 210|Homo sapiens zinc finger protein 586... 29 8.7
AK000077-1|BAA90930.1| 252|Homo sapiens protein ( Homo sapiens ... 29 8.7
>BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein.
Length = 903
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 320 HSGTRPARVPRPHHPQLPKPDPERPYILN 234
+ G +P+R PRP P P P P RP +N
Sbjct: 245 NGGFKPSRPPRPSRP--PPPTPRRPASVN 271
>AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 903
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 320 HSGTRPARVPRPHHPQLPKPDPERPYILN 234
+ G +P+R PRP P P P P RP +N
Sbjct: 245 NGGFKPSRPPRPSRP--PPPTPRRPASVN 271
>AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 862
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 320 HSGTRPARVPRPHHPQLPKPDPERPYILN 234
+ G +P+R PRP P P P P RP +N
Sbjct: 204 NGGFKPSRPPRPSRP--PPPTPRRPASVN 230
>AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 903
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 320 HSGTRPARVPRPHHPQLPKPDPERPYILN 234
+ G +P+R PRP P P P P RP +N
Sbjct: 245 NGGFKPSRPPRPSRP--PPPTPRRPASVN 271
>AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 862
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 320 HSGTRPARVPRPHHPQLPKPDPERPYILN 234
+ G +P+R PRP P P P P RP +N
Sbjct: 204 NGGFKPSRPPRPSRP--PPPTPRRPASVN 230
>AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligase
ITCH protein.
Length = 862
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 320 HSGTRPARVPRPHHPQLPKPDPERPYILN 234
+ G +P+R PRP P P P P RP +N
Sbjct: 204 NGGFKPSRPPRPSRP--PPPTPRRPASVN 230
>AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting
protein 4 protein.
Length = 739
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 320 HSGTRPARVPRPHHPQLPKPDPERPYILN 234
+ G +P+R PRP P P P P RP +N
Sbjct: 81 NGGFKPSRPPRPSRP--PPPTPRRPASVN 107
>AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligase
Itch protein.
Length = 862
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 320 HSGTRPARVPRPHHPQLPKPDPERPYILN 234
+ G +P+R PRP P P P P RP +N
Sbjct: 204 NGGFKPSRPPRPSRP--PPPTPRRPASVN 230
>D38552-1|BAA07555.1| 645|Homo sapiens KIAA0073 protein.
Length = 645
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 397 VNRLPTVSARE----HTRCYVHVICSKTDNTVVRVQPGCRDLTTPSYPSLTQSVLTY*IK 230
++ LP+ S E H HV+C+KTD + G + + + + +K
Sbjct: 73 LDNLPSASMYERSYMHRDVITHVVCTKTDFIITASHDG----HVKFWKKIEEGIEF--VK 126
Query: 229 HFENHIAIFQNVLIS 185
HF +H+ + +++ +S
Sbjct: 127 HFRSHLGVIESIAVS 141
>BC015385-1|AAH15385.1| 646|Homo sapiens peptidylprolyl isomerase
domain and WD repeat containing 1 protein.
Length = 646
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 397 VNRLPTVSARE----HTRCYVHVICSKTDNTVVRVQPGCRDLTTPSYPSLTQSVLTY*IK 230
++ LP+ S E H HV+C+KTD + G + + + + +K
Sbjct: 74 LDNLPSASMYERSYMHRDVITHVVCTKTDFIITASHDG----HVKFWKKIEEGIEF--VK 127
Query: 229 HFENHIAIFQNVLIS 185
HF +H+ + +++ +S
Sbjct: 128 HFRSHLGVIESIAVS 142
>BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 84 PQEISQLIKL*AEHILRESDRFKIGLSRCQLIRNDIRTF 200
P I L + I+++ K+GL+RC L + ++RTF
Sbjct: 162 PSNAKAAINLQDDPIIQKYGSKKVGLTRCLLTKEEMRTF 200
>BC050032-1|AAH50032.1| 681|Homo sapiens TXNRD3 protein protein.
Length = 681
Score = 29.1 bits (62), Expect = 6.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 382 TVSAREHTRCYVHVICSKTDN 320
TV+ RE+ CY +IC+K D+
Sbjct: 596 TVAGRENNTCYAKIICNKFDH 616
>BC030028-1|AAH30028.1| 678|Homo sapiens TXNRD3 protein protein.
Length = 678
Score = 29.1 bits (62), Expect = 6.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 382 TVSAREHTRCYVHVICSKTDN 320
TV+ RE+ CY +IC+K D+
Sbjct: 593 TVAGRENNTCYAKIICNKFDH 613
>BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 84 PQEISQLIKL*AEHILRESDRFKIGLSRCQLIRNDIRTF 200
P I L + I+++ K+GL+RC L + ++RTF
Sbjct: 162 PSNAKAAINLQDDPIIQKYGSKKVGLTRCLLTKEEMRTF 200
>AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens
cDNA FLJ32692 fis, clone TESTI2000238. ).
Length = 443
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 84 PQEISQLIKL*AEHILRESDRFKIGLSRCQLIRNDIRTF 200
P I L + I+++ K+GL+RC L + ++RTF
Sbjct: 162 PSNAKAAINLQDDPIIQKYGSKKVGLTRCLLTKEEMRTF 200
>AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 84 PQEISQLIKL*AEHILRESDRFKIGLSRCQLIRNDIRTF 200
P I L + I+++ K+GL+RC L + ++RTF
Sbjct: 162 PSNAKAAINLQDDPIIQKYGSKKVGLTRCLLTKEEMRTF 200
>AF171055-1|AAD51325.1| 579|Homo sapiens thioredoxin reductase TR2
protein.
Length = 579
Score = 29.1 bits (62), Expect = 6.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 382 TVSAREHTRCYVHVICSKTDN 320
TV+ RE+ CY +IC+K D+
Sbjct: 492 TVAGRENNTCYAKIICNKFDH 512
>AF133519-1|AAD39929.1| 577|Homo sapiens thioredoxin reductase 3
protein.
Length = 577
Score = 29.1 bits (62), Expect = 6.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 382 TVSAREHTRCYVHVICSKTDN 320
TV+ RE+ CY +IC+K D+
Sbjct: 490 TVAGRENNTCYAKIICNKFDH 510
>AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product
protein.
Length = 547
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 84 PQEISQLIKL*AEHILRESDRFKIGLSRCQLIRNDIRTF 200
P I L + I+++ K+GL+RC L + ++RTF
Sbjct: 58 PSNAKAAINLQDDPIIQKYGSKKVGLTRCLLTKEEMRTF 96
>BC124558-1|AAI24559.2| 210|Homo sapiens zinc finger protein 586
protein.
Length = 210
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 77 PMSKAPASATTAHFNFEQSVM 15
P+ K+P S TT F EQSVM
Sbjct: 144 PLLKSPVSLTTGKFTLEQSVM 164
>AK000077-1|BAA90930.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ20070 fis, clone COL01830. ).
Length = 252
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 77 PMSKAPASATTAHFNFEQSVM 15
P+ K+P S TT F EQSVM
Sbjct: 186 PLLKSPVSLTTGKFTLEQSVM 206
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,869,144
Number of Sequences: 237096
Number of extensions: 1119742
Number of successful extensions: 4252
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4245
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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