Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0090.Seq
         (460 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g57380.1 68418.m07169 fibronectin type III domain-containing ...    31   0.37 
At4g33630.2 68417.m04778 expressed protein                             28   3.5  
At4g33630.1 68417.m04777 expressed protein                             28   3.5  
At1g64960.1 68414.m07363 expressed protein                             27   4.6  
At1g03080.1 68414.m00282 kinase interacting family protein simil...    27   4.6  
At5g12890.1 68418.m01479 UDP-glucoronosyl/UDP-glucosyl transfera...    27   6.1  
At1g73290.1 68414.m08481 serine carboxypeptidase S10 family prot...    27   6.1  
At5g24280.1 68418.m02856 expressed protein ; expression supporte...    27   8.1  
At1g09000.1 68414.m01004 NPK1-related protein kinase, putative (...    27   8.1  

>At5g57380.1 68418.m07169 fibronectin type III domain-containing
           protein / PHD finger protein-related contains Pfam
           profiles PF00041: Fibronectin type III domain, PF00628:
           PHD-finger
          Length = 600

 Score = 31.1 bits (67), Expect = 0.37
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +1

Query: 154 DRDRVECCSSLEQESTIKERGLQRQRAKNRLSGRGPLREP 273
           D+D  E CS+ E ES ++E  L +++A N++ GR  L  P
Sbjct: 434 DKDNTEHCSAGEVESELEEERLVKRKA-NKIDGRDLLVTP 472


>At4g33630.2 68417.m04778 expressed protein
          Length = 684

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 420 PSARSFRFLPFLSRHVRRLSPSSSKSGAPFRVP 322
           P +++  F P  S    RL+PSS +S  P R+P
Sbjct: 7   PPSQNLAFSPAASATSSRLTPSSKRSFYPHRLP 39


>At4g33630.1 68417.m04777 expressed protein
          Length = 684

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 420 PSARSFRFLPFLSRHVRRLSPSSSKSGAPFRVP 322
           P +++  F P  S    RL+PSS +S  P R+P
Sbjct: 7   PPSQNLAFSPAASATSSRLTPSSKRSFYPHRLP 39


>At1g64960.1 68414.m07363 expressed protein
          Length = 1168

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 301 RCRKALNRNPKGSPRF 348
           RCR  +NRNPK   RF
Sbjct: 552 RCRTLINRNPKAGARF 567


>At1g03080.1 68414.m00282 kinase interacting family protein similar to
            kinase interacting protein 1 (GI:13936326) [Petunia
            integrifolia]
          Length = 1744

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +1

Query: 142  IKRIDRDRVECCSSLEQESTIKERGLQRQRAK 237
            ++ +  + VE C +LE  ST+K+R +++ + +
Sbjct: 1340 LEGLTNELVEACKNLESRSTLKDREIEQLKGR 1371


>At5g12890.1 68418.m01479 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 488

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 176 VPVWNKSPLLKNVDSNVKGRKTVYQGVAHYVNHHPN 283
           VPVW   P+LK+ D  V G ++  + V  +++  P+
Sbjct: 248 VPVWPVGPVLKSPDKKV-GSRSTEEAVKSWLDSKPD 282


>At1g73290.1 68414.m08481 serine carboxypeptidase S10 family protein
           similar to serine carboxypeptidase I precursor
           (SP:P07519) [Hordeum vulgare]; glucose acyltransferase
           GB:AAD01263 [Solanum berthaultii]; contains Pfam
           profile: PF00450 Serine carboxypeptidase;
          Length = 438

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 201 SGLLFQTGTTLNPISVYSFDL*GILPISAYWLK 103
           SGLLF+ G     + VY+  L  ++P +  W K
Sbjct: 91  SGLLFENGPLAMKLDVYNGTLPSLVPTTYSWTK 123


>At5g24280.1 68418.m02856 expressed protein ; expression supported
           by MPSS
          Length = 1634

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 203 IVDSCSKLEQHSTLSRSILLIYKGFC 126
           I+D  SKLE  S+LS  I +I  G C
Sbjct: 691 IIDGISKLEVQSSLSLPITIIDSGKC 716


>At1g09000.1 68414.m01004 NPK1-related protein kinase, putative
           (ANP1) similar to protein kinase [Nicotiana tabacum]
           gi|456309|dbj|BAA05648; identical to cDNA NPK1-related
           protein kinase 1S GI:2342422
          Length = 666

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 145 KRIDRDRVECCSSLEQESTIKERGLQRQRAKNRLSGRG 258
           + ++R R E        S+ ++RG+ RQR K+R +  G
Sbjct: 628 QELERKRQEIMRQAGLGSSPRDRGMSRQREKSRFASPG 665


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,877,293
Number of Sequences: 28952
Number of extensions: 176803
Number of successful extensions: 378
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 762235320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)