Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0098.Seq
         (426 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L13255-1|AAC37184.1|  359|Drosophila melanogaster lachesin protein.    29   2.6  
BT003177-1|AAO24932.1|  252|Drosophila melanogaster RH65858p pro...    29   2.6  
AY051829-1|AAK93253.1|  359|Drosophila melanogaster LD33460p pro...    29   2.6  
AE013599-1499|AAM68689.1|  252|Drosophila melanogaster CG12369-P...    29   2.6  
AE013599-1498|AAF58506.1|  359|Drosophila melanogaster CG12369-P...    29   2.6  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    28   4.5  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    28   4.5  
AY131211-1|AAM97280.1|  608|Drosophila melanogaster scaffold pro...    28   6.0  
AE014297-3264|AAF56090.3|  608|Drosophila melanogaster CG33193-P...    28   6.0  
M57496-1|AAA28983.1|  993|Drosophila melanogaster teashirt protein.    27   7.9  
M33998-2|AAA28579.1|  382|Drosophila melanogaster protein ( D.me...    27   7.9  
M33998-1|AAA28578.1|  385|Drosophila melanogaster protein ( D.me...    27   7.9  
M23233-1|AAA28917.1|  385|Drosophila melanogaster protein ( D.me...    27   7.9  
BT015201-1|AAT94430.1|  683|Drosophila melanogaster RE67261p pro...    27   7.9  
AY069854-1|AAL39999.1|  607|Drosophila melanogaster SD10307p pro...    27   7.9  
AY058572-1|AAL13801.1|  385|Drosophila melanogaster LD26182p pro...    27   7.9  
AE014134-3546|AAS64735.1|  885|Drosophila melanogaster CG1374-PB...    27   7.9  
AE014134-3545|AAF57236.2|  954|Drosophila melanogaster CG1374-PA...    27   7.9  
AE013599-3743|AAF47107.2|  382|Drosophila melanogaster CG2835-PC...    27   7.9  
AE013599-3742|AAF47108.2|  382|Drosophila melanogaster CG2835-PA...    27   7.9  
AE013599-3741|AAM68282.2|  385|Drosophila melanogaster CG2835-PB...    27   7.9  

>L13255-1|AAC37184.1|  359|Drosophila melanogaster lachesin protein.
          Length = 359

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 218 IFEMFYSICKDALGQAWVAGGGEVAA 295
           +FE    +C  A GQA++AG  +V+A
Sbjct: 318 LFETIIPVCPPACGQAYIAGAEDVSA 343


>BT003177-1|AAO24932.1|  252|Drosophila melanogaster RH65858p
           protein.
          Length = 252

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 218 IFEMFYSICKDALGQAWVAGGGEVAA 295
           +FE    +C  A GQA++AG  +V+A
Sbjct: 211 LFETIIPVCPPACGQAYIAGAEDVSA 236


>AY051829-1|AAK93253.1|  359|Drosophila melanogaster LD33460p
           protein.
          Length = 359

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 218 IFEMFYSICKDALGQAWVAGGGEVAA 295
           +FE    +C  A GQA++AG  +V+A
Sbjct: 318 LFETIIPVCPPACGQAYIAGAEDVSA 343


>AE013599-1499|AAM68689.1|  252|Drosophila melanogaster CG12369-PB,
           isoform B protein.
          Length = 252

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 218 IFEMFYSICKDALGQAWVAGGGEVAA 295
           +FE    +C  A GQA++AG  +V+A
Sbjct: 211 LFETIIPVCPPACGQAYIAGAEDVSA 236


>AE013599-1498|AAF58506.1|  359|Drosophila melanogaster CG12369-PA,
           isoform A protein.
          Length = 359

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 218 IFEMFYSICKDALGQAWVAGGGEVAA 295
           +FE    +C  A GQA++AG  +V+A
Sbjct: 318 LFETIIPVCPPACGQAYIAGAEDVSA 343


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 314 GTRPAR-VPRPHHPQLPKPDPERP 246
           G  PA+  P+P  PQ P+P P RP
Sbjct: 247 GPGPAQPAPQPPRPQPPRPQPPRP 270


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 314 GTRPAR-VPRPHHPQLPKPDPERP 246
           G  PA+  P+P  PQ P+P P RP
Sbjct: 247 GPGPAQPAPQPPRPQPPRPQPPRP 270


>AY131211-1|AAM97280.1|  608|Drosophila melanogaster scaffold
           protein salvador protein.
          Length = 608

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 320 HSGTRPARVPRPHHPQLPKPDPERPYILNKTFRKSHSNISKRSN 189
           HS + P  +P P HP +    P  P+     FR S + +S+ S+
Sbjct: 107 HSHSHPHSLPHPSHPHVRSHPPLPPH----QFRASSNQLSQNSS 146


>AE014297-3264|AAF56090.3|  608|Drosophila melanogaster CG33193-PA
           protein.
          Length = 608

