Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0097.Seq
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M57496-1|AAA28983.1|  993|Drosophila melanogaster teashirt protein.    31   1.2  
BT015201-1|AAT94430.1|  683|Drosophila melanogaster RE67261p pro...    31   1.2  
AE014134-3546|AAS64735.1|  885|Drosophila melanogaster CG1374-PB...    31   1.2  
AE014134-3545|AAF57236.2|  954|Drosophila melanogaster CG1374-PA...    31   1.2  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   6.4  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   6.4  

>M57496-1|AAA28983.1|  993|Drosophila melanogaster teashirt protein.
          Length = 993

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 314 GTRPARVPRPHHPQPXKPDPERPYILNKTFRKSHSNISKRSNI 186
           G  P+  P+P H  P  P P + + L K    S SN S  +N+
Sbjct: 387 GNLPSNNPQPQHHHPTPPPPPQNHNLRKHSSGSASNHSPSANV 429


>BT015201-1|AAT94430.1|  683|Drosophila melanogaster RE67261p
           protein.
          Length = 683

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 314 GTRPARVPRPHHPQPXKPDPERPYILNKTFRKSHSNISKRSNI 186
           G  P+  P+P H  P  P P + + L K    S SN S  +N+
Sbjct: 116 GNLPSNNPQPQHHHPTPPPPPQNHNLRKHSSGSASNHSPSANV 158


>AE014134-3546|AAS64735.1|  885|Drosophila melanogaster CG1374-PB,
           isoform B protein.
          Length = 885

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 314 GTRPARVPRPHHPQPXKPDPERPYILNKTFRKSHSNISKRSNI 186
           G  P+  P+P H  P  P P + + L K    S SN S  +N+
Sbjct: 318 GNLPSNNPQPQHHHPTPPPPPQNHNLRKHSSGSASNHSPSANV 360


>AE014134-3545|AAF57236.2|  954|Drosophila melanogaster CG1374-PA,
           isoform A protein.
          Length = 954

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 314 GTRPARVPRPHHPQPXKPDPERPYILNKTFRKSHSNISKRSNI 186
           G  P+  P+P H  P  P P + + L K    S SN S  +N+
Sbjct: 387 GNLPSNNPQPQHHHPTPPPPPQNHNLRKHSSGSASNHSPSANV 429


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -3

Query: 314 GTRPAR-VPRPHHPQPXKPDPERP 246
           G  PA+  P+P  PQP +P P RP
Sbjct: 247 GPGPAQPAPQPPRPQPPRPQPPRP 270


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -3

Query: 314 GTRPAR-VPRPHHPQPXKPDPERP 246
           G  PA+  P+P  PQP +P P RP
Sbjct: 247 GPGPAQPAPQPPRPQPPRPQPPRP 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,214,310
Number of Sequences: 53049
Number of extensions: 596715
Number of successful extensions: 2081
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2072
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)