Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0090.Seq
         (460 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         30   1.3  
BT021324-1|AAX33472.1|  264|Drosophila melanogaster RE08647p pro...    28   6.9  
AE014297-2161|ABC66177.1|  297|Drosophila melanogaster CG8927-PB...    28   6.9  

>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -1

Query: 244  DGFSPFDVGVHVL**WTLVPNWNNTQPYLGLFF*FIRDFADFGLLVKK*ADLTK 83
            DG  P D G+  +  + +  N +  Q +LGL   F R   DF  L K   D+ K
Sbjct: 923  DGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILK 976


>BT021324-1|AAX33472.1|  264|Drosophila melanogaster RE08647p
           protein.
          Length = 264

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 187 EQESTIKERGLQRQRAKNRLSGRGPLREPSP*SSFLGSRCRKALNRNPKGSPRFRA*R 360
           EQ+    ++   +Q A   L+G+ P+ +PSP   FL S   +     P  S RF A R
Sbjct: 94  EQQLAQAQQSQFQQAAAAFLAGQQPVEQPSPVQQFLQSDDSQPAAILPPPSSRFPAER 151


>AE014297-2161|ABC66177.1|  297|Drosophila melanogaster CG8927-PB,
           isoform B protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 187 EQESTIKERGLQRQRAKNRLSGRGPLREPSP*SSFLGSRCRKALNRNPKGSPRFRA*R 360
           EQ+    ++   +Q A   L+G+ P+ +PSP   FL S   +     P  S RF A R
Sbjct: 94  EQQLAQAQQSQFQQAAAAFLAGQQPVEQPSPVQQFLQSDDSQPAAILPPPSSRFPAER 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,342,825
Number of Sequences: 53049
Number of extensions: 369006
Number of successful extensions: 746
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)