Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0097.Seq
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ912404-1|ABK33662.1|  172|Homo sapiens calcium-sensing recepto...    30   9.6  
BC011571-1|AAH11571.1|  903|Homo sapiens ITCH protein protein.         30   9.6  
AL356299-4|CAI17959.1|  903|Homo sapiens itchy homolog E3 ubiqui...    30   9.6  
AL356299-3|CAI17960.1|  862|Homo sapiens itchy homolog E3 ubiqui...    30   9.6  
AL109923-6|CAI21458.1|  903|Homo sapiens itchy homolog E3 ubiqui...    30   9.6  
AL109923-5|CAI21459.1|  862|Homo sapiens itchy homolog E3 ubiqui...    30   9.6  
AF095745-1|AAK39399.1|  862|Homo sapiens ubiquitin protein ligas...    30   9.6  
AF071111-1|AAD20804.1|   95|Homo sapiens unknown protein.              30   9.6  
AF038564-1|AAC04845.1|  739|Homo sapiens atrophin-1 interacting ...    30   9.6  
AB056663-1|BAB39389.1|  862|Homo sapiens ubiquitin protein ligas...    30   9.6  

>DQ912404-1|ABK33662.1|  172|Homo sapiens calcium-sensing receptor
           protein.
          Length = 172

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 20/58 (34%), Positives = 32/58 (55%)
 Frame = +2

Query: 287 VAAPGLDAYHCVISFTENHMYVTSSVFTSAHGWQPVDIVDCAGDARVLTDQQCANLKK 460
           V  P +D  H  IS+   ++Y+  +V++SAH  Q  DI  C     + T+  CA++KK
Sbjct: 117 VETPYIDYTHLRISY---NVYL--AVYSSAHALQ--DIYTCLPGRGLFTNGSCADIKK 167


>BC011571-1|AAH11571.1|  903|Homo sapiens ITCH protein protein.
          Length = 903

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 320 HSGTRPARVPRPHHPQPXKPDPERPYILN 234
           + G +P+R PRP  P P  P P RP  +N
Sbjct: 245 NGGFKPSRPPRPSRPPP--PTPRRPASVN 271


>AL356299-4|CAI17959.1|  903|Homo sapiens itchy homolog E3 ubiquitin
           protein ligase (mouse) protein.
          Length = 903

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 320 HSGTRPARVPRPHHPQPXKPDPERPYILN 234
           + G +P+R PRP  P P  P P RP  +N
Sbjct: 245 NGGFKPSRPPRPSRPPP--PTPRRPASVN 271


>AL356299-3|CAI17960.1|  862|Homo sapiens itchy homolog E3 ubiquitin
           protein ligase (mouse) protein.
          Length = 862

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 320 HSGTRPARVPRPHHPQPXKPDPERPYILN 234
           + G +P+R PRP  P P  P P RP  +N
Sbjct: 204 NGGFKPSRPPRPSRPPP--PTPRRPASVN 230


>AL109923-6|CAI21458.1|  903|Homo sapiens itchy homolog E3 ubiquitin
           protein ligase (mouse) protein.
          Length = 903

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 320 HSGTRPARVPRPHHPQPXKPDPERPYILN 234
           + G +P+R PRP  P P  P P RP  +N
Sbjct: 245 NGGFKPSRPPRPSRPPP--PTPRRPASVN 271


>AL109923-5|CAI21459.1|  862|Homo sapiens itchy homolog E3 ubiquitin
           protein ligase (mouse) protein.
          Length = 862

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 320 HSGTRPARVPRPHHPQPXKPDPERPYILN 234
           + G +P+R PRP  P P  P P RP  +N
Sbjct: 204 NGGFKPSRPPRPSRPPP--PTPRRPASVN 230


>AF095745-1|AAK39399.1|  862|Homo sapiens ubiquitin protein ligase
           ITCH protein.
          Length = 862

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 320 HSGTRPARVPRPHHPQPXKPDPERPYILN 234
           + G +P+R PRP  P P  P P RP  +N
Sbjct: 204 NGGFKPSRPPRPSRPPP--PTPRRPASVN 230


>AF071111-1|AAD20804.1|   95|Homo sapiens unknown protein.
          Length = 95

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 317 SGTRPARVPRPHHPQPXKPDPE 252
           S + P  +P+PH P P  P+PE
Sbjct: 41  SHSSPTGLPKPHSPMPSPPEPE 62


>AF038564-1|AAC04845.1|  739|Homo sapiens atrophin-1 interacting
           protein 4 protein.
          Length = 739

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 320 HSGTRPARVPRPHHPQPXKPDPERPYILN 234
           + G +P+R PRP  P P  P P RP  +N
Sbjct: 81  NGGFKPSRPPRPSRPPP--PTPRRPASVN 107


>AB056663-1|BAB39389.1|  862|Homo sapiens ubiquitin protein ligase
           Itch protein.
          Length = 862

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 320 HSGTRPARVPRPHHPQPXKPDPERPYILN 234
           + G +P+R PRP  P P  P P RP  +N
Sbjct: 204 NGGFKPSRPPRPSRPPP--PTPRRPASVN 230


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,001,006
Number of Sequences: 237096
Number of extensions: 1759817
Number of successful extensions: 4699
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4664
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)