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 320 HSGTRPARVPRPHHPQLPKPDPERPYILNKTFRKSHSNISKRSN 189
           HS + P  +P P HP +    P  P+     FR S + +S+ S+
Sbjct: 107 HSHSHPHSLPHPSHPHVRSHPPLPPH----QFRASSNQLSQNSS 146


>M57496-1|AAA28983.1|  993|Drosophila melanogaster teashirt protein.
          Length = 993

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 314 GTRPARVPRPHHPQLPKPDPERPYILNKTFRKSHSNISKRSNI 186
           G  P+  P+P H     P P + + L K    S SN S  +N+
Sbjct: 387 GNLPSNNPQPQHHHPTPPPPPQNHNLRKHSSGSASNHSPSANV 429


>M33998-2|AAA28579.1|  382|Drosophila melanogaster protein (
           D.melanogaster guaninenucleotide-binding protein (Gs)
           alpha subunit gene, exons5,6,7,8 and 9. ).
          Length = 382

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 391 RLPTVSAREHTRCYVHVICSKTDNTVVRVQPGCRDL 284
           R+ T S      CY H  C+     + RV   CRD+
Sbjct: 335 RISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDI 370


>M33998-1|AAA28578.1|  385|Drosophila melanogaster protein (
           D.melanogaster guaninenucleotide-binding protein (Gs)
           alpha subunit gene, exons5,6,7,8 and 9. ).
          Length = 385

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 391 RLPTVSAREHTRCYVHVICSKTDNTVVRVQPGCRDL 284
           R+ T S      CY H  C+     + RV   CRD+
Sbjct: 338 RISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDI 373


>M23233-1|AAA28917.1|  385|Drosophila melanogaster protein (
           D.melagaster stimulatoryG protein alpha subunit,
           complete cds. ).
          Length = 385

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 391 RLPTVSAREHTRCYVHVICSKTDNTVVRVQPGCRDL 284
           R+ T S      CY H  C+     + RV   CRD+
Sbjct: 338 RISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDI 373


>BT015201-1|AAT94430.1|  683|Drosophila melanogaster RE67261p
           protein.
          Length = 683

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 314 GTRPARVPRPHHPQLPKPDPERPYILNKTFRKSHSNISKRSNI 186
           G  P+  P+P H     P P + + L K    S SN S  +N+
Sbjct: 116 GNLPSNNPQPQHHHPTPPPPPQNHNLRKHSSGSASNHSPSANV 158


>AY069854-1|AAL39999.1|  607|Drosophila melanogaster SD10307p
           protein.
          Length = 607

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 320 HSGTRPARVPRPHHPQLPKPDPERPYILNKTFRKSHSNISKRSN 189
           HS + P  +P P HP +    P  P+     FR S + +S+ S+
Sbjct: 107 HSHSHPHSLPHPAHPHVRSHPPLPPH----QFRASSNQLSQNSS 146


>AY058572-1|AAL13801.1|  385|Drosophila melanogaster LD26182p
           protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 391 RLPTVSAREHTRCYVHVICSKTDNTVVRVQPGCRDL 284
           R+ T S      CY H  C+     + RV   CRD+
Sbjct: 338 RISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDI 373


>AE014134-3546|AAS64735.1|  885|Drosophila melanogaster CG1374-PB,
           isoform B protein.
          Length = 885

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 314 GTRPARVPRPHHPQLPKPDPERPYILNKTFRKSHSNISKRSNI 186
           G  P+  P+P H     P P + + L K    S SN S  +N+
Sbjct: 318 GNLPSNNPQPQHHHPTPPPPPQNHNLRKHSSGSASNHSPSANV 360


>AE014134-3545|AAF57236.2|  954|Drosophila melanogaster CG1374-PA,
           isoform A protein.
          Length = 954

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 314 GTRPARVPRPHHPQLPKPDPERPYILNKTFRKSHSNISKRSNI 186
           G  P+  P+P H     P P + + L K    S SN S  +N+
Sbjct: 387 GNLPSNNPQPQHHHPTPPPPPQNHNLRKHSSGSASNHSPSANV 429


>AE013599-3743|AAF47107.2|  382|Drosophila melanogaster CG2835-PC,
           isoform C protein.
          Length = 382

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 391 RLPTVSAREHTRCYVHVICSKTDNTVVRVQPGCRDL 284
           R+ T S      CY H  C+     + RV   CRD+
Sbjct: 335 RISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDI 370


>AE013599-3742|AAF47108.2|  382|Drosophila melanogaster CG2835-PA,
           isoform A protein.
          Length = 382

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 391 RLPTVSAREHTRCYVHVICSKTDNTVVRVQPGCRDL 284
           R+ T S      CY H  C+     + RV   CRD+
Sbjct: 335 RISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDI 370


>AE013599-3741|AAM68282.2|  385|Drosophila melanogaster CG2835-PB,
           isoform B protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 391 RLPTVSAREHTRCYVHVICSKTDNTVVRVQPGCRDL 284
           R+ T S      CY H  C+     + RV   CRD+
Sbjct: 338 RISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDI 373


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,519,075
Number of Sequences: 53049
Number of extensions: 370382
Number of successful extensions: 1607
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